RNA–Protein interactions for RNA: ENST00000533325.5

ATG13-221, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 1,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-221ENST00000533325 ANKRD23Q86SG2 305 aa14.94□□□□□ -0.02
ATG13-221ENST00000533325 REM2Q8IYK8 340 aaPredicted RBP14.94□□□□□ -0.02
ATG13-221ENST00000533325 BRI3BPQ8WY22 251 aa14.94□□□□□ -0.02
ATG13-221ENST00000533325 NCOA5Q9HCD5 579 aaKnown RBP14.94□□□□□ -0.02
ATG13-221ENST00000533325 FAM217BQ9NTX9 383 aaPredicted RBP14.94□□□□□ -0.02
ATG13-221ENST00000533325 RBM19Q9Y4C8 960 aaKnown RBP14.94□□□□□ -0.02
ATG13-221ENST00000533325 RLFQ13129 1914 aa14.94□□□□□ -0.02
ATG13-221ENST00000533325 FLOT1O75955 427 aa14.93□□□□□ -0.02
ATG13-221ENST00000533325 CDKL5O76039 1030 aa14.93□□□□□ -0.02
ATG13-221ENST00000533325 SLC34A2O95436 690 aa14.93□□□□□ -0.02
ATG13-221ENST00000533325 OSBPP22059 807 aa14.93□□□□□ -0.02
ATG13-221ENST00000533325 IRX3P78415 501 aaPredicted RBP14.93□□□□□ -0.02
ATG13-221ENST00000533325 KIF23Q02241 960 aaPredicted RBP14.93□□□□□ -0.02
ATG13-221ENST00000533325 COG2Q14746 738 aa14.93□□□□□ -0.02
ATG13-221ENST00000533325 OTUD7BQ6GQQ9 843 aa14.93□□□□□ -0.02
ATG13-221ENST00000533325 TTBK2Q6IQ55 1244 aa14.93□□□□□ -0.02
ATG13-221ENST00000533325 GPAT2Q6NUI2 795 aa14.93□□□□□ -0.02
ATG13-221ENST00000533325 CCDC83Q8IWF9 413 aa14.93□□□□□ -0.02
ATG13-221ENST00000533325 PRPF38AQ8NAV1 312 aaKnown RBP14.93□□□□□ -0.02
ATG13-221ENST00000533325 SLF1Q9BQI6 1058 aa14.93□□□□□ -0.02
ATG13-221ENST00000533325 HOXC10Q9NYD6 342 aa14.93□□□□□ -0.02
ATG13-221ENST00000533325 PNMA3Q9UL41 463 aa14.93□□□□□ -0.02
ATG13-221ENST00000533325 SLC45A1Q9Y2W3 748 aa14.93□□□□□ -0.02
ATG13-221ENST00000533325 WDR33Q9C0J8 1336 aaKnown RBP14.92□□□□□ -0.02
ATG13-221ENST00000533325 BTBD19C9JJ37 291 aa14.92□□□□□ -0.02
ATG13-221ENST00000533325 PLEKHA8P1O95397 391 aa14.92□□□□□ -0.02
ATG13-221ENST00000533325 IFNAR1P17181 557 aa14.92□□□□□ -0.02
ATG13-221ENST00000533325 SLC16A2P36021 539 aa14.92□□□□□ -0.02
ATG13-221ENST00000533325 SYDE2Q5VT97 1194 aa14.92□□□□□ -0.02
ATG13-221ENST00000533325 SRBD1Q8N5C6 995 aaKnown RBP14.92□□□□□ -0.02
ATG13-221ENST00000533325 SPZ1Q9BXG8 430 aa14.92□□□□□ -0.02
ATG13-221ENST00000533325 UBA5Q9GZZ9 404 aa14.92□□□□□ -0.02
ATG13-221ENST00000533325 ZCCHC17Q9NP64 241 aaKnown RBP14.92□□□□□ -0.02
ATG13-221ENST00000533325 COL11A1P12107 1806 aaPredicted RBP14.92□□□□□ -0.02
ATG13-221ENST00000533325 MYPNQ86TC9 1320 aa14.92□□□□□ -0.02
ATG13-221ENST00000533325 PDHXO00330 501 aa14.91□□□□□ -0.02
ATG13-221ENST00000533325 FDX1P10109 184 aa14.91□□□□□ -0.02
ATG13-221ENST00000533325 DSG3P32926 999 aa14.91□□□□□ -0.02
ATG13-221ENST00000533325 MAP2K2P36507 400 aa14.91□□□□□ -0.02
ATG13-221ENST00000533325 TM4SF4P48230 202 aa14.91□□□□□ -0.02
ATG13-221ENST00000533325 VEGFBP49765 207 aa14.91□□□□□ -0.02
ATG13-221ENST00000533325 SSRP1Q08945 709 aaKnown RBP14.91□□□□□ -0.02
ATG13-221ENST00000533325 NTRK3Q16288 839 aa14.91□□□□□ -0.02
ATG13-221ENST00000533325 SAMD1Q6SPF0 538 aaPredicted RBP14.91□□□□□ -0.02
ATG13-221ENST00000533325 TRIM22Q8IYM9 498 aa14.91□□□□□ -0.02
ATG13-221ENST00000533325 CMTR1Q8N1G2 835 aaKnown RBP14.91□□□□□ -0.02
ATG13-221ENST00000533325 CCDC82Q8N4S0 544 aa14.91□□□□□ -0.02
ATG13-221ENST00000533325 KIFC2Q96AC6 838 aa14.91□□□□□ -0.02
ATG13-221ENST00000533325 LLPHQ9BRT6 129 aaKnown RBP14.91□□□□□ -0.02
ATG13-221ENST00000533325 RIOX1Q9H6W3 641 aa14.91□□□□□ -0.02
ATG13-221ENST00000533325 VAT1LQ9HCJ6 419 aa14.91□□□□□ -0.02
ATG13-221ENST00000533325 FBXO28Q9NVF7 368 aa14.91□□□□□ -0.02
ATG13-221ENST00000533325 PPP1R9AQ9ULJ8 1098 aa14.91□□□□□ -0.02
ATG13-221ENST00000533325 PRR12Q9ULL5 1215 aa14.91□□□□□ -0.02
ATG13-221ENST00000533325 CTDP1Q9Y5B0 961 aaPredicted RBP14.91□□□□□ -0.02
ATG13-221ENST00000533325 AOC2O75106 756 aa14.9□□□□□ -0.02
ATG13-221ENST00000533325 AKAP17AQ02040 695 aaKnown RBP14.9□□□□□ -0.02
ATG13-221ENST00000533325 CUL4AQ13619 759 aa14.9□□□□□ -0.02
ATG13-221ENST00000533325 NBPF11Q86T75 865 aa14.9□□□□□ -0.02
ATG13-221ENST00000533325 IFNL1Q8IU54 200 aa14.9□□□□□ -0.02
ATG13-221ENST00000533325 ADGRF4Q8IZF3 695 aa14.9□□□□□ -0.02
ATG13-221ENST00000533325 RRP36Q96EU6 259 aaKnown RBP14.9□□□□□ -0.02
ATG13-221ENST00000533325 P2RX7Q99572 595 aaKnown RBP14.9□□□□□ -0.02
ATG13-221ENST00000533325 PTPN18Q99952 460 aa14.9□□□□□ -0.02
ATG13-221ENST00000533325 ASCC2Q9H1I8 757 aaPredicted RBP14.9□□□□□ -0.02
ATG13-221ENST00000533325 CPVLQ9H3G5 476 aa14.9□□□□□ -0.02
ATG13-221ENST00000533325 RBM27Q9P2N5 1060 aaKnown RBP14.9□□□□□ -0.02
ATG13-221ENST00000533325 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.9□□□□□ -0.02
ATG13-221ENST00000533325 CNTNAP5Q8WYK1 1306 aa14.9□□□□□ -0.02
ATG13-221ENST00000533325 IGF2BP3O00425 579 aaKnown RBP eCLIP14.89□□□□□ -0.03
ATG13-221ENST00000533325 PRPF3O43395 683 aaKnown RBP14.89□□□□□ -0.03
ATG13-221ENST00000533325 ZBED4O75132 1171 aa14.89□□□□□ -0.03
ATG13-221ENST00000533325 HSP90AA1P07900 732 aaKnown RBP14.89□□□□□ -0.03
ATG13-221ENST00000533325 FUT2Q10981 343 aa14.89□□□□□ -0.03
ATG13-221ENST00000533325 ST3GAL1Q11201 340 aa14.89□□□□□ -0.03
ATG13-221ENST00000533325 FAM43AQ8N2R8 423 aa14.89□□□□□ -0.03
ATG13-221ENST00000533325 NSUN7Q8NE18 718 aaKnown RBP14.89□□□□□ -0.03
ATG13-221ENST00000533325 GTF3C2Q8WUA4 911 aaPredicted RBP14.89□□□□□ -0.03
ATG13-221ENST00000533325 ZIC5Q96T25 663 aa14.89□□□□□ -0.03
ATG13-221ENST00000533325 PARK7Q99497 189 aaKnown RBP14.89□□□□□ -0.03
ATG13-221ENST00000533325 SLC26A6Q9BXS9 759 aa14.89□□□□□ -0.03
ATG13-221ENST00000533325 RNF26Q9BY78 433 aaPredicted RBP14.89□□□□□ -0.03
ATG13-221ENST00000533325 JMJD4Q9H9V9 463 aa14.89□□□□□ -0.03
ATG13-221ENST00000533325 SEC63Q9UGP8 760 aaKnown RBP14.89□□□□□ -0.03
ATG13-221ENST00000533325 V9GY48 417 aaPredicted RBP14.89□□□□□ -0.03
ATG13-221ENST00000533325 SPDYE16A6NNV3 312 aaPredicted RBP14.88□□□□□ -0.03
ATG13-221ENST00000533325 CYTH3O43739 400 aa14.88□□□□□ -0.03
ATG13-221ENST00000533325 FMNL1O95466 1100 aaPredicted RBP14.88□□□□□ -0.03
ATG13-221ENST00000533325 CTDNEP1O95476 244 aa14.88□□□□□ -0.03
ATG13-221ENST00000533325 ALDH1A1P00352 501 aa14.88□□□□□ -0.03
ATG13-221ENST00000533325 HERVK_113P62684 666 aa14.88□□□□□ -0.03
ATG13-221ENST00000533325 HMGN5P82970 282 aaKnown RBP14.88□□□□□ -0.03
ATG13-221ENST00000533325 SLC35G1Q2M3R5 365 aa14.88□□□□□ -0.03
ATG13-221ENST00000533325 MB21D1Q8N884 522 aa14.88□□□□□ -0.03
ATG13-221ENST00000533325 PIBF1Q8WXW3 757 aa14.88□□□□□ -0.03
ATG13-221ENST00000533325 PHKBQ93100 1093 aa14.88□□□□□ -0.03
ATG13-221ENST00000533325 ATG4CQ96DT6 458 aa14.88□□□□□ -0.03
ATG13-221ENST00000533325 MTMR8Q96EF0 704 aa14.88□□□□□ -0.03
ATG13-221ENST00000533325 INTS4Q96HW7 963 aaKnown RBP14.88□□□□□ -0.03
ATG13-221ENST00000533325 PIGSQ96S52 555 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms