RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 PAWRQ96IZ0 340 aaKnown RBP12.3□□□□□ -0.44
CSDE1-217ENST00000534699 PFASO15067 1338 aa12.3□□□□□ -0.44
CSDE1-217ENST00000534699 H0YGN5 161 aa12.29□□□□□ -0.44
CSDE1-217ENST00000534699 TOP1P11387 765 aaKnown RBP12.29□□□□□ -0.44
CSDE1-217ENST00000534699 TSPY2A6NKD2 308 aa12.29□□□□□ -0.44
CSDE1-217ENST00000534699 SDSP20132 328 aa12.29□□□□□ -0.44
CSDE1-217ENST00000534699 STAT2P52630 851 aa12.29□□□□□ -0.44
CSDE1-217ENST00000534699 EVX2Q03828 476 aa12.29□□□□□ -0.44
CSDE1-217ENST00000534699 WDR78Q5VTH9 848 aa12.29□□□□□ -0.44
CSDE1-217ENST00000534699 OTUD7AQ8TE49 926 aaPredicted RBP12.29□□□□□ -0.44
CSDE1-217ENST00000534699 SNX17Q15036 470 aa12.28□□□□□ -0.44
CSDE1-217ENST00000534699 RUFY2Q8WXA3 655 aa12.28□□□□□ -0.44
CSDE1-217ENST00000534699 KBTBD13C9JR72 458 aa12.28□□□□□ -0.44
CSDE1-217ENST00000534699 COBLO75128 1261 aa12.28□□□□□ -0.44
CSDE1-217ENST00000534699 HSPD1P10809 573 aaKnown RBP12.28□□□□□ -0.44
CSDE1-217ENST00000534699 CCL14Q16627 93 aa12.28□□□□□ -0.44
CSDE1-217ENST00000534699 DGKHQ86XP1 1220 aa12.28□□□□□ -0.44
CSDE1-217ENST00000534699 SAMD3Q8N6K7 520 aa12.28□□□□□ -0.44
CSDE1-217ENST00000534699 TINF2Q9BSI4 451 aa12.28□□□□□ -0.44
CSDE1-217ENST00000534699 FOXP2O15409 715 aa12.27□□□□□ -0.44
CSDE1-217ENST00000534699 CCND3P30281 292 aaPredicted RBP12.27□□□□□ -0.44
CSDE1-217ENST00000534699 PLS1Q14651 629 aa12.27□□□□□ -0.44
CSDE1-217ENST00000534699 AKNAD1Q5T1N1 836 aa12.27□□□□□ -0.44
CSDE1-217ENST00000534699 TSHZ3Q63HK5 1081 aa12.27□□□□□ -0.44
CSDE1-217ENST00000534699 SEC62Q99442 399 aaKnown RBP12.27□□□□□ -0.44
CSDE1-217ENST00000534699 CNNM2Q9H8M5 875 aa12.27□□□□□ -0.44
CSDE1-217ENST00000534699 FLRT1Q9NZU1 646 aa12.27□□□□□ -0.44
CSDE1-217ENST00000534699 AKR1A1P14550 325 aa12.27□□□□□ -0.45
CSDE1-217ENST00000534699 CST5P28325 142 aaPredicted RBP12.27□□□□□ -0.45
CSDE1-217ENST00000534699 TRIM32Q13049 653 aa12.27□□□□□ -0.45
CSDE1-217ENST00000534699 SPICE1Q8N0Z3 855 aa12.27□□□□□ -0.45
CSDE1-217ENST00000534699 ESR2Q92731 530 aa12.27□□□□□ -0.45
CSDE1-217ENST00000534699 PHF24Q9UPV7 400 aa12.27□□□□□ -0.45
CSDE1-217ENST00000534699 Q9Y3F1 56 aa12.27□□□□□ -0.45
CSDE1-217ENST00000534699 WDR19Q8NEZ3 1342 aa12.26□□□□□ -0.45
CSDE1-217ENST00000534699 ASB14A6NK59 587 aa12.26□□□□□ -0.45
CSDE1-217ENST00000534699 TRIM6-TRIM34B2RNG4 842 aa12.26□□□□□ -0.45
CSDE1-217ENST00000534699 B4DLN1 442 aa12.26□□□□□ -0.45
CSDE1-217ENST00000534699 FGAP02671 866 aa12.26□□□□□ -0.45
CSDE1-217ENST00000534699 CHGBP05060 677 aa12.26□□□□□ -0.45
CSDE1-217ENST00000534699 SLC1A4P43007 532 aa12.26□□□□□ -0.45
CSDE1-217ENST00000534699 MRPL12P52815 198 aaKnown RBP12.26□□□□□ -0.45
CSDE1-217ENST00000534699 TRAF1Q13077 416 aa12.26□□□□□ -0.45
CSDE1-217ENST00000534699 NMIQ13287 307 aaPredicted RBP12.26□□□□□ -0.45
CSDE1-217ENST00000534699 SNRNP48Q6IEG0 339 aaKnown RBP12.26□□□□□ -0.45
CSDE1-217ENST00000534699 MFSD6Q6ZSS7 791 aa12.26□□□□□ -0.45
CSDE1-217ENST00000534699 RGS22Q8NE09 1264 aa12.26□□□□□ -0.45
CSDE1-217ENST00000534699 MPHOSPH6Q99547 160 aaKnown RBP12.26□□□□□ -0.45
CSDE1-217ENST00000534699 LNPKQ9C0E8 428 aa12.26□□□□□ -0.45
CSDE1-217ENST00000534699 ACAD9Q9H845 621 aa12.26□□□□□ -0.45
CSDE1-217ENST00000534699 DIAPH3Q9NSV4 1193 aa12.26□□□□□ -0.45
CSDE1-217ENST00000534699 CNPY2Q9Y2B0 182 aa12.26□□□□□ -0.45
CSDE1-217ENST00000534699 GPATCH4Q5T3I0 446 aaKnown RBP12.26□□□□□ -0.45
CSDE1-217ENST00000534699 MTA3Q9BTC8 594 aa12.26□□□□□ -0.45
CSDE1-217ENST00000534699 KRT23Q9C075 422 aa12.26□□□□□ -0.45
CSDE1-217ENST00000534699 FAM184BQ9ULE4 1060 aa12.26□□□□□ -0.45
CSDE1-217ENST00000534699 MYCP01106 439 aaPredicted RBP12.25□□□□□ -0.45
CSDE1-217ENST00000534699 RARBP10826 455 aa12.25□□□□□ -0.45
CSDE1-217ENST00000534699 RNF180Q86T96 592 aa12.25□□□□□ -0.45
CSDE1-217ENST00000534699 MORC4Q8TE76 937 aa12.25□□□□□ -0.45
CSDE1-217ENST00000534699 DDX11Q96FC9 970 aa12.25□□□□□ -0.45
CSDE1-217ENST00000534699 GDF15Q99988 308 aa12.25□□□□□ -0.45
CSDE1-217ENST00000534699 UPF3AQ9H1J1 476 aaKnown RBP12.25□□□□□ -0.45
CSDE1-217ENST00000534699 ABHD16BQ9H3Z7 469 aa12.25□□□□□ -0.45
CSDE1-217ENST00000534699 LRRC37A2A6NM11 1700 aa12.25□□□□□ -0.45
CSDE1-217ENST00000534699 MOXD2PA6NHM9 499 aa12.25□□□□□ -0.45
CSDE1-217ENST00000534699 ECM2O94769 699 aaPredicted RBP12.25□□□□□ -0.45
CSDE1-217ENST00000534699 EXOC6Q8TAG9 804 aa12.25□□□□□ -0.45
CSDE1-217ENST00000534699 RANBP17Q9H2T7 1088 aaKnown RBP12.25□□□□□ -0.45
CSDE1-217ENST00000534699 FBXO28Q9NVF7 368 aa12.25□□□□□ -0.45
CSDE1-217ENST00000534699 A0A0D9SFI3 127 aa12.24□□□□□ -0.45
CSDE1-217ENST00000534699 ZNF213O14771 459 aa12.24□□□□□ -0.45
CSDE1-217ENST00000534699 SNHG28P0DPA3 235 aa12.24□□□□□ -0.45
CSDE1-217ENST00000534699 CLEC10AQ8IUN9 316 aa12.24□□□□□ -0.45
CSDE1-217ENST00000534699 TRPV1Q8NER1 839 aa12.24□□□□□ -0.45
CSDE1-217ENST00000534699 BCL11AQ9H165 835 aa12.24□□□□□ -0.45
CSDE1-217ENST00000534699 COLQQ9Y215 455 aaPredicted RBP12.24□□□□□ -0.45
CSDE1-217ENST00000534699 DUSP11O75319 330 aaKnown RBP12.24□□□□□ -0.45
CSDE1-217ENST00000534699 IGHDP01880 384 aa12.24□□□□□ -0.45
CSDE1-217ENST00000534699 ICAM1P05362 532 aa12.24□□□□□ -0.45
CSDE1-217ENST00000534699 IMMTQ16891 758 aaKnown RBP12.24□□□□□ -0.45
CSDE1-217ENST00000534699 IQCA1Q86XH1 822 aa12.24□□□□□ -0.45
CSDE1-217ENST00000534699 IL17RBQ9NRM6 502 aa12.24□□□□□ -0.45
CSDE1-217ENST00000534699 TMEM232C9JQI7 657 aa12.24□□□□□ -0.45
CSDE1-217ENST00000534699 RANBP6O60518 1105 aaKnown RBP12.24□□□□□ -0.45
CSDE1-217ENST00000534699 ZNF865P0CJ78 1059 aaPredicted RBP12.24□□□□□ -0.45
CSDE1-217ENST00000534699 PCSK9Q8NBP7 692 aaKnown RBP12.24□□□□□ -0.45
CSDE1-217ENST00000534699 RILPL2Q969X0 211 aa12.24□□□□□ -0.45
CSDE1-217ENST00000534699 SPC25Q9HBM1 224 aa12.24□□□□□ -0.45
CSDE1-217ENST00000534699 LTBP2Q14767 1821 aa12.23□□□□□ -0.45
CSDE1-217ENST00000534699 MROH7Q68CQ1 1323 aa12.23□□□□□ -0.45
CSDE1-217ENST00000534699 SMIM22K7EJ46 135 aa12.23□□□□□ -0.45
CSDE1-217ENST00000534699 CABYRO75952 493 aa12.23□□□□□ -0.45
CSDE1-217ENST00000534699 CYP2C19P33261 490 aa12.23□□□□□ -0.45
CSDE1-217ENST00000534699 TTC22Q5TAA0 569 aa12.23□□□□□ -0.45
CSDE1-217ENST00000534699 CCDC129Q6ZRS4 1044 aa12.23□□□□□ -0.45
CSDE1-217ENST00000534699 FAM133AQ8N9E0 248 aa12.23□□□□□ -0.45
CSDE1-217ENST00000534699 FAM227BQ96M60 508 aa12.23□□□□□ -0.45
CSDE1-217ENST00000534699 TOX2Q96NM4 488 aa12.23□□□□□ -0.45
CSDE1-217ENST00000534699 MAP3K20Q9NYL2 800 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms