RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 SP3Q02447 781 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 APOBRQ0VD83 1088 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 GRM4Q14833 912 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 NOM1Q5C9Z4 860 aaKnown RBP13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 TTBK2Q6IQ55 1244 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 APOA5Q6Q788 366 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 BTNL9Q6UXG8 535 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 RASGRP2Q7LDG7 609 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 FANCBQ8NB91 859 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 IL27Q8NEV9 243 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 ATG4CQ96DT6 458 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 KIF2CQ99661 725 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 PAGR1Q9BTK6 254 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 MYL10Q9BUA6 226 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 RBPJLQ9UBG7 517 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 MAD2L2Q9UI95 211 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 ADAMTS5Q9UNA0 930 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 PCNTO95613 3336 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 FOXN1O15353 648 aa13.09□□□□□ -0.31
TRAPPC4-211ENST00000533012 FKTNO75072 461 aa13.09□□□□□ -0.31
TRAPPC4-211ENST00000533012 BCRP11274 1271 aa13.09□□□□□ -0.31
TRAPPC4-211ENST00000533012 RCAN1P53805 252 aa13.09□□□□□ -0.31
TRAPPC4-211ENST00000533012 TOB2Q14106 344 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC4-211ENST00000533012 PPP2R5BQ15173 497 aa13.09□□□□□ -0.31
TRAPPC4-211ENST00000533012 RABEP1Q15276 862 aa13.09□□□□□ -0.31
TRAPPC4-211ENST00000533012 FAM110CQ1W6H9 321 aa13.09□□□□□ -0.31
TRAPPC4-211ENST00000533012 SYDE2Q5VT97 1194 aa13.09□□□□□ -0.31
TRAPPC4-211ENST00000533012 MICU3Q86XE3 530 aa13.09□□□□□ -0.31
TRAPPC4-211ENST00000533012 CCAR1Q8IX12 1150 aaKnown RBP13.09□□□□□ -0.31
TRAPPC4-211ENST00000533012 STAG2Q8N3U4 1231 aa13.09□□□□□ -0.31
TRAPPC4-211ENST00000533012 LZTS2Q9BRK4 669 aa13.09□□□□□ -0.31
TRAPPC4-211ENST00000533012 UBA5Q9GZZ9 404 aa13.09□□□□□ -0.31
TRAPPC4-211ENST00000533012 MORF4L1Q9UBU8 362 aa13.09□□□□□ -0.31
TRAPPC4-211ENST00000533012 PRR12Q9ULL5 1215 aa13.09□□□□□ -0.31
TRAPPC4-211ENST00000533012 ADGRA2Q96PE1 1338 aa13.09□□□□□ -0.31
TRAPPC4-211ENST00000533012 CCDC196A0A1B0GTZ2 297 aa13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 DHX16O60231 1041 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 RXRAP19793 462 aa13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 AK2P54819 239 aa13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 EVCP57679 992 aa13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 ERVK-9P63128 1117 aa13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 ERVK-24P63145 666 aa13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 CCNA1P78396 465 aa13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 PLS1Q14651 629 aa13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 KIF22Q14807 665 aa13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 ARHGEF6Q15052 776 aa13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 POTEEQ6S8J3 1075 aa13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 RAB11FIP4Q86YS3 637 aa13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 CCDC144CPQ8IYA2 1237 aa13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 ZNF274Q96GC6 653 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 LARP6Q9BRS8 491 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 SLC38A10Q9HBR0 1119 aa13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 VAT1LQ9HCJ6 419 aa13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 TXNRD2Q9NNW7 524 aa13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 RBM28Q9NW13 759 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 BTBD7Q9P203 1132 aa13.08□□□□□ -0.32
TRAPPC4-211ENST00000533012 LOC285556D6RIA3 1793 aa13.07□□□□□ -0.32
TRAPPC4-211ENST00000533012 GOLGA8AA7E2F4 631 aa13.07□□□□□ -0.32
TRAPPC4-211ENST00000533012 GOLGA8BA8MQT2 603 aa13.07□□□□□ -0.32
TRAPPC4-211ENST00000533012 CNMDO75829 334 aa13.07□□□□□ -0.32
TRAPPC4-211ENST00000533012 HSPA8P11142 646 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-211ENST00000533012 SMARCA1P28370 1054 aa13.07□□□□□ -0.32
TRAPPC4-211ENST00000533012 PDIA3P30101 505 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-211ENST00000533012 STAT3P40763 770 aa13.07□□□□□ -0.32
TRAPPC4-211ENST00000533012 METAP2P50579 478 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAPPC4-211ENST00000533012 LBX1P52954 281 aa13.07□□□□□ -0.32
TRAPPC4-211ENST00000533012 TMEM132BQ14DG7 1078 aa13.07□□□□□ -0.32
TRAPPC4-211ENST00000533012 RTN1Q16799 776 aa13.07□□□□□ -0.32
TRAPPC4-211ENST00000533012 Q3C1V9 767 aa13.07□□□□□ -0.32
TRAPPC4-211ENST00000533012 ADGRF4Q8IZF3 695 aa13.07□□□□□ -0.32
TRAPPC4-211ENST00000533012 CPXCR1Q8N123 301 aa13.07□□□□□ -0.32
TRAPPC4-211ENST00000533012 ZNF296Q8WUU4 475 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC4-211ENST00000533012 CPVLQ9H3G5 476 aa13.07□□□□□ -0.32
TRAPPC4-211ENST00000533012 PNMA2Q9UL42 364 aa13.07□□□□□ -0.32
TRAPPC4-211ENST00000533012 ATP2A1O14983 1001 aa13.06□□□□□ -0.32
TRAPPC4-211ENST00000533012 ST18O60284 1047 aa13.06□□□□□ -0.32
TRAPPC4-211ENST00000533012 PEX10O60683 326 aa13.06□□□□□ -0.32
TRAPPC4-211ENST00000533012 OAZ1P54368 228 aa13.06□□□□□ -0.32
TRAPPC4-211ENST00000533012 SNAP25P60880 206 aa13.06□□□□□ -0.32
TRAPPC4-211ENST00000533012 LACTBP83111 547 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC4-211ENST00000533012 REPS2Q8NFH8 660 aa13.06□□□□□ -0.32
TRAPPC4-211ENST00000533012 ERO1AQ96HE7 468 aa13.06□□□□□ -0.32
TRAPPC4-211ENST00000533012 SPATC1LQ9H0A9 340 aa13.06□□□□□ -0.32
TRAPPC4-211ENST00000533012 RANBP17Q9H2T7 1088 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-211ENST00000533012 RIOX1Q9H6W3 641 aa13.06□□□□□ -0.32
TRAPPC4-211ENST00000533012 JMJD4Q9H9V9 463 aa13.06□□□□□ -0.32
TRAPPC4-211ENST00000533012 CWC22Q9HCG8 908 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-211ENST00000533012 RAVER2Q9HCJ3 691 aaKnown RBP13.06□□□□□ -0.32
TRAPPC4-211ENST00000533012 PTPRFP10586 1907 aa13.05□□□□□ -0.32
TRAPPC4-211ENST00000533012 MYH4Q9Y623 1939 aa13.05□□□□□ -0.32
TRAPPC4-211ENST00000533012 FMNL1O95466 1100 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC4-211ENST00000533012 SLC25A27O95847 323 aa13.05□□□□□ -0.32
TRAPPC4-211ENST00000533012 ADD1P35611 737 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-211ENST00000533012 SLC4A3P48751 1232 aa13.05□□□□□ -0.32
TRAPPC4-211ENST00000533012 FCGRTP55899 365 aa13.05□□□□□ -0.32
TRAPPC4-211ENST00000533012 CCT2P78371 535 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-211ENST00000533012 CCDC174Q6PII3 467 aa13.05□□□□□ -0.32
TRAPPC4-211ENST00000533012 NBPF11Q86T75 865 aa13.05□□□□□ -0.32
TRAPPC4-211ENST00000533012 NCAPG2Q86XI2 1143 aa13.05□□□□□ -0.32
TRAPPC4-211ENST00000533012 RIOX2Q8IUF8 465 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms