RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 PLA2G6O60733 806 aa15.88■□□□□ 0.13
CAPN1-228ENST00000534373 IGHDP01880 384 aa15.88■□□□□ 0.13
CAPN1-228ENST00000534373 FGAP02671 866 aa15.88■□□□□ 0.13
CAPN1-228ENST00000534373 BMP8BP34820 402 aa15.88■□□□□ 0.13
CAPN1-228ENST00000534373 MFAP1P55081 439 aaKnown RBP15.88■□□□□ 0.13
CAPN1-228ENST00000534373 ZNF792Q3KQV3 632 aa15.88■□□□□ 0.13
CAPN1-228ENST00000534373 VPS53Q5VIR6 699 aa15.88■□□□□ 0.13
CAPN1-228ENST00000534373 SNRNP48Q6IEG0 339 aaKnown RBP15.88■□□□□ 0.13
CAPN1-228ENST00000534373 B4GALNT3Q6L9W6 998 aa15.88■□□□□ 0.13
CAPN1-228ENST00000534373 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.88■□□□□ 0.13
CAPN1-228ENST00000534373 EXOC6Q8TAG9 804 aa15.88■□□□□ 0.13
CAPN1-228ENST00000534373 CHURC1Q8WUH1 139 aa15.88■□□□□ 0.13
CAPN1-228ENST00000534373 GMCL1Q96IK5 515 aa15.88■□□□□ 0.13
CAPN1-228ENST00000534373 TINF2Q9BSI4 451 aa15.88■□□□□ 0.13
CAPN1-228ENST00000534373 ZMYM6O95789 1325 aa15.88■□□□□ 0.13
CAPN1-228ENST00000534373 HSPD1P10809 573 aaKnown RBP15.87■□□□□ 0.13
CAPN1-228ENST00000534373 PCP11498 1178 aaKnown RBP15.87■□□□□ 0.13
CAPN1-228ENST00000534373 NOVP48745 357 aa15.87■□□□□ 0.13
CAPN1-228ENST00000534373 CTDSPL2Q05D32 466 aa15.87■□□□□ 0.13
CAPN1-228ENST00000534373 FAM160B2Q86V87 743 aa15.87■□□□□ 0.13
CAPN1-228ENST00000534373 PLEKHM2Q8IWE5 1019 aa15.87■□□□□ 0.13
CAPN1-228ENST00000534373 C7orf61Q8IZ16 206 aa15.87■□□□□ 0.13
CAPN1-228ENST00000534373 LRRC47Q8N1G4 583 aaKnown RBP15.87■□□□□ 0.13
CAPN1-228ENST00000534373 KIFC2Q96AC6 838 aa15.87■□□□□ 0.13
CAPN1-228ENST00000534373 FAM227BQ96M60 508 aa15.87■□□□□ 0.13
CAPN1-228ENST00000534373 FBXO40Q9UH90 709 aa15.87■□□□□ 0.13
CAPN1-228ENST00000534373 COL11A1P12107 1806 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-228ENST00000534373 RANBP2P49792 3224 aaKnown RBP15.87■□□□□ 0.13
CAPN1-228ENST00000534373 ZNFX1Q9P2E3 1918 aaKnown RBP15.86■□□□□ 0.13
CAPN1-228ENST00000534373 MYH4Q9Y623 1939 aa15.86■□□□□ 0.13
CAPN1-228ENST00000534373 A0A0D9SFI3 127 aa15.86■□□□□ 0.13
CAPN1-228ENST00000534373 SLC1A4P43007 532 aa15.86■□□□□ 0.13
CAPN1-228ENST00000534373 NT5C2P49902 561 aa15.86■□□□□ 0.13
CAPN1-228ENST00000534373 STAT2P52630 851 aa15.86■□□□□ 0.13
CAPN1-228ENST00000534373 CHST13Q8NET6 341 aa15.86■□□□□ 0.13
CAPN1-228ENST00000534373 STAG1Q8WVM7 1258 aa15.86■□□□□ 0.13
CAPN1-228ENST00000534373 RILPL2Q969X0 211 aa15.86■□□□□ 0.13
CAPN1-228ENST00000534373 DDX11Q96FC9 970 aa15.86■□□□□ 0.13
CAPN1-228ENST00000534373 GDF15Q99988 308 aa15.86■□□□□ 0.13
CAPN1-228ENST00000534373 SENP6Q9GZR1 1112 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-228ENST00000534373 IL17RBQ9NRM6 502 aa15.86■□□□□ 0.13
CAPN1-228ENST00000534373 TCP11L1Q9NUJ3 509 aa15.86■□□□□ 0.13
CAPN1-228ENST00000534373 STX8Q9UNK0 236 aa15.86■□□□□ 0.13
CAPN1-228ENST00000534373 DNAJC25-GNG10A0A024R161 153 aa15.85■□□□□ 0.13
CAPN1-228ENST00000534373 TMEM232C9JQI7 657 aa15.85■□□□□ 0.13
CAPN1-228ENST00000534373 RANBP6O60518 1105 aaKnown RBP15.85■□□□□ 0.13
CAPN1-228ENST00000534373 PGK2P07205 417 aa15.85■□□□□ 0.13
CAPN1-228ENST00000534373 SDSP20132 328 aa15.85■□□□□ 0.13
CAPN1-228ENST00000534373 NMIQ13287 307 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-228ENST00000534373 RCSD1Q6JBY9 416 aa15.85■□□□□ 0.13
CAPN1-228ENST00000534373 MAMDC4Q6UXC1 1216 aa15.85■□□□□ 0.13
CAPN1-228ENST00000534373 ZNF467Q7Z7K2 595 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-228ENST00000534373 CPXCR1Q8N123 301 aa15.85■□□□□ 0.13
CAPN1-228ENST00000534373 RIPK3Q9Y572 518 aa15.85■□□□□ 0.13
CAPN1-228ENST00000534373 CCDC171Q6TFL3 1326 aa15.85■□□□□ 0.13
CAPN1-228ENST00000534373 ALPK3Q96L96 1907 aa15.84■□□□□ 0.13
CAPN1-228ENST00000534373 TRIOBPQ9H2D6 2365 aa15.84■□□□□ 0.13
CAPN1-228ENST00000534373 KBTBD13C9JR72 458 aa15.84■□□□□ 0.13
CAPN1-228ENST00000534373 HIP1O00291 1037 aa15.84■□□□□ 0.13
CAPN1-228ENST00000534373 MCCP23508 829 aa15.84■□□□□ 0.13
CAPN1-228ENST00000534373 LRRC26Q2I0M4 334 aa15.84■□□□□ 0.13
CAPN1-228ENST00000534373 PRAMEF19Q5SWL8 479 aa15.84■□□□□ 0.13
CAPN1-228ENST00000534373 RAVER2Q9HCJ3 691 aaKnown RBP15.84■□□□□ 0.13
CAPN1-228ENST00000534373 INCENPQ9NQS7 918 aa15.84■□□□□ 0.13
CAPN1-228ENST00000534373 CNPY2Q9Y2B0 182 aa15.84■□□□□ 0.13
CAPN1-228ENST00000534373 SYNGAP1Q96PV0 1343 aa15.84■□□□□ 0.13
CAPN1-228ENST00000534373 RARBP10826 455 aa15.83■□□□□ 0.12
CAPN1-228ENST00000534373 TKFCQ3LXA3 575 aa15.83■□□□□ 0.12
CAPN1-228ENST00000534373 ZNF589Q86UQ0 364 aaPredicted RBP15.83■□□□□ 0.12
CAPN1-228ENST00000534373 ANKRD35Q8N283 1001 aa15.83■□□□□ 0.12
CAPN1-228ENST00000534373 TTC14Q96N46 770 aa15.83■□□□□ 0.12
CAPN1-228ENST00000534373 RNF41Q9H4P4 317 aaPredicted RBP15.83■□□□□ 0.12
CAPN1-228ENST00000534373 ZMYND8Q9ULU4 1186 aaPredicted RBP15.83■□□□□ 0.12
CAPN1-228ENST00000534373 SUPT16HQ9Y5B9 1047 aaKnown RBP15.83■□□□□ 0.12
CAPN1-228ENST00000534373 TACC3Q9Y6A5 838 aa15.83■□□□□ 0.12
CAPN1-228ENST00000534373 FRMPD3Q5JV73 1810 aa15.82■□□□□ 0.12
CAPN1-228ENST00000534373 ZNF865P0CJ78 1059 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-228ENST00000534373 AKR1A1P14550 325 aa15.82■□□□□ 0.12
CAPN1-228ENST00000534373 GJC2Q5T442 439 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-228ENST00000534373 MFSD6Q6ZSS7 791 aa15.82■□□□□ 0.12
CAPN1-228ENST00000534373 DCAF4Q8WV16 495 aa15.82■□□□□ 0.12
CAPN1-228ENST00000534373 TOMM22Q9NS69 142 aa15.82■□□□□ 0.12
CAPN1-228ENST00000534373 NMT2O60551 498 aa15.81■□□□□ 0.12
CAPN1-228ENST00000534373 TOP1P11387 765 aaKnown RBP15.81■□□□□ 0.12
CAPN1-228ENST00000534373 SLC4A3P48751 1232 aa15.81■□□□□ 0.12
CAPN1-228ENST00000534373 IKQ13123 557 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-228ENST00000534373 LRRC41Q15345 812 aa15.81■□□□□ 0.12
CAPN1-228ENST00000534373 AKNAD1Q5T1N1 836 aa15.81■□□□□ 0.12
CAPN1-228ENST00000534373 C1orf53Q5VUE5 145 aa15.81■□□□□ 0.12
CAPN1-228ENST00000534373 RNF180Q86T96 592 aa15.81■□□□□ 0.12
CAPN1-228ENST00000534373 ACAD9Q9H845 621 aa15.81■□□□□ 0.12
CAPN1-228ENST00000534373 XPNPEP3Q9NQH7 507 aa15.81■□□□□ 0.12
CAPN1-228ENST00000534373 FAM184BQ9ULE4 1060 aa15.81■□□□□ 0.12
CAPN1-228ENST00000534373 ISY1Q9ULR0 285 aaKnown RBP15.81■□□□□ 0.12
CAPN1-228ENST00000534373 ZNF536O15090 1300 aa15.8■□□□□ 0.12
CAPN1-228ENST00000534373 ZNF213O14771 459 aa15.8■□□□□ 0.12
CAPN1-228ENST00000534373 SNAI1O95863 264 aaPredicted RBP15.8■□□□□ 0.12
CAPN1-228ENST00000534373 SYN1P17600 705 aa15.8■□□□□ 0.12
CAPN1-228ENST00000534373 MAGEA10P43363 369 aaPredicted RBP15.8■□□□□ 0.12
CAPN1-228ENST00000534373 RRP12Q5JTH9 1297 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms