RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, human

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD9-208	ENST00000533643	SYDE2	Q5VT97	1194 aa		13.86	□□□□□ -0.19
COMMD9-208	ENST00000533643	FAM160B2	Q86V87	743 aa		13.86	□□□□□ -0.19
COMMD9-208	ENST00000533643	CMTR1	Q8N1G2	835 aa	Known RBP	13.86	□□□□□ -0.19
COMMD9-208	ENST00000533643	FAM43A	Q8N2R8	423 aa		13.86	□□□□□ -0.19
COMMD9-208	ENST00000533643	LZTS2	Q9BRK4	669 aa		13.86	□□□□□ -0.19
COMMD9-208	ENST00000533643	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.86	□□□□□ -0.19
COMMD9-208	ENST00000533643	SLC45A1	Q9Y2W3	748 aa		13.86	□□□□□ -0.19
COMMD9-208	ENST00000533643	RBM19	Q9Y4C8	960 aa	Known RBP	13.86	□□□□□ -0.19
COMMD9-208	ENST00000533643	PDHX	O00330	501 aa		13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	CYTH3	O43739	400 aa		13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	FLOT1	O75955	427 aa		13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	SMARCA1	P28370	1054 aa		13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	STAT2	P52630	851 aa		13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	SREBF2	Q12772	1141 aa		13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	IK	Q13123	557 aa	Predicted RBP	13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	COG2	Q14746	738 aa		13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	CCDC83	Q8IWF9	413 aa		13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	HSCB	Q8IWL3	235 aa		13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	ADGRF4	Q8IZF3	695 aa		13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	CCDC82	Q8N4S0	544 aa		13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	PRPF38A	Q8NAV1	312 aa	Known RBP	13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	P2RX7	Q99572	595 aa	Known RBP	13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	SLF1	Q9BQI6	1058 aa		13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	SPZ1	Q9BXG8	430 aa		13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	RIOX1	Q9H6W3	641 aa		13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	PPP1R9A	Q9ULJ8	1098 aa		13.85	□□□□□ -0.19
COMMD9-208	ENST00000533643	CPLX1	O14810	134 aa		13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	DHX16	O60231	1041 aa	Known RBP	13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	DTNB	O60941	627 aa		13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	PPFIA3	O75145	1194 aa		13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	CTDNEP1	O95476	244 aa		13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	IFNAR1	P17181	557 aa		13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	OSBP	P22059	807 aa		13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	DSG3	P32926	999 aa		13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	MAP2K2	P36507	400 aa		13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	IRX3	P78415	501 aa	Predicted RBP	13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	CUL4A	Q13619	759 aa		13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	IFNL1	Q8IU54	200 aa		13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	KIFC2	Q96AC6	838 aa		13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	ATG4C	Q96DT6	458 aa		13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	JMJD4	Q9H9V9	463 aa		13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	VAT1L	Q9HCJ6	419 aa		13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	HOXC10	Q9NYD6	342 aa		13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	PRR12	Q9ULL5	1215 aa		13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	ADAMTS5	Q9UNA0	930 aa		13.84	□□□□□ -0.19
COMMD9-208	ENST00000533643	SNAP25	P60880	206 aa		13.83	□□□□□ -0.2
COMMD9-208	ENST00000533643	POTEE	Q6S8J3	1075 aa		13.83	□□□□□ -0.2
COMMD9-208	ENST00000533643	REM2	Q8IYK8	340 aa	Predicted RBP	13.83	□□□□□ -0.2
COMMD9-208	ENST00000533643	NSUN7	Q8NE18	718 aa	Known RBP	13.83	□□□□□ -0.2
COMMD9-208	ENST00000533643	PHKB	Q93100	1093 aa		13.83	□□□□□ -0.2
COMMD9-208	ENST00000533643	MTMR8	Q96EF0	704 aa		13.83	□□□□□ -0.2
COMMD9-208	ENST00000533643	ZCCHC17	Q9NP64	241 aa	Known RBP	13.83	□□□□□ -0.2
COMMD9-208	ENST00000533643		V9GY48	417 aa	Predicted RBP	13.83	□□□□□ -0.2
COMMD9-208	ENST00000533643	MYPN	Q86TC9	1320 aa		13.83	□□□□□ -0.2
COMMD9-208	ENST00000533643	CNTNAP5	Q8WYK1	1306 aa		13.83	□□□□□ -0.2
COMMD9-208	ENST00000533643	hCG_1642624	A0A1W2PR95	340 aa		13.82	□□□□□ -0.2
COMMD9-208	ENST00000533643	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.82	□□□□□ -0.2
COMMD9-208	ENST00000533643	VWA5A	O00534	786 aa		13.82	□□□□□ -0.2
COMMD9-208	ENST00000533643	CYP2C8	P10632	490 aa		13.82	□□□□□ -0.2
COMMD9-208	ENST00000533643	HERVK_113	P62684	666 aa		13.82	□□□□□ -0.2
COMMD9-208	ENST00000533643	OTUD7B	Q6GQQ9	843 aa		13.82	□□□□□ -0.2
COMMD9-208	ENST00000533643	CPLX2	Q6PUV4	134 aa	Known RBP	13.82	□□□□□ -0.2
COMMD9-208	ENST00000533643	PIBF1	Q8WXW3	757 aa		13.82	□□□□□ -0.2
COMMD9-208	ENST00000533643	PIGS	Q96S52	555 aa		13.82	□□□□□ -0.2
COMMD9-208	ENST00000533643	LLPH	Q9BRT6	129 aa	Known RBP	13.82	□□□□□ -0.2
COMMD9-208	ENST00000533643	SLC38A10	Q9HBR0	1119 aa		13.82	□□□□□ -0.2
COMMD9-208	ENST00000533643	PNMA3	Q9UL41	463 aa		13.82	□□□□□ -0.2
COMMD9-208	ENST00000533643	PRPF3	O43395	683 aa	Known RBP	13.81	□□□□□ -0.2
COMMD9-208	ENST00000533643	JAK2	O60674	1132 aa		13.81	□□□□□ -0.2
COMMD9-208	ENST00000533643	ZBED4	O75132	1171 aa		13.81	□□□□□ -0.2
COMMD9-208	ENST00000533643	CDKL5	O76039	1030 aa		13.81	□□□□□ -0.2
COMMD9-208	ENST00000533643	FMNL1	O95466	1100 aa	Predicted RBP	13.81	□□□□□ -0.2
COMMD9-208	ENST00000533643	ANP32A	P39687	249 aa	Known RBP	13.81	□□□□□ -0.2
COMMD9-208	ENST00000533643	SSRP1	Q08945	709 aa	Known RBP	13.81	□□□□□ -0.2
COMMD9-208	ENST00000533643	BECN1	Q14457	450 aa		13.81	□□□□□ -0.2
COMMD9-208	ENST00000533643	LBX2	Q6XYB7	198 aa		13.81	□□□□□ -0.2
COMMD9-208	ENST00000533643	REPS2	Q8NFH8	660 aa		13.81	□□□□□ -0.2
COMMD9-208	ENST00000533643	SMARCC2	Q8TAQ2	1214 aa		13.81	□□□□□ -0.2
COMMD9-208	ENST00000533643	RRP36	Q96EU6	259 aa	Known RBP	13.81	□□□□□ -0.2
COMMD9-208	ENST00000533643	PARK7	Q99497	189 aa	Known RBP	13.81	□□□□□ -0.2
COMMD9-208	ENST00000533643	SLC26A6	Q9BXS9	759 aa		13.81	□□□□□ -0.2
COMMD9-208	ENST00000533643	RANBP17	Q9H2T7	1088 aa	Known RBP	13.81	□□□□□ -0.2
COMMD9-208	ENST00000533643	RLF	Q13129	1914 aa		13.81	□□□□□ -0.2
COMMD9-208	ENST00000533643	PNMA6F	A0A0J9YX94	578 aa		13.8	□□□□□ -0.2
COMMD9-208	ENST00000533643	PTPDC1	A2A3K4	754 aa		13.8	□□□□□ -0.2
COMMD9-208	ENST00000533643	ZBTB5	O15062	677 aa		13.8	□□□□□ -0.2
COMMD9-208	ENST00000533643	PEX10	O60683	326 aa		13.8	□□□□□ -0.2
COMMD9-208	ENST00000533643	CNMD	O75829	334 aa		13.8	□□□□□ -0.2
COMMD9-208	ENST00000533643	FDX1	P10109	184 aa		13.8	□□□□□ -0.2
COMMD9-208	ENST00000533643	FDPS	P14324	419 aa	Known RBP	13.8	□□□□□ -0.2
COMMD9-208	ENST00000533643	CDC37	Q16543	378 aa	Predicted RBP	13.8	□□□□□ -0.2
COMMD9-208	ENST00000533643	QRICH1	Q2TAL8	776 aa		13.8	□□□□□ -0.2
COMMD9-208	ENST00000533643	HOMER1	Q86YM7	354 aa		13.8	□□□□□ -0.2
COMMD9-208	ENST00000533643	DNAJC5G	Q8N7S2	189 aa		13.8	□□□□□ -0.2
COMMD9-208	ENST00000533643	MB21D1	Q8N884	522 aa		13.8	□□□□□ -0.2
COMMD9-208	ENST00000533643	RNF26	Q9BY78	433 aa	Predicted RBP	13.8	□□□□□ -0.2
COMMD9-208	ENST00000533643	BTBD7	Q9P203	1132 aa		13.8	□□□□□ -0.2
COMMD9-208	ENST00000533643	ORC3	Q9UBD5	711 aa	Predicted RBP	13.8	□□□□□ -0.2

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