RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 KCNB2Q92953 911 aa26.65■■□□□ 1.86
SFSWAP-204ENST00000535399 ARMC5Q96C12 935 aa26.65■■□□□ 1.86
SFSWAP-204ENST00000535399 ATP2A1O14983 1001 aa26.64■■□□□ 1.86
SFSWAP-204ENST00000535399 ZBED4O75132 1171 aa26.64■■□□□ 1.86
SFSWAP-204ENST00000535399 WDR78Q5VTH9 848 aa26.64■■□□□ 1.86
SFSWAP-204ENST00000535399 RIOX2Q8IUF8 465 aa26.64■■□□□ 1.86
SFSWAP-204ENST00000535399 IGDCC4Q8TDY8 1250 aa26.64■■□□□ 1.86
SFSWAP-204ENST00000535399 SOCS4Q8WXH5 440 aa26.64■■□□□ 1.86
SFSWAP-204ENST00000535399 USP6NLQ92738 828 aa26.64■■□□□ 1.86
SFSWAP-204ENST00000535399 SENP2Q9HC62 589 aa26.64■■□□□ 1.86
SFSWAP-204ENST00000535399 GPCPD1Q9NPB8 672 aa26.64■■□□□ 1.86
SFSWAP-204ENST00000535399 PRR12Q9ULL5 1215 aa26.64■■□□□ 1.86
SFSWAP-204ENST00000535399 SLC25A27O95847 323 aa26.63■■□□□ 1.85
SFSWAP-204ENST00000535399 FDX1P10109 184 aa26.63■■□□□ 1.85
SFSWAP-204ENST00000535399 PTPREP23469 700 aa26.63■■□□□ 1.85
SFSWAP-204ENST00000535399 HSPA4P34932 840 aa26.63■■□□□ 1.85
SFSWAP-204ENST00000535399 SLC9C1Q4G0N8 1177 aa26.63■■□□□ 1.85
SFSWAP-204ENST00000535399 SH3TC2Q8TF17 1288 aa26.63■■□□□ 1.85
SFSWAP-204ENST00000535399 NUDT12Q9BQG2 462 aa26.63■■□□□ 1.85
SFSWAP-204ENST00000535399 MROH8Q9H579 483 aa26.63■■□□□ 1.85
SFSWAP-204ENST00000535399 CWC22Q9HCG8 908 aaKnown RBP26.63■■□□□ 1.85
SFSWAP-204ENST00000535399 DOCK3Q8IZD9 2030 aa26.62■■□□□ 1.85
SFSWAP-204ENST00000535399 SLC15A5A6NIM6 579 aa26.62■■□□□ 1.85
SFSWAP-204ENST00000535399 PRC1O43663 620 aa26.62■■□□□ 1.85
SFSWAP-204ENST00000535399 ADCY3O60266 1144 aa26.62■■□□□ 1.85
SFSWAP-204ENST00000535399 GRK4P32298 578 aa26.62■■□□□ 1.85
SFSWAP-204ENST00000535399 MCM5P33992 734 aa26.62■■□□□ 1.85
SFSWAP-204ENST00000535399 SLC16A2P36021 539 aa26.62■■□□□ 1.85
SFSWAP-204ENST00000535399 GRB14Q14449 540 aa26.62■■□□□ 1.85
SFSWAP-204ENST00000535399 SART3Q15020 963 aaKnown RBP26.62■■□□□ 1.85
SFSWAP-204ENST00000535399 TMEM67Q5HYA8 995 aa26.62■■□□□ 1.85
SFSWAP-204ENST00000535399 NCAPG2Q86XI2 1143 aa26.62■■□□□ 1.85
SFSWAP-204ENST00000535399 MTA3Q9BTC8 594 aa26.62■■□□□ 1.85
SFSWAP-204ENST00000535399 TEX13BQ9BXU2 312 aa26.62■■□□□ 1.85
SFSWAP-204ENST00000535399 RAVER2Q9HCJ3 691 aaKnown RBP26.62■■□□□ 1.85
SFSWAP-204ENST00000535399 ERICH2A1L162 156 aa26.61■■□□□ 1.85
SFSWAP-204ENST00000535399 CCDC85CA6NKD9 419 aa26.61■■□□□ 1.85
SFSWAP-204ENST00000535399 EPB41L2O43491 1005 aaKnown RBP26.61■■□□□ 1.85
SFSWAP-204ENST00000535399 ZKSCAN1P17029 563 aaPredicted RBP26.61■■□□□ 1.85
SFSWAP-204ENST00000535399 OAZ1P54368 228 aa26.61■■□□□ 1.85
SFSWAP-204ENST00000535399 WTAPQ15007 396 aa26.61■■□□□ 1.85
SFSWAP-204ENST00000535399 GPATCH4Q5T3I0 446 aaKnown RBP26.61■■□□□ 1.85
SFSWAP-204ENST00000535399 SYDE2Q5VT97 1194 aa26.61■■□□□ 1.85
SFSWAP-204ENST00000535399 CPXCR1Q8N123 301 aa26.61■■□□□ 1.85
SFSWAP-204ENST00000535399 SLAIN1Q8ND83 568 aa26.61■■□□□ 1.85
SFSWAP-204ENST00000535399 ZNF333Q96JL9 665 aa26.61■■□□□ 1.85
SFSWAP-204ENST00000535399 GPHNQ9NQX3 736 aaPredicted RBP26.61■■□□□ 1.85
SFSWAP-204ENST00000535399 RIPK3Q9Y572 518 aa26.61■■□□□ 1.85
SFSWAP-204ENST00000535399 CTDP1Q9Y5B0 961 aaPredicted RBP26.61■■□□□ 1.85
SFSWAP-204ENST00000535399 GOLGA8HP0CJ92 632 aa26.6■■□□□ 1.85
SFSWAP-204ENST00000535399 CYP2B6P20813 491 aa26.6■■□□□ 1.85
SFSWAP-204ENST00000535399 COPB2P35606 906 aa26.6■■□□□ 1.85
SFSWAP-204ENST00000535399 SNAP25P60880 206 aa26.6■■□□□ 1.85
SFSWAP-204ENST00000535399 MAP2K5Q13163 448 aa26.6■■□□□ 1.85
SFSWAP-204ENST00000535399 ADCK5Q3MIX3 580 aa26.6■■□□□ 1.85
SFSWAP-204ENST00000535399 SNRNP48Q6IEG0 339 aaKnown RBP26.6■■□□□ 1.85
SFSWAP-204ENST00000535399 PXYLP1Q8TE99 480 aa26.6■■□□□ 1.85
SFSWAP-204ENST00000535399 NEK1Q96PY6 1258 aa26.6■■□□□ 1.85
SFSWAP-204ENST00000535399 LY9Q9HBG7 655 aa26.6■■□□□ 1.85
SFSWAP-204ENST00000535399 IVNS1ABPQ9Y6Y0 642 aa26.6■■□□□ 1.85
SFSWAP-204ENST00000535399 ZNF536O15090 1300 aa26.6■■□□□ 1.85
SFSWAP-204ENST00000535399 STRNO43815 780 aa26.59■■□□□ 1.85
SFSWAP-204ENST00000535399 XRCC5P13010 732 aaKnown RBP26.59■■□□□ 1.85
SFSWAP-204ENST00000535399 ELNP15502 786 aa26.59■■□□□ 1.85
SFSWAP-204ENST00000535399 KRT32Q14532 448 aa26.59■■□□□ 1.85
SFSWAP-204ENST00000535399 NBPF11Q86T75 865 aa26.59■■□□□ 1.85
SFSWAP-204ENST00000535399 TMEM87BQ96K49 555 aa26.59■■□□□ 1.85
SFSWAP-204ENST00000535399 USP26Q9BXU7 913 aa26.59■■□□□ 1.85
SFSWAP-204ENST00000535399 SH2B2O14492 632 aaPredicted RBP26.58■■□□□ 1.85
SFSWAP-204ENST00000535399 RGS2P41220 211 aa26.58■■□□□ 1.85
SFSWAP-204ENST00000535399 ASPRV1Q53RT3 343 aa26.58■■□□□ 1.85
SFSWAP-204ENST00000535399 ABRAQ8N0Z2 381 aa26.58■■□□□ 1.85
SFSWAP-204ENST00000535399 RANBP17Q9H2T7 1088 aaKnown RBP26.58■■□□□ 1.85
SFSWAP-204ENST00000535399 SNX14Q9Y5W7 946 aa26.58■■□□□ 1.85
SFSWAP-204ENST00000535399 PLXNB2O15031 1838 aa26.58■■□□□ 1.84
SFSWAP-204ENST00000535399 PARP1P09874 1014 aaKnown RBP26.57■■□□□ 1.84
SFSWAP-204ENST00000535399 APBA2Q99767 749 aa26.57■■□□□ 1.84
SFSWAP-204ENST00000535399 UBA5Q9GZZ9 404 aa26.57■■□□□ 1.84
SFSWAP-204ENST00000535399 CAPN15O75808 1086 aa26.56■■□□□ 1.84
SFSWAP-204ENST00000535399 HOXC6P09630 235 aa26.56■■□□□ 1.84
SFSWAP-204ENST00000535399 ADORA2AP29274 412 aa26.56■■□□□ 1.84
SFSWAP-204ENST00000535399 EXOSC10Q01780 885 aaKnown RBP26.56■■□□□ 1.84
SFSWAP-204ENST00000535399 TROAPQ12815 778 aa26.56■■□□□ 1.84
SFSWAP-204ENST00000535399 CCDC174Q6PII3 467 aa26.56■■□□□ 1.84
SFSWAP-204ENST00000535399 AGBL1Q96MI9 1066 aa26.56■■□□□ 1.84
SFSWAP-204ENST00000535399 LRRC2Q9BYS8 371 aa26.56■■□□□ 1.84
SFSWAP-204ENST00000535399 CPVLQ9H3G5 476 aa26.56■■□□□ 1.84
SFSWAP-204ENST00000535399 COL11A1P12107 1806 aaPredicted RBP26.55■■□□□ 1.84
SFSWAP-204ENST00000535399 CENPFP49454 3210 aa26.55■■□□□ 1.84
SFSWAP-204ENST00000535399 FCER1AP12319 257 aa26.55■■□□□ 1.84
SFSWAP-204ENST00000535399 SLC4A3P48751 1232 aa26.55■■□□□ 1.84
SFSWAP-204ENST00000535399 DHX32Q7L7V1 743 aaKnown RBP26.55■■□□□ 1.84
SFSWAP-204ENST00000535399 STAG2Q8N3U4 1231 aa26.55■■□□□ 1.84
SFSWAP-204ENST00000535399 TRIB2Q92519 343 aa26.55■■□□□ 1.84
SFSWAP-204ENST00000535399 MMP19Q99542 508 aa26.55■■□□□ 1.84
SFSWAP-204ENST00000535399 WDR19Q8NEZ3 1342 aa26.55■■□□□ 1.84
SFSWAP-204ENST00000535399 COBLO75128 1261 aa26.54■■□□□ 1.84
SFSWAP-204ENST00000535399 INHAP05111 366 aa26.54■■□□□ 1.84
SFSWAP-204ENST00000535399 LIFRP42702 1097 aa26.54■■□□□ 1.84
SFSWAP-204ENST00000535399 GRM4Q14833 912 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms