RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 RARBP10826 455 aa10.4□□□□□ -0.74
COPB1-210ENST00000533533 CDK8P49336 464 aa10.4□□□□□ -0.74
COPB1-210ENST00000533533 SMAD3P84022 425 aaKnown RBP10.4□□□□□ -0.74
COPB1-210ENST00000533533 TLE2Q04725 743 aa10.4□□□□□ -0.74
COPB1-210ENST00000533533 C12orf60Q5U649 245 aa10.4□□□□□ -0.74
COPB1-210ENST00000533533 RIOX2Q8IUF8 465 aa10.4□□□□□ -0.74
COPB1-210ENST00000533533 RILPL2Q969X0 211 aa10.4□□□□□ -0.74
COPB1-210ENST00000533533 MMP19Q99542 508 aa10.4□□□□□ -0.74
COPB1-210ENST00000533533 XPNPEP3Q9NQH7 507 aa10.4□□□□□ -0.74
COPB1-210ENST00000533533 PHF24Q9UPV7 400 aa10.4□□□□□ -0.74
COPB1-210ENST00000533533 TACC3Q9Y6A5 838 aa10.4□□□□□ -0.74
COPB1-210ENST00000533533 MUC3AQ02505 3323 aa10.4□□□□□ -0.74
COPB1-210ENST00000533533 CYP2D7A0A087X1C5 515 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 USP17L12C9JPN9 530 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 USP17L21D6R901 530 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 SMIM22K7EJ46 135 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 VWA5AO00534 786 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 RNF113AO15541 343 aaKnown RBP10.39□□□□□ -0.75
COPB1-210ENST00000533533 PGK2P07205 417 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 EEF2P13639 858 aaKnown RBP10.39□□□□□ -0.75
COPB1-210ENST00000533533 STAT3P40763 770 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 KCTD2Q14681 263 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 UBE3CQ15386 1083 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 ZNF792Q3KQV3 632 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 C16orf86Q6ZW13 317 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 RNF180Q86T96 592 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 AMOTL1Q8IY63 956 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 DDRGK1Q96HY6 314 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 CCDC136Q96JN2 1154 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 TINF2Q9BSI4 451 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 TTYH1Q9H313 450 aaPredicted RBP10.39□□□□□ -0.75
COPB1-210ENST00000533533 KANSL2Q9H9L4 492 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 FBXO28Q9NVF7 368 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 DIS3Q9Y2L1 958 aaKnown RBP10.39□□□□□ -0.75
COPB1-210ENST00000533533 BDP1A6H8Y1 2624 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 ROBO3Q96MS0 1386 aa10.39□□□□□ -0.75
COPB1-210ENST00000533533 SALL3Q9BXA9 1300 aa10.38□□□□□ -0.75
COPB1-210ENST00000533533 PGK1P00558 417 aa10.38□□□□□ -0.75
COPB1-210ENST00000533533 ZFYP08048 801 aaPredicted RBP10.38□□□□□ -0.75
COPB1-210ENST00000533533 CLTBP09497 229 aa10.38□□□□□ -0.75
COPB1-210ENST00000533533 TAL1P17542 331 aaPredicted RBP10.38□□□□□ -0.75
COPB1-210ENST00000533533 ITGB8P26012 769 aa10.38□□□□□ -0.75
COPB1-210ENST00000533533 COPB2P35606 906 aa10.38□□□□□ -0.75
COPB1-210ENST00000533533 PLEKHM2Q8IWE5 1019 aa10.38□□□□□ -0.75
COPB1-210ENST00000533533 MAFAQ8NHW3 353 aaPredicted RBP10.38□□□□□ -0.75
COPB1-210ENST00000533533 APPBP2Q92624 585 aa10.38□□□□□ -0.75
COPB1-210ENST00000533533 EVI5LQ96CN4 794 aa10.38□□□□□ -0.75
COPB1-210ENST00000533533 PUS7LQ9H0K6 701 aaKnown RBP10.38□□□□□ -0.75
COPB1-210ENST00000533533 GOPCQ9HD26 462 aa10.38□□□□□ -0.75
COPB1-210ENST00000533533 ZNF214Q9UL59 606 aaPredicted RBP10.38□□□□□ -0.75
COPB1-210ENST00000533533 PPP1R9AQ9ULJ8 1098 aa10.38□□□□□ -0.75
COPB1-210ENST00000533533 SLC4A4Q9Y6R1 1079 aa10.38□□□□□ -0.75
COPB1-210ENST00000533533 GREB1LQ9C091 1923 aaPredicted RBP10.38□□□□□ -0.75
COPB1-210ENST00000533533 MYH4Q9Y623 1939 aa10.38□□□□□ -0.75
COPB1-210ENST00000533533 A0A1W2PQ45 241 aaPredicted RBP10.37□□□□□ -0.75
COPB1-210ENST00000533533 A0A1W2PQY0 241 aa10.37□□□□□ -0.75
COPB1-210ENST00000533533 KIAA0355O15063 1070 aa10.37□□□□□ -0.75
COPB1-210ENST00000533533 RAD21O60216 631 aa10.37□□□□□ -0.75
COPB1-210ENST00000533533 PQBP1O60828 265 aaKnown RBP10.37□□□□□ -0.75
COPB1-210ENST00000533533 APPP05067 770 aa10.37□□□□□ -0.75
COPB1-210ENST00000533533 ZNF865P0CJ78 1059 aaPredicted RBP10.37□□□□□ -0.75
COPB1-210ENST00000533533 AKR1A1P14550 325 aa10.37□□□□□ -0.75
COPB1-210ENST00000533533 FAM83BQ5T0W9 1011 aa10.37□□□□□ -0.75
COPB1-210ENST00000533533 CTR9Q6PD62 1173 aa10.37□□□□□ -0.75
COPB1-210ENST00000533533 REPS2Q8NFH8 660 aa10.37□□□□□ -0.75
COPB1-210ENST00000533533 MYLIPQ8WY64 445 aa10.37□□□□□ -0.75
COPB1-210ENST00000533533 RNPC3Q96LT9 517 aaKnown RBP10.37□□□□□ -0.75
COPB1-210ENST00000533533 CNPY2Q9Y2B0 182 aa10.37□□□□□ -0.75
COPB1-210ENST00000533533 TMEM265A0A087WTH1 108 aa10.36□□□□□ -0.75
COPB1-210ENST00000533533 ADAMTS4O75173 837 aa10.36□□□□□ -0.75
COPB1-210ENST00000533533 RAG1P15918 1043 aa10.36□□□□□ -0.75
COPB1-210ENST00000533533 PDE4AP27815 886 aa10.36□□□□□ -0.75
COPB1-210ENST00000533533 EPHB4P54760 987 aa10.36□□□□□ -0.75
COPB1-210ENST00000533533 CENPQQ7L2Z9 268 aaPredicted RBP10.36□□□□□ -0.75
COPB1-210ENST00000533533 MSL3Q8N5Y2 521 aaKnown RBP10.36□□□□□ -0.75
COPB1-210ENST00000533533 OSBP2Q969R2 916 aa10.36□□□□□ -0.75
COPB1-210ENST00000533533 LENG1Q96BZ8 264 aaPredicted RBP10.36□□□□□ -0.75
COPB1-210ENST00000533533 TOX2Q96NM4 488 aa10.36□□□□□ -0.75
COPB1-210ENST00000533533 SEC62Q99442 399 aaKnown RBP10.36□□□□□ -0.75
COPB1-210ENST00000533533 TSEN34Q9BSV6 310 aaKnown RBP10.36□□□□□ -0.75
COPB1-210ENST00000533533 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.36□□□□□ -0.75
COPB1-210ENST00000533533 TEX13BQ9BXU2 312 aa10.36□□□□□ -0.75
COPB1-210ENST00000533533 CHD9Q3L8U1 2897 aa10.36□□□□□ -0.75
COPB1-210ENST00000533533 DCDC2CA8MYV0 355 aa10.35□□□□□ -0.75
COPB1-210ENST00000533533 M0R2C6 588 aa10.35□□□□□ -0.75
COPB1-210ENST00000533533 GPAA1O43292 621 aa10.35□□□□□ -0.75
COPB1-210ENST00000533533 FOSL2P15408 326 aa10.35□□□□□ -0.75
COPB1-210ENST00000533533 ACLYP53396 1101 aa10.35□□□□□ -0.75
COPB1-210ENST00000533533 FPGSQ05932 587 aa10.35□□□□□ -0.75
COPB1-210ENST00000533533 FAAP100Q0VG06 881 aa10.35□□□□□ -0.75
COPB1-210ENST00000533533 ANKRD33Q7Z3H0 272 aa10.35□□□□□ -0.75
COPB1-210ENST00000533533 KLHDC9Q8NEP7 349 aa10.35□□□□□ -0.75
COPB1-210ENST00000533533 SP7Q8TDD2 431 aaPredicted RBP10.35□□□□□ -0.75
COPB1-210ENST00000533533 NUP133Q8WUM0 1156 aa10.35□□□□□ -0.75
COPB1-210ENST00000533533 SLF1Q9BQI6 1058 aa10.35□□□□□ -0.75
COPB1-210ENST00000533533 STARD7Q9NQZ5 370 aa10.35□□□□□ -0.75
COPB1-210ENST00000533533 TMEM39AQ9NV64 488 aa10.35□□□□□ -0.75
COPB1-210ENST00000533533 ARPP21Q9UBL0 812 aaPredicted RBP10.35□□□□□ -0.75
COPB1-210ENST00000533533 SYNGAP1Q96PV0 1343 aa10.34□□□□□ -0.75
COPB1-210ENST00000533533 SYNRGQ9UMZ2 1314 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms