RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 RAD21O60216 631 aa27.26■■□□□ 1.95
PTPMT1-205ENST00000534775 GNA11P29992 359 aa27.26■■□□□ 1.95
PTPMT1-205ENST00000534775 KLRC3Q07444 240 aa27.26■■□□□ 1.95
PTPMT1-205ENST00000534775 TYW1BQ6NUM6 668 aa27.26■■□□□ 1.95
PTPMT1-205ENST00000534775 KCTD1Q719H9 257 aa27.26■■□□□ 1.95
PTPMT1-205ENST00000534775 CDAN1Q8IWY9 1227 aa27.26■■□□□ 1.95
PTPMT1-205ENST00000534775 ADGRF4Q8IZF3 695 aa27.26■■□□□ 1.95
PTPMT1-205ENST00000534775 ZMYND12Q9H0C1 365 aa27.26■■□□□ 1.95
PTPMT1-205ENST00000534775 C6orf50Q9HD87 102 aa27.26■■□□□ 1.95
PTPMT1-205ENST00000534775 PNMA6FA0A0J9YX94 578 aa27.25■■□□□ 1.95
PTPMT1-205ENST00000534775 ESYT2A0FGR8 921 aa27.25■■□□□ 1.95
PTPMT1-205ENST00000534775 CUTAO60888 179 aa27.25■■□□□ 1.95
PTPMT1-205ENST00000534775 CMA1P23946 247 aa27.25■■□□□ 1.95
PTPMT1-205ENST00000534775 MARCKSP29966 332 aaPredicted RBP27.25■■□□□ 1.95
PTPMT1-205ENST00000534775 CAP2P40123 477 aa27.25■■□□□ 1.95
PTPMT1-205ENST00000534775 AXDND1Q5T1B0 1012 aaPredicted RBP27.25■■□□□ 1.95
PTPMT1-205ENST00000534775 MIGA2Q7L4E1 593 aa27.25■■□□□ 1.95
PTPMT1-205ENST00000534775 TEPSINQ96N21 525 aa27.25■■□□□ 1.95
PTPMT1-205ENST00000534775 TNMDQ9H2S6 317 aa27.25■■□□□ 1.95
PTPMT1-205ENST00000534775 GOLPH3LQ9H4A5 285 aa27.25■■□□□ 1.95
PTPMT1-205ENST00000534775 JMJD4Q9H9V9 463 aa27.25■■□□□ 1.95
PTPMT1-205ENST00000534775 PCDHB6Q9Y5E3 794 aa27.25■■□□□ 1.95
PTPMT1-205ENST00000534775 MAP3K11Q16584 847 aa27.24■■□□□ 1.95
PTPMT1-205ENST00000534775 EARS2Q5JPH6 523 aaKnown RBP27.24■■□□□ 1.95
PTPMT1-205ENST00000534775 TTBK2Q6IQ55 1244 aa27.24■■□□□ 1.95
PTPMT1-205ENST00000534775 PPP1R18Q6NYC8 613 aa27.24■■□□□ 1.95
PTPMT1-205ENST00000534775 APOBEC3FQ8IUX4 373 aaKnown RBP27.24■■□□□ 1.95
PTPMT1-205ENST00000534775 KRI1Q8N9T8 703 aaKnown RBP27.24■■□□□ 1.95
PTPMT1-205ENST00000534775 TSPY26PQ9H489 355 aa27.24■■□□□ 1.95
PTPMT1-205ENST00000534775 SH2D4AQ9H788 454 aa27.24■■□□□ 1.95
PTPMT1-205ENST00000534775 NDUFB10O96000 172 aa27.23■■□□□ 1.95
PTPMT1-205ENST00000534775 PIK3AP1Q6ZUJ8 805 aa27.23■■□□□ 1.95
PTPMT1-205ENST00000534775 ATAD5Q96QE3 1844 aa27.23■■□□□ 1.95
PTPMT1-205ENST00000534775 CCDC194A0A1B0GVG4 234 aa27.23■■□□□ 1.95
PTPMT1-205ENST00000534775 FAM205CA6NFA0 338 aa27.23■■□□□ 1.95
PTPMT1-205ENST00000534775 M0R2N6 131 aa27.23■■□□□ 1.95
PTPMT1-205ENST00000534775 KINO60870 393 aaKnown RBP27.23■■□□□ 1.95
PTPMT1-205ENST00000534775 ASNSP08243 561 aa27.23■■□□□ 1.95
PTPMT1-205ENST00000534775 ATP2B1P20020 1258 aa27.23■■□□□ 1.95
PTPMT1-205ENST00000534775 TTC38Q5R3I4 469 aa27.23■■□□□ 1.95
PTPMT1-205ENST00000534775 ENGASEQ8NFI3 743 aa27.23■■□□□ 1.95
PTPMT1-205ENST00000534775 HOOK2Q96ED9 719 aa27.23■■□□□ 1.95
PTPMT1-205ENST00000534775 MTMR8Q96EF0 704 aa27.23■■□□□ 1.95
PTPMT1-205ENST00000534775 DEFB129Q9H1M3 183 aa27.23■■□□□ 1.95
PTPMT1-205ENST00000534775 GOPCQ9HD26 462 aa27.23■■□□□ 1.95
PTPMT1-205ENST00000534775 GINM1Q9NU53 330 aa27.23■■□□□ 1.95
PTPMT1-205ENST00000534775 TMX2Q9Y320 296 aa27.23■■□□□ 1.95
PTPMT1-205ENST00000534775 SRCAPQ6ZRS2 3230 aa27.22■■□□□ 1.95
PTPMT1-205ENST00000534775 SMCO2A6NFE2 343 aa27.22■■□□□ 1.95
PTPMT1-205ENST00000534775 CTAGE5O15320 804 aa27.22■■□□□ 1.95
PTPMT1-205ENST00000534775 ZBTB5O15062 677 aa27.21■■□□□ 1.95
PTPMT1-205ENST00000534775 BMP3P12645 472 aa27.21■■□□□ 1.95
PTPMT1-205ENST00000534775 SNW1Q13573 536 aaKnown RBP27.21■■□□□ 1.95
PTPMT1-205ENST00000534775 RNF181Q9P0P0 153 aa27.21■■□□□ 1.95
PTPMT1-205ENST00000534775 PCDHA6Q9UN73 950 aa27.21■■□□□ 1.95
PTPMT1-205ENST00000534775 PCDHA8Q9Y5H6 950 aa27.21■■□□□ 1.95
PTPMT1-205ENST00000534775 ASTN2O75129 1339 aaPredicted RBP27.2■■□□□ 1.95
PTPMT1-205ENST00000534775 A0A1W2PRG0 241 aa27.2■■□□□ 1.95
PTPMT1-205ENST00000534775 SLC16A2P36021 539 aa27.2■■□□□ 1.95
PTPMT1-205ENST00000534775 FMR1NBQ8N0W7 255 aaPredicted RBP27.2■■□□□ 1.95
PTPMT1-205ENST00000534775 A0A1B0GVL5 298 aa27.19■■□□□ 1.94
PTPMT1-205ENST00000534775 USP17L10C9JJH3 530 aa27.19■■□□□ 1.94
PTPMT1-205ENST00000534775 PTPREP23469 700 aa27.19■■□□□ 1.94
PTPMT1-205ENST00000534775 DCAF15Q66K64 600 aa27.19■■□□□ 1.94
PTPMT1-205ENST00000534775 KRT25Q7Z3Z0 450 aa27.19■■□□□ 1.94
PTPMT1-205ENST00000534775 PHF20L1A8MW92 1017 aa27.19■■□□□ 1.94
PTPMT1-205ENST00000534775 YBX3P16989 372 aaKnown RBP eCLIP27.19■■□□□ 1.943e-6■■□□□ 12.9
PTPMT1-205ENST00000534775 NDUFA8P51970 172 aa27.19■■□□□ 1.94
PTPMT1-205ENST00000534775 CAMK4Q16566 473 aa27.19■■□□□ 1.94
PTPMT1-205ENST00000534775 RBM43Q6ZSC3 357 aaKnown RBP27.19■■□□□ 1.94
PTPMT1-205ENST00000534775 ZNF579Q8NAF0 562 aaKnown RBP27.19■■□□□ 1.94
PTPMT1-205ENST00000534775 FBXO2Q9UK22 296 aaPredicted RBP27.19■■□□□ 1.94
PTPMT1-205ENST00000534775 SRPRBQ9Y5M8 271 aaKnown RBP27.19■■□□□ 1.94
PTPMT1-205ENST00000534775 PPP2R3BQ9Y5P8 575 aa27.19■■□□□ 1.94
PTPMT1-205ENST00000534775 ADCY7P51828 1080 aa27.18■■□□□ 1.94
PTPMT1-205ENST00000534775 NOM1Q5C9Z4 860 aaKnown RBP27.18■■□□□ 1.94
PTPMT1-205ENST00000534775 ANGEL2Q5VTE6 544 aaKnown RBP27.18■■□□□ 1.94
PTPMT1-205ENST00000534775 RESP18Q5W5W9 173 aa27.18■■□□□ 1.94
PTPMT1-205ENST00000534775 TRPM4Q8TD43 1214 aa27.18■■□□□ 1.94
PTPMT1-205ENST00000534775 SCAF8Q9UPN6 1271 aaKnown RBP27.18■■□□□ 1.94
PTPMT1-205ENST00000534775 FAM237AA0A1B0GTK4 181 aa27.17■■□□□ 1.94
PTPMT1-205ENST00000534775 PFKFB1P16118 471 aa27.17■■□□□ 1.94
PTPMT1-205ENST00000534775 LMOD1P29536 600 aaPredicted RBP27.17■■□□□ 1.94
PTPMT1-205ENST00000534775 BTNL9Q6UXG8 535 aa27.17■■□□□ 1.94
PTPMT1-205ENST00000534775 FERMT2Q96AC1 680 aa27.17■■□□□ 1.94
PTPMT1-205ENST00000534775 UTRNP46939 3433 aa27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 ADAMTS3O15072 1205 aa27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 CTNND1O60716 968 aaKnown RBP27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 CCDC192P0DO97 292 aa27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 XRCC6P12956 609 aaKnown RBP eCLIP27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 ECE1P42892 770 aa27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 IKQ13123 557 aaPredicted RBP27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 SHC4Q6S5L8 630 aa27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 REXO1Q8N1G1 1221 aaKnown RBP27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 RASGRP4Q8TDF6 673 aa27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 ACER1Q8TDN7 264 aa27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 COA7Q96BR5 231 aa27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 EPS15P42566 896 aa27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 NONOQ15233 471 aaKnown RBP eCLIP27.16■■□□□ 1.94
PTPMT1-205ENST00000534775 ZNF174Q15697 407 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms