RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 SAPCD2Q86UD0 394 aa16.33■□□□□ 0.2
HIF3A-215ENST00000533145 ADGRF4Q8IZF3 695 aa16.33■□□□□ 0.2
HIF3A-215ENST00000533145 FAM177A1Q8N128 213 aaPredicted RBP16.33■□□□□ 0.2
HIF3A-215ENST00000533145 CCDC82Q8N4S0 544 aa16.33■□□□□ 0.2
HIF3A-215ENST00000533145 FAM184AQ8NB25 1140 aa16.33■□□□□ 0.2
HIF3A-215ENST00000533145 DDX11Q96FC9 970 aa16.33■□□□□ 0.2
HIF3A-215ENST00000533145 WNK4Q96J92 1243 aa16.33■□□□□ 0.2
HIF3A-215ENST00000533145 HHIPL1Q96JK4 782 aa16.33■□□□□ 0.2
HIF3A-215ENST00000533145 NUP88Q99567 741 aaPredicted RBP16.33■□□□□ 0.2
HIF3A-215ENST00000533145 TLL2Q9Y6L7 1015 aa16.33■□□□□ 0.2
HIF3A-215ENST00000533145 ZBTB48P10074 688 aaPredicted RBP16.32■□□□□ 0.2
HIF3A-215ENST00000533145 HUNKP57058 714 aa16.32■□□□□ 0.2
HIF3A-215ENST00000533145 PFKFB3Q16875 520 aaPredicted RBP16.32■□□□□ 0.2
HIF3A-215ENST00000533145 SYDE2Q5VT97 1194 aa16.32■□□□□ 0.2
HIF3A-215ENST00000533145 FASTKD5Q7L8L6 764 aaKnown RBP16.32■□□□□ 0.2
HIF3A-215ENST00000533145 JMJD4Q9H9V9 463 aa16.32■□□□□ 0.2
HIF3A-215ENST00000533145 TMEM88BA6NKF7 163 aa16.31■□□□□ 0.2
HIF3A-215ENST00000533145 FDX1P10109 184 aa16.31■□□□□ 0.2
HIF3A-215ENST00000533145 HOXA7P31268 230 aaPredicted RBP16.31■□□□□ 0.2
HIF3A-215ENST00000533145 SLC16A2P36021 539 aa16.31■□□□□ 0.2
HIF3A-215ENST00000533145 SNAPC2Q13487 334 aa16.31■□□□□ 0.2
HIF3A-215ENST00000533145 MOGSQ13724 837 aa16.31■□□□□ 0.2
HIF3A-215ENST00000533145 SPRYD7Q5W111 196 aa16.31■□□□□ 0.2
HIF3A-215ENST00000533145 LARP1BQ659C4 914 aaKnown RBP16.31■□□□□ 0.2
HIF3A-215ENST00000533145 CATSPERGQ6ZRH7 1159 aa16.31■□□□□ 0.2
HIF3A-215ENST00000533145 PRPF38AQ8NAV1 312 aaKnown RBP16.31■□□□□ 0.2
HIF3A-215ENST00000533145 RRP36Q96EU6 259 aaKnown RBP16.31■□□□□ 0.2
HIF3A-215ENST00000533145 CPVLQ9H3G5 476 aa16.31■□□□□ 0.2
HIF3A-215ENST00000533145 RPAP3Q9H6T3 665 aaPredicted RBP16.31■□□□□ 0.2
HIF3A-215ENST00000533145 SH3GLB2Q9NR46 395 aa16.31■□□□□ 0.2
HIF3A-215ENST00000533145 PRR12Q9ULL5 1215 aa16.31■□□□□ 0.2
HIF3A-215ENST00000533145 MYPNQ86TC9 1320 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 PNMA6FA0A0J9YX94 578 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 USP17L15C9J2P7 530 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 USP17L13C9JLJ4 530 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 USP17L11C9JVI0 530 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 USP17L18D6R9N7 530 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 USP17L22D6RA61 530 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 USP17L17D6RBQ6 530 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 USP17L19D6RCP7 530 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 USP17L20D6RJB6 530 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 hCG_1984214I3L0E3 225 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 DTNBO60941 627 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 SCG2P13521 617 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 SYT1P21579 422 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 GTF2A2P52657 109 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 USP17L24Q0WX57 530 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 DGKZQ13574 1117 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 RGMBQ6NW40 437 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 ZNF713Q8N859 430 aaPredicted RBP16.3■□□□□ 0.2
HIF3A-215ENST00000533145 MS4A4AQ96JQ5 239 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 ALG1Q9BT22 464 aa16.3■□□□□ 0.2
HIF3A-215ENST00000533145 ZBTB5O15062 677 aa16.29■□□□□ 0.2
HIF3A-215ENST00000533145 PPFIA3O75145 1194 aa16.29■□□□□ 0.2
HIF3A-215ENST00000533145 NUCB2P80303 420 aa16.29■□□□□ 0.2
HIF3A-215ENST00000533145 COG2Q14746 738 aa16.29■□□□□ 0.2
HIF3A-215ENST00000533145 FBXO18Q8NFZ0 1043 aa16.29■□□□□ 0.2
HIF3A-215ENST00000533145 PIGSQ96S52 555 aa16.29■□□□□ 0.2
HIF3A-215ENST00000533145 SLF1Q9BQI6 1058 aa16.29■□□□□ 0.2
HIF3A-215ENST00000533145 RANBP17Q9H2T7 1088 aaKnown RBP16.29■□□□□ 0.2
HIF3A-215ENST00000533145 VAT1LQ9HCJ6 419 aa16.29■□□□□ 0.2
HIF3A-215ENST00000533145 CHMP5Q9NZZ3 219 aa16.29■□□□□ 0.2
HIF3A-215ENST00000533145 PPP1R9AQ9ULJ8 1098 aa16.29■□□□□ 0.2
HIF3A-215ENST00000533145 ADAMTS5Q9UNA0 930 aa16.29■□□□□ 0.2
HIF3A-215ENST00000533145 TESPA1A2RU30 521 aaPredicted RBP16.28■□□□□ 0.2
HIF3A-215ENST00000533145 STX6O43752 255 aa16.28■□□□□ 0.2
HIF3A-215ENST00000533145 CETPP11597 493 aa16.28■□□□□ 0.2
HIF3A-215ENST00000533145 XBP1P17861 261 aa16.28■□□□□ 0.2
HIF3A-215ENST00000533145 DSG3P32926 999 aa16.28■□□□□ 0.2
HIF3A-215ENST00000533145 IKQ13123 557 aaPredicted RBP16.28■□□□□ 0.2
HIF3A-215ENST00000533145 GPAT2Q6NUI2 795 aa16.28■□□□□ 0.2
HIF3A-215ENST00000533145 RASAL3Q86YV0 1011 aa16.28■□□□□ 0.2
HIF3A-215ENST00000533145 C8orf76Q96K31 380 aa16.28■□□□□ 0.2
HIF3A-215ENST00000533145 FBXO28Q9NVF7 368 aa16.28■□□□□ 0.2
HIF3A-215ENST00000533145 HOXC10Q9NYD6 342 aa16.28■□□□□ 0.2
HIF3A-215ENST00000533145 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.28■□□□□ 0.2
HIF3A-215ENST00000533145 SEC63Q9UGP8 760 aaKnown RBP16.28■□□□□ 0.2
HIF3A-215ENST00000533145 ISY1Q9ULR0 285 aaKnown RBP16.28■□□□□ 0.2
HIF3A-215ENST00000533145 AGTPBP1Q9UPW5 1226 aa16.28■□□□□ 0.2
HIF3A-215ENST00000533145 SLC45A1Q9Y2W3 748 aa16.28■□□□□ 0.2
HIF3A-215ENST00000533145 hCG_1642624A0A1W2PR95 340 aa16.27■□□□□ 0.2
HIF3A-215ENST00000533145 FLOT1O75955 427 aa16.27■□□□□ 0.2
HIF3A-215ENST00000533145 BRD1O95696 1058 aa16.27■□□□□ 0.2
HIF3A-215ENST00000533145 ZNF157P51786 506 aaPredicted RBP16.27■□□□□ 0.2
HIF3A-215ENST00000533145 TRAF1Q13077 416 aa16.27■□□□□ 0.2
HIF3A-215ENST00000533145 PABPC4Q13310 644 aaKnown RBP eCLIP16.27■□□□□ 0.2
HIF3A-215ENST00000533145 CDC37Q16543 378 aaPredicted RBP16.27■□□□□ 0.2
HIF3A-215ENST00000533145 QRICH1Q2TAL8 776 aa16.27■□□□□ 0.2
HIF3A-215ENST00000533145 GADL1Q6ZQY3 521 aa16.27■□□□□ 0.2
HIF3A-215ENST00000533145 CCDC102AQ96A19 550 aa16.27■□□□□ 0.2
HIF3A-215ENST00000533145 AIFM3Q96NN9 605 aa16.27■□□□□ 0.2
HIF3A-215ENST00000533145 TANGO6Q9C0B7 1094 aa16.27■□□□□ 0.2
HIF3A-215ENST00000533145 BARHL2Q9NY43 387 aa16.27■□□□□ 0.2
HIF3A-215ENST00000533145 PNMA2Q9UL42 364 aa16.27■□□□□ 0.2
HIF3A-215ENST00000533145 COL11A1P12107 1806 aaPredicted RBP16.26■□□□□ 0.19
HIF3A-215ENST00000533145 SMCHD1A6NHR9 2005 aa16.26■□□□□ 0.19
HIF3A-215ENST00000533145 SLC10A3P09131 477 aa16.26■□□□□ 0.19
HIF3A-215ENST00000533145 TREML2Q5T2D2 321 aa16.26■□□□□ 0.19
HIF3A-215ENST00000533145 KRT40Q6A162 431 aa16.26■□□□□ 0.19
HIF3A-215ENST00000533145 WWC2Q6AWC2 1192 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms