RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 DOCK3Q8IZD9 2030 aa24.52■■□□□ 1.52
VPS51-211ENST00000533487 CTGFP29279 349 aa24.52■■□□□ 1.52
VPS51-211ENST00000533487 ANTXR2P58335 489 aa24.52■■□□□ 1.52
VPS51-211ENST00000533487 IKQ13123 557 aaPredicted RBP24.52■■□□□ 1.52
VPS51-211ENST00000533487 KCTD1Q719H9 257 aa24.52■■□□□ 1.52
VPS51-211ENST00000533487 DHX32Q7L7V1 743 aaKnown RBP24.52■■□□□ 1.52
VPS51-211ENST00000533487 RIOX2Q8IUF8 465 aa24.52■■□□□ 1.52
VPS51-211ENST00000533487 RASEFQ8IZ41 740 aa24.52■■□□□ 1.52
VPS51-211ENST00000533487 CWC22Q9HCG8 908 aaKnown RBP24.52■■□□□ 1.52
VPS51-211ENST00000533487 ZNF214Q9UL59 606 aaPredicted RBP24.52■■□□□ 1.52
VPS51-211ENST00000533487 ISY1Q9ULR0 285 aaKnown RBP24.52■■□□□ 1.52
VPS51-211ENST00000533487 IVNS1ABPQ9Y6Y0 642 aa24.52■■□□□ 1.52
VPS51-211ENST00000533487 ZNF236Q9UL36 1845 aa24.51■■□□□ 1.51
VPS51-211ENST00000533487 STAT3P40763 770 aa24.51■■□□□ 1.51
VPS51-211ENST00000533487 TMEM132BQ14DG7 1078 aa24.51■■□□□ 1.51
VPS51-211ENST00000533487 PLEKHH3Q7Z736 793 aa24.51■■□□□ 1.51
VPS51-211ENST00000533487 ABRAQ8N0Z2 381 aa24.51■■□□□ 1.51
VPS51-211ENST00000533487 KIFC2Q96AC6 838 aa24.51■■□□□ 1.51
VPS51-211ENST00000533487 MOV10L1Q9BXT6 1211 aaKnown RBP24.51■■□□□ 1.51
VPS51-211ENST00000533487 PARP1P09874 1014 aaKnown RBP24.5■■□□□ 1.51
VPS51-211ENST00000533487 CAP1Q01518 475 aa24.5■■□□□ 1.51
VPS51-211ENST00000533487 GPR142Q7Z601 462 aa24.5■■□□□ 1.51
VPS51-211ENST00000533487 CATIPQ7Z7H3 387 aa24.5■■□□□ 1.51
VPS51-211ENST00000533487 NUDT12Q9BQG2 462 aa24.5■■□□□ 1.51
VPS51-211ENST00000533487 SNX14Q9Y5W7 946 aa24.5■■□□□ 1.51
VPS51-211ENST00000533487 SLC15A5A6NIM6 579 aa24.49■■□□□ 1.51
VPS51-211ENST00000533487 DDAH1O94760 285 aa24.49■■□□□ 1.51
VPS51-211ENST00000533487 ANAPC15P60006 121 aa24.49■■□□□ 1.51
VPS51-211ENST00000533487 PLS1Q14651 629 aa24.49■■□□□ 1.51
VPS51-211ENST00000533487 TKFCQ3LXA3 575 aa24.49■■□□□ 1.51
VPS51-211ENST00000533487 SYDE2Q5VT97 1194 aa24.49■■□□□ 1.51
VPS51-211ENST00000533487 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.49■■□□□ 1.51
VPS51-211ENST00000533487 NBPF11Q86T75 865 aa24.49■■□□□ 1.51
VPS51-211ENST00000533487 SGMS1Q86VZ5 419 aa24.49■■□□□ 1.51
VPS51-211ENST00000533487 TRMT44Q8IYL2 757 aaKnown RBP24.49■■□□□ 1.51
VPS51-211ENST00000533487 PXYLP1Q8TE99 480 aa24.49■■□□□ 1.51
VPS51-211ENST00000533487 PORCNQ9H237 461 aa24.49■■□□□ 1.51
VPS51-211ENST00000533487 LY9Q9HBG7 655 aa24.49■■□□□ 1.51
VPS51-211ENST00000533487 PRR12Q9ULL5 1215 aa24.49■■□□□ 1.51
VPS51-211ENST00000533487 GTF3C3Q9Y5Q9 886 aa24.49■■□□□ 1.51
VPS51-211ENST00000533487 PLXNB2O15031 1838 aa24.49■■□□□ 1.51
VPS51-211ENST00000533487 SH2B2O14492 632 aaPredicted RBP24.48■■□□□ 1.51
VPS51-211ENST00000533487 CALM1P0DP23 149 aa24.48■■□□□ 1.51
VPS51-211ENST00000533487 CALM2P0DP24 149 aa24.48■■□□□ 1.51
VPS51-211ENST00000533487 CALM3P0DP25 149 aa24.48■■□□□ 1.51
VPS51-211ENST00000533487 XRCC5P13010 732 aaKnown RBP24.48■■□□□ 1.51
VPS51-211ENST00000533487 EXOSC10Q01780 885 aaKnown RBP24.48■■□□□ 1.51
VPS51-211ENST00000533487 SAMD1Q6SPF0 538 aaPredicted RBP24.48■■□□□ 1.51
VPS51-211ENST00000533487 FBXL16Q8N461 479 aa24.48■■□□□ 1.51
VPS51-211ENST00000533487 RAET1EQ8TD07 263 aa24.48■■□□□ 1.51
VPS51-211ENST00000533487 TM6SF1Q9BZW5 370 aa24.48■■□□□ 1.51
VPS51-211ENST00000533487 FBXO40Q9UH90 709 aa24.48■■□□□ 1.51
VPS51-211ENST00000533487 GJD2Q9UKL4 321 aa24.48■■□□□ 1.51
VPS51-211ENST00000533487 MTMR7Q9Y216 660 aa24.48■■□□□ 1.51
VPS51-211ENST00000533487 ERCC3P19447 782 aa24.47■■□□□ 1.51
VPS51-211ENST00000533487 PTPREP23469 700 aa24.47■■□□□ 1.51
VPS51-211ENST00000533487 FLT3LGP49771 235 aa24.47■■□□□ 1.51
VPS51-211ENST00000533487 PRKCZQ05513 592 aa24.47■■□□□ 1.51
VPS51-211ENST00000533487 TROAPQ12815 778 aa24.47■■□□□ 1.51
VPS51-211ENST00000533487 BLOC1S2Q6QNY1 142 aa24.47■■□□□ 1.51
VPS51-211ENST00000533487 CHST3Q7LGC8 479 aa24.47■■□□□ 1.51
VPS51-211ENST00000533487 SLAIN1Q8ND83 568 aa24.47■■□□□ 1.51
VPS51-211ENST00000533487 RANBP17Q9H2T7 1088 aaKnown RBP24.47■■□□□ 1.51
VPS51-211ENST00000533487 SLC5A4Q9NY91 659 aa24.47■■□□□ 1.51
VPS51-211ENST00000533487 CCDC69A6NI79 296 aa24.46■■□□□ 1.51
VPS51-211ENST00000533487 KIF5BP33176 963 aa24.46■■□□□ 1.51
VPS51-211ENST00000533487 RGS2P41220 211 aa24.46■■□□□ 1.51
VPS51-211ENST00000533487 RCAN1P53805 252 aa24.46■■□□□ 1.51
VPS51-211ENST00000533487 GRB14Q14449 540 aa24.46■■□□□ 1.51
VPS51-211ENST00000533487 GRM4Q14833 912 aa24.46■■□□□ 1.51
VPS51-211ENST00000533487 ADCK5Q3MIX3 580 aa24.46■■□□□ 1.51
VPS51-211ENST00000533487 MORN1Q5T089 497 aa24.46■■□□□ 1.51
VPS51-211ENST00000533487 SNRNP48Q6IEG0 339 aaKnown RBP24.46■■□□□ 1.51
VPS51-211ENST00000533487 CHST13Q8NET6 341 aa24.46■■□□□ 1.51
VPS51-211ENST00000533487 GPCPD1Q9NPB8 672 aa24.46■■□□□ 1.51
VPS51-211ENST00000533487 FRMPD2Q68DX3 1309 aaPredicted RBP24.45■■□□□ 1.5
VPS51-211ENST00000533487 PALM3A6NDB9 673 aaPredicted RBP24.45■■□□□ 1.5
VPS51-211ENST00000533487 NFXL1Q6ZNB6 911 aa24.45■■□□□ 1.5
VPS51-211ENST00000533487 NCAPG2Q86XI2 1143 aa24.45■■□□□ 1.5
VPS51-211ENST00000533487 ZNF654Q8IZM8 581 aa24.45■■□□□ 1.5
VPS51-211ENST00000533487 USP6NLQ92738 828 aa24.45■■□□□ 1.5
VPS51-211ENST00000533487 JAKMIP1Q96N16 626 aaKnown RBP24.45■■□□□ 1.5
VPS51-211ENST00000533487 MAF1Q9H063 256 aa24.45■■□□□ 1.5
VPS51-211ENST00000533487 HPS5Q9UPZ3 1129 aa24.45■■□□□ 1.5
VPS51-211ENST00000533487 PTCH2Q9Y6C5 1203 aa24.45■■□□□ 1.5
VPS51-211ENST00000533487 ZNFX1Q9P2E3 1918 aaKnown RBP24.45■■□□□ 1.5
VPS51-211ENST00000533487 PEX10O60683 326 aa24.44■■□□□ 1.5
VPS51-211ENST00000533487 ICAM1P05362 532 aa24.44■■□□□ 1.5
VPS51-211ENST00000533487 HOXC6P09630 235 aa24.44■■□□□ 1.5
VPS51-211ENST00000533487 FCER1AP12319 257 aa24.44■■□□□ 1.5
VPS51-211ENST00000533487 SMARCA1P28370 1054 aa24.44■■□□□ 1.5
VPS51-211ENST00000533487 GNAQP50148 359 aa24.44■■□□□ 1.5
VPS51-211ENST00000533487 TRAF1Q13077 416 aa24.44■■□□□ 1.5
VPS51-211ENST00000533487 SLC9C1Q4G0N8 1177 aa24.44■■□□□ 1.5
VPS51-211ENST00000533487 WDR78Q5VTH9 848 aa24.44■■□□□ 1.5
VPS51-211ENST00000533487 TTBK2Q6IQ55 1244 aa24.44■■□□□ 1.5
VPS51-211ENST00000533487 SYNE3Q6ZMZ3 975 aa24.44■■□□□ 1.5
VPS51-211ENST00000533487 ARMC5Q96C12 935 aa24.44■■□□□ 1.5
VPS51-211ENST00000533487 IL17RAQ96F46 866 aa24.44■■□□□ 1.5
VPS51-211ENST00000533487 ABHD8Q96I13 439 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms