RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 TDRD3Q9H7E2 651 aaKnown RBP15.27■□□□□ 0.03
BEST1-208ENST00000534553 ZKSCAN5Q9Y2L8 839 aa15.27■□□□□ 0.03
BEST1-208ENST00000534553 TXLNAP40222 546 aa15.26■□□□□ 0.03
BEST1-208ENST00000534553 PRPHP41219 470 aa15.26■□□□□ 0.03
BEST1-208ENST00000534553 POSTNQ15063 836 aa15.26■□□□□ 0.03
BEST1-208ENST00000534553 ZNF174Q15697 407 aa15.26■□□□□ 0.03
BEST1-208ENST00000534553 LONRF3Q496Y0 759 aa15.26■□□□□ 0.03
BEST1-208ENST00000534553 TYW1BQ6NUM6 668 aa15.26■□□□□ 0.03
BEST1-208ENST00000534553 DACH1Q9UI36 760 aa15.26■□□□□ 0.03
BEST1-208ENST00000534553 PNMA6FA0A0J9YX94 578 aa15.25■□□□□ 0.03
BEST1-208ENST00000534553 SMCO2A6NFE2 343 aa15.25■□□□□ 0.03
BEST1-208ENST00000534553 PSMD14O00487 310 aa15.25■□□□□ 0.03
BEST1-208ENST00000534553 IKBKBO14920 756 aa15.25■□□□□ 0.03
BEST1-208ENST00000534553 POLR2DO15514 142 aaKnown RBP15.25■□□□□ 0.03
BEST1-208ENST00000534553 MYO1BO43795 1136 aa15.25■□□□□ 0.03
BEST1-208ENST00000534553 VEGFAP15692 232 aaPredicted RBP15.25■□□□□ 0.03
BEST1-208ENST00000534553 CDC25BP30305 580 aa15.25■□□□□ 0.03
BEST1-208ENST00000534553 CACNB3P54284 484 aa15.25■□□□□ 0.03
BEST1-208ENST00000534553 NONOQ15233 471 aaKnown RBP eCLIP15.25■□□□□ 0.03
BEST1-208ENST00000534553 CT47A1Q5JQC4 288 aaPredicted RBP15.25■□□□□ 0.03
BEST1-208ENST00000534553 NT5DC1Q5TFE4 455 aa15.25■□□□□ 0.03
BEST1-208ENST00000534553 SH3BP5LQ7L8J4 393 aa15.25■□□□□ 0.03
BEST1-208ENST00000534553 HOMER1Q86YM7 354 aa15.25■□□□□ 0.03
BEST1-208ENST00000534553 ZFPM1Q8IX07 1006 aa15.25■□□□□ 0.03
BEST1-208ENST00000534553 REXO1Q8N1G1 1221 aaKnown RBP15.25■□□□□ 0.03
BEST1-208ENST00000534553 FAM151AQ8WW52 585 aa15.25■□□□□ 0.03
BEST1-208ENST00000534553 PRMT6Q96LA8 375 aaPredicted RBP15.25■□□□□ 0.03
BEST1-208ENST00000534553 PIGSQ96S52 555 aa15.25■□□□□ 0.03
BEST1-208ENST00000534553 ZNF277Q9NRM2 450 aaPredicted RBP15.25■□□□□ 0.03
BEST1-208ENST00000534553 SIPA1L1O43166 1804 aa15.25■□□□□ 0.03
BEST1-208ENST00000534553 SMC2O95347 1197 aa15.24■□□□□ 0.03
BEST1-208ENST00000534553 SLFN14P0C7P3 912 aa15.24■□□□□ 0.03
BEST1-208ENST00000534553 ABCB5Q2M3G0 1257 aa15.24■□□□□ 0.03
BEST1-208ENST00000534553 PLA2G4DQ86XP0 818 aa15.24■□□□□ 0.03
BEST1-208ENST00000534553 GMCL1P1Q8NEA9 526 aa15.24■□□□□ 0.03
BEST1-208ENST00000534553 CSRNP1Q96S65 589 aa15.24■□□□□ 0.03
BEST1-208ENST00000534553 TAOK3Q9H2K8 898 aa15.24■□□□□ 0.03
BEST1-208ENST00000534553 MCM7P33993 719 aa15.24■□□□□ 0.03
BEST1-208ENST00000534553 EIF6P56537 245 aaKnown RBP15.24■□□□□ 0.03
BEST1-208ENST00000534553 MDM2Q00987 491 aaPredicted RBP15.24■□□□□ 0.03
BEST1-208ENST00000534553 ICA1Q05084 483 aa15.24■□□□□ 0.03
BEST1-208ENST00000534553 GRIN1Q05586 938 aa15.24■□□□□ 0.03
BEST1-208ENST00000534553 SPDYE2Q495Y8 402 aa15.24■□□□□ 0.03
BEST1-208ENST00000534553 FAM83AQ86UY5 434 aa15.24■□□□□ 0.03
BEST1-208ENST00000534553 TEX2Q8IWB9 1127 aa15.24■□□□□ 0.03
BEST1-208ENST00000534553 DHX40Q8IX18 779 aaKnown RBP15.24■□□□□ 0.03
BEST1-208ENST00000534553 JDP2Q8WYK2 163 aa15.24■□□□□ 0.03
BEST1-208ENST00000534553 MRFAP1L1Q96HT8 127 aa15.24■□□□□ 0.03
BEST1-208ENST00000534553 TRIM5Q9C035 493 aa15.24■□□□□ 0.03
BEST1-208ENST00000534553 PCDHAC2Q9Y5I4 1007 aa15.24■□□□□ 0.03
BEST1-208ENST00000534553 FRMPD2Q68DX3 1309 aaPredicted RBP15.23■□□□□ 0.03
BEST1-208ENST00000534553 VWA3AA6NCI4 1184 aa15.23■□□□□ 0.03
BEST1-208ENST00000534553 ZBTB5O15062 677 aa15.23■□□□□ 0.03
BEST1-208ENST00000534553 ACTN4O43707 911 aaKnown RBP15.23■□□□□ 0.03
BEST1-208ENST00000534553 RAD17O75943 681 aa15.23■□□□□ 0.03
BEST1-208ENST00000534553 ADCY7P51828 1080 aa15.23■□□□□ 0.03
BEST1-208ENST00000534553 CCDC96Q2M329 555 aa15.23■□□□□ 0.03
BEST1-208ENST00000534553 DPCR1Q3MIW9 517 aa15.23■□□□□ 0.03
BEST1-208ENST00000534553 RBM26Q5T8P6 1007 aaKnown RBP15.23■□□□□ 0.03
BEST1-208ENST00000534553 MCTP2Q6DN12 878 aa15.23■□□□□ 0.03
BEST1-208ENST00000534553 IQUBQ8NA54 791 aa15.23■□□□□ 0.03
BEST1-208ENST00000534553 SYMPKQ92797 1274 aaKnown RBP15.23■□□□□ 0.03
BEST1-208ENST00000534553 SMARCE1Q969G3 411 aa15.23■□□□□ 0.03
BEST1-208ENST00000534553 MTMR8Q96EF0 704 aa15.23■□□□□ 0.03
BEST1-208ENST00000534553 AK8Q96MA6 479 aa15.23■□□□□ 0.03
BEST1-208ENST00000534553 UBA5Q9GZZ9 404 aa15.23■□□□□ 0.03
BEST1-208ENST00000534553 CD2APQ9Y5K6 639 aa15.23■□□□□ 0.03
BEST1-208ENST00000534553 EEF2P13639 858 aaKnown RBP15.22■□□□□ 0.03
BEST1-208ENST00000534553 SLC1A4P43007 532 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 ZNF75DP51815 510 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 ATP2B2Q01814 1243 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 TNIP1Q15025 636 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 SPECC1Q5M775 1068 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 DTHD1Q6ZMT9 781 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 NEK8Q86SG6 692 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 ADGRF4Q8IZF3 695 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 MLKLQ8NB16 471 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 SPATA20Q8TB22 786 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 GMCL1Q96IK5 515 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 JMJD4Q9H9V9 463 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 VAT1LQ9HCJ6 419 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 ZNF70Q9UC06 446 aaPredicted RBP15.22■□□□□ 0.03
BEST1-208ENST00000534553 SERTAD1Q9UHV2 236 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 BAZ2BQ9UIF8 2168 aaKnown RBP15.22■□□□□ 0.03
BEST1-208ENST00000534553 LTBP3Q9NS15 1303 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 TBC1D12O60347 775 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 RPS12P25398 132 aaKnown RBP15.22■□□□□ 0.03
BEST1-208ENST00000534553 SARSP49591 514 aaKnown RBP15.22■□□□□ 0.03
BEST1-208ENST00000534553 TRAF1Q13077 416 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 SEMA3FQ13275 785 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 PNOCQ13519 176 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 NOM1Q5C9Z4 860 aaKnown RBP15.22■□□□□ 0.03
BEST1-208ENST00000534553 AOPEPQ8N6M6 819 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 C4orf32Q8N8J7 132 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 NAP1L4Q99733 375 aaKnown RBP15.22■□□□□ 0.03
BEST1-208ENST00000534553 GPCPD1Q9NPB8 672 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 RIC8AQ9NPQ8 531 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 RRAGDQ9NQL2 400 aaPredicted RBP15.22■□□□□ 0.03
BEST1-208ENST00000534553 PCDHA5Q9Y5H7 936 aa15.22■□□□□ 0.03
BEST1-208ENST00000534553 MYH4Q9Y623 1939 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms