RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 RNF168Q8IYW5 571 aaPredicted RBP5.9□□□□□ -1.46
SNHG1-201ENST00000535076 CHCHD4Q8N4Q1 142 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 TRIML1Q8N9V2 468 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 OR8K1Q8NGG5 319 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 SVIPQ8NHG7 77 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 B4GALNT2Q8NHY0 566 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 CLP1Q92989 425 aaKnown RBP5.9□□□□□ -1.46
SNHG1-201ENST00000535076 SLC35B4Q969S0 331 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 VTI1AQ96AJ9 217 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 CENPTQ96BT3 561 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 CDHR1Q96JP9 859 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 SLC39A3Q9BRY0 314 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 KRTAP4-6Q9BYQ5 205 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 TSGA10Q9BZW7 698 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 UBE2OQ9C0C9 1292 aaKnown RBP5.9□□□□□ -1.46
SNHG1-201ENST00000535076 BHMT2Q9H2M3 363 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 VCX3BQ9H321 246 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 IGFLR1Q9H665 355 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 ZNHIT6Q9NWK9 470 aaKnown RBP5.9□□□□□ -1.46
SNHG1-201ENST00000535076 SEL1LQ9UBV2 794 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 SERPINA10Q9UK55 444 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 TMED5Q9Y3A6 229 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 RTCBQ9Y3I0 505 aaKnown RBP5.9□□□□□ -1.46
SNHG1-201ENST00000535076 KCNMB2Q9Y691 235 aa5.9□□□□□ -1.46
SNHG1-201ENST00000535076 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.9□□□□□ -1.46
SNHG1-201ENST00000535076 ATXN2Q99700 1313 aaKnown RBP5.9□□□□□ -1.47
SNHG1-201ENST00000535076 NLRP1Q9C000 1473 aa5.9□□□□□ -1.47
SNHG1-201ENST00000535076 CARNS1A5YM72 827 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 TMEM221A6NGB7 291 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 LIN7AO14910 233 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-201ENST00000535076 ZBTB39O15060 712 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 TTI1O43156 1089 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 PRPF40AO75400 957 aaKnown RBP5.89□□□□□ -1.47
SNHG1-201ENST00000535076 SASH3O75995 380 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 PYGLP06737 847 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 ALAS2P22557 587 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 MCM3P25205 808 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 HNRNPH1P31943 449 aaKnown RBP5.89□□□□□ -1.47
SNHG1-201ENST00000535076 GCKP35557 465 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 TRIP4Q15650 581 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-201ENST00000535076 DDB1Q16531 1140 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 CCDC57Q2TAC2 916 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 LRRC23Q53EV4 343 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-201ENST00000535076 CCDC158Q5M9N0 1113 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 CC2D1AQ6P1N0 951 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-201ENST00000535076 MTHFD1LQ6UB35 978 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 ILDR2Q71H61 639 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 ARMC9Q7Z3E5 817 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 CCDC50Q8IVM0 306 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 ARL6IP6Q8N6S5 226 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 SH3TC2Q8TF17 1288 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 MAML1Q92585 1016 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 PPP2R3CQ969Q6 453 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 VMP1Q96GC9 406 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 MAML3Q96JK9 1138 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 ALS2CR12Q96Q35 445 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 RUFY1Q96T51 708 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 NAP1L4Q99733 375 aaKnown RBP5.89□□□□□ -1.47
SNHG1-201ENST00000535076 LRRC27Q9C0I9 530 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 MRPL46Q9H2W6 279 aaKnown RBP5.89□□□□□ -1.47
SNHG1-201ENST00000535076 SEPT10Q9P0V9 454 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 HDAC6Q9UBN7 1215 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 SEPT3Q9UH03 358 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 XPO7Q9UIA9 1087 aaKnown RBP5.89□□□□□ -1.47
SNHG1-201ENST00000535076 CROTQ9UKG9 612 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 NCOA2Q15596 1464 aa5.89□□□□□ -1.47
SNHG1-201ENST00000535076 LRRC10BA6NIK2 292 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 MAP3K6O95382 1288 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 TUBB4AP04350 444 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 TSPY4P0CV99 314 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 TSPY10P0CW01 314 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 MYCLP1P12525 358 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-201ENST00000535076 FERP16591 822 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 CD53P19397 219 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 PSMA3P25788 255 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 ERCC5P28715 1186 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-201ENST00000535076 TCF7P36402 384 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-201ENST00000535076 PIK3CAP42336 1068 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 IGBP1P78318 339 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 PHEXP78562 749 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 MLLT1Q03111 559 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-201ENST00000535076 POU5F1BQ06416 359 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 KCTD2Q14681 263 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 MAPRE1Q15691 268 aaKnown RBP5.88□□□□□ -1.47
SNHG1-201ENST00000535076 USH1GQ495M9 461 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 AKNAD1Q5T1N1 836 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 ANKRD45Q5TZF3 282 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 EMC10Q5UCC4 262 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 CWF19L1Q69YN2 538 aaKnown RBP5.88□□□□□ -1.47
SNHG1-201ENST00000535076 C16orf46Q6P387 395 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 DAAM2Q86T65 1068 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 TMEM110Q86TL2 294 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 ALYREFQ86V81 257 aaKnown RBP5.88□□□□□ -1.47
SNHG1-201ENST00000535076 BRSK2Q8IWQ3 736 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 RGL4Q8IZJ4 473 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 KIAA1524Q8TCG1 905 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 TRPC4APQ8TEL6 797 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 NUDT8Q8WV74 236 aa5.88□□□□□ -1.47
SNHG1-201ENST00000535076 N4BP2L2Q92802 583 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-201ENST00000535076 ERO1AQ96HE7 468 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms