RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 INPP5BP32019 993 aa10.21□□□□□ -0.77
SF3B2-216ENST00000534765 ORC3Q9UBD5 711 aaPredicted RBP10.21□□□□□ -0.77
SF3B2-216ENST00000534765 SMCHD1A6NHR9 2005 aa10.21□□□□□ -0.77
SF3B2-216ENST00000534765 KIF4AO95239 1232 aa10.21□□□□□ -0.78
SF3B2-216ENST00000534765 PPP2R3AQ06190 1150 aa10.21□□□□□ -0.78
SF3B2-216ENST00000534765 NR5A1Q13285 461 aa10.21□□□□□ -0.78
SF3B2-216ENST00000534765 CNNM3Q8NE01 707 aa10.21□□□□□ -0.78
SF3B2-216ENST00000534765 MASTLQ96GX5 879 aa10.21□□□□□ -0.78
SF3B2-216ENST00000534765 DNAJC18Q9H819 358 aa10.21□□□□□ -0.78
SF3B2-216ENST00000534765 TOB1P50616 345 aaPredicted RBP10.21□□□□□ -0.78
SF3B2-216ENST00000534765 GRIPAP1Q4V328 841 aa10.21□□□□□ -0.78
SF3B2-216ENST00000534765 APOBEC3HQ6NTF7 200 aaKnown RBP10.21□□□□□ -0.78
SF3B2-216ENST00000534765 TYW1BQ6NUM6 668 aa10.21□□□□□ -0.78
SF3B2-216ENST00000534765 SH3BP5LQ7L8J4 393 aa10.21□□□□□ -0.78
SF3B2-216ENST00000534765 ZNF804AQ7Z570 1209 aa10.21□□□□□ -0.78
SF3B2-216ENST00000534765 ZNF654Q8IZM8 581 aa10.21□□□□□ -0.78
SF3B2-216ENST00000534765 SRBD1Q8N5C6 995 aaKnown RBP10.21□□□□□ -0.78
SF3B2-216ENST00000534765 EXOC4Q96A65 974 aa10.21□□□□□ -0.78
SF3B2-216ENST00000534765 FUCA2Q9BTY2 467 aa10.21□□□□□ -0.78
SF3B2-216ENST00000534765 GPR75-ASB3A0A0A6YYF3 556 aa10.2□□□□□ -0.78
SF3B2-216ENST00000534765 ERLIN1O75477 346 aa10.2□□□□□ -0.78
SF3B2-216ENST00000534765 ACTN3Q08043 901 aaPredicted RBP10.2□□□□□ -0.78
SF3B2-216ENST00000534765 LRRFIP1Q32MZ4 808 aaKnown RBP10.2□□□□□ -0.78
SF3B2-216ENST00000534765 DPP8Q6V1X1 898 aaPredicted RBP10.2□□□□□ -0.78
SF3B2-216ENST00000534765 CTCFLQ8NI51 663 aaPredicted RBP10.2□□□□□ -0.78
SF3B2-216ENST00000534765 FBXO41Q8TF61 875 aa10.2□□□□□ -0.78
SF3B2-216ENST00000534765 ZSCAN10Q96SZ4 725 aaPredicted RBP10.2□□□□□ -0.78
SF3B2-216ENST00000534765 SDF4Q9BRK5 362 aa10.2□□□□□ -0.78
SF3B2-216ENST00000534765 SH3BP1Q9Y3L3 701 aa10.2□□□□□ -0.78
SF3B2-216ENST00000534765 LIFRP42702 1097 aa10.2□□□□□ -0.78
SF3B2-216ENST00000534765 PICALMQ13492 652 aa10.2□□□□□ -0.78
SF3B2-216ENST00000534765 E2F5Q15329 346 aa10.2□□□□□ -0.78
SF3B2-216ENST00000534765 NUP133Q8WUM0 1156 aa10.2□□□□□ -0.78
SF3B2-216ENST00000534765 MED4Q9NPJ6 270 aa10.2□□□□□ -0.78
SF3B2-216ENST00000534765 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.2□□□□□ -0.78
SF3B2-216ENST00000534765 ODF2LQ9ULJ1 636 aa10.2□□□□□ -0.78
SF3B2-216ENST00000534765 WDR19Q8NEZ3 1342 aa10.2□□□□□ -0.78
SF3B2-216ENST00000534765 ZBTB43O43298 467 aa10.2□□□□□ -0.78
SF3B2-216ENST00000534765 AKAP17AQ02040 695 aaKnown RBP10.2□□□□□ -0.78
SF3B2-216ENST00000534765 KIF23Q02241 960 aaPredicted RBP10.2□□□□□ -0.78
SF3B2-216ENST00000534765 RRP1BQ14684 758 aaKnown RBP10.2□□□□□ -0.78
SF3B2-216ENST00000534765 KIAA0825Q8IV33 1275 aa10.2□□□□□ -0.78
SF3B2-216ENST00000534765 EFCAB13Q8IY85 973 aa10.2□□□□□ -0.78
SF3B2-216ENST00000534765 LLPHQ9BRT6 129 aaKnown RBP10.2□□□□□ -0.78
SF3B2-216ENST00000534765 SLC26A6Q9BXS9 759 aa10.2□□□□□ -0.78
SF3B2-216ENST00000534765 MTMR7Q9Y216 660 aa10.2□□□□□ -0.78
SF3B2-216ENST00000534765 ATF5Q9Y2D1 282 aaPredicted RBP10.2□□□□□ -0.78
SF3B2-216ENST00000534765 GAKO14976 1311 aa10.2□□□□□ -0.78
SF3B2-216ENST00000534765 BIN1O00499 593 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 CYTH3O43739 400 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 GNAT2P19087 354 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 RASA1P20936 1047 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 PTPN21Q16825 1174 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 FAM205AQ6ZU69 1335 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 C10orf71Q711Q0 1435 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 MYH8P13535 1937 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 A0A087WUV0 522 aaPredicted RBP10.19□□□□□ -0.78
SF3B2-216ENST00000534765 GOLGA8AA7E2F4 631 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 EGFRP00533 1210 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 DPEP1P16444 411 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 RBM5P52756 815 aaKnown RBP eCLIP10.19□□□□□ -0.78
SF3B2-216ENST00000534765 HSP90AA4PQ58FG1 418 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 NFXL1Q6ZNB6 911 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 PSME4Q14997 1843 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 NID2Q14112 1375 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 H3BQV1 296 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 NEMFO60524 1076 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 GOLGA8HP0CJ92 632 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 KCNA4P22459 653 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 WTAPQ15007 396 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 IFFO2Q5TF58 517 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 FMNL3Q8IVF7 1028 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 WDR66Q8TBY9 1149 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 PAIP2Q9BPZ3 127 aaKnown RBP10.19□□□□□ -0.78
SF3B2-216ENST00000534765 SAMM50Q9Y512 469 aa10.19□□□□□ -0.78
SF3B2-216ENST00000534765 BTBD18B2RXH4 712 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 PPP4CP60510 307 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 TRDNQ13061 729 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 KARSQ15046 597 aaKnown RBP10.18□□□□□ -0.78
SF3B2-216ENST00000534765 KRT40Q6A162 431 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 AOPEPQ8N6M6 819 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 FANCBQ8NB91 859 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 TRIM6Q9C030 488 aaPredicted RBP10.18□□□□□ -0.78
SF3B2-216ENST00000534765 GREB1LQ9C091 1923 aaPredicted RBP10.18□□□□□ -0.78
SF3B2-216ENST00000534765 TFAP4Q01664 338 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 DACT2Q5SW24 774 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 CDC42EP5Q6NZY7 148 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 CRACR2BQ8N4Y2 399 aaPredicted RBP10.18□□□□□ -0.78
SF3B2-216ENST00000534765 OTUD6BQ8N6M0 293 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 CEP120Q8N960 986 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 CCDC12Q8WUD4 166 aaPredicted RBP10.18□□□□□ -0.78
SF3B2-216ENST00000534765 TMEM87BQ96K49 555 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 ALG1Q9BT22 464 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 NAT10Q9H0A0 1025 aaKnown RBP10.18□□□□□ -0.78
SF3B2-216ENST00000534765 TTF2Q9UNY4 1162 aaKnown RBP10.18□□□□□ -0.78
SF3B2-216ENST00000534765 SLC12A7Q9Y666 1083 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 ECE2O60344 883 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 LONRF2Q1L5Z9 754 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 CCDC73Q6ZRK6 1079 aa10.18□□□□□ -0.78
SF3B2-216ENST00000534765 MRFAP1L1Q96HT8 127 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms