RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 C6orf229H3BNL8 230 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 HAS3O00219 553 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 SNPHO15079 494 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 ADCY3O60266 1144 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 CXCL10P02778 98 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 DNAJB1P25685 340 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 HERVK_113P62684 666 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 SLC39A5Q6ZMH5 540 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 TBC1D9Q6ZT07 1266 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 ERO1AQ96HE7 468 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 RNF208Q9H0X6 261 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 PIH1D3Q9NQM4 214 aaKnown RBP2.29□□□□□ -2.04
KNL1-211ENST00000533001 FBXO28Q9NVF7 368 aa2.29□□□□□ -2.04
KNL1-211ENST00000533001 TTF2Q9UNY4 1162 aaKnown RBP2.29□□□□□ -2.04
KNL1-211ENST00000533001 MYOFQ9NZM1 2061 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 EIF2S2P20042 333 aaKnown RBP2.28□□□□□ -2.04
KNL1-211ENST00000533001 GTF2A2P52657 109 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 BACE1P56817 501 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 TAF1CQ15572 869 aaPredicted RBP2.28□□□□□ -2.04
KNL1-211ENST00000533001 SLC9C1Q4G0N8 1177 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 CATSPERGQ6ZRH7 1159 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 LPAR1Q92633 364 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 PA2G4Q9UQ80 394 aaKnown RBP2.28□□□□□ -2.04
KNL1-211ENST00000533001 RFXAPO00287 272 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 ARIH2O95376 493 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 MECOMQ03112 1051 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 SREBF2Q12772 1141 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 SEMA3FQ13275 785 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 BMP8AQ7Z5Y6 402 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 ANKRD18AQ8IVF6 992 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 ANKRD13CQ8N6S4 541 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 MAML3Q96JK9 1138 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 ZNF341Q9BYN7 854 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 CLEC1BQ9P126 229 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 IQSEC3Q9UPP2 1182 aaPredicted RBP2.28□□□□□ -2.04
KNL1-211ENST00000533001 NDUFB9Q9Y6M9 179 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 MGAM2Q2M2H8 2515 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 KAT6AQ92794 2004 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 MROH7-TTC4A0A0A0MT08 1334 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 MIA3Q5JRA6 1907 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.28□□□□□ -2.04
KNL1-211ENST00000533001 ERC2O15083 957 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 B4GALT3O60512 393 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 CIAO1O76071 339 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 TDGF1P13385 188 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 PRKAR2AP13861 404 aaKnown RBP2.28□□□□□ -2.04
KNL1-211ENST00000533001 HTRA4P83105 476 aaPredicted RBP2.28□□□□□ -2.04
KNL1-211ENST00000533001 GPR142Q7Z601 462 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 FAM178BQ8IXR5 827 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 CRYGNQ8WXF5 182 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 CHFRQ96EP1 664 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 CEP89Q96ST8 783 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 C7P10643 843 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 EXOSC9Q06265 439 aaKnown RBP2.28□□□□□ -2.04
KNL1-211ENST00000533001 AIDAQ96BJ3 306 aa2.28□□□□□ -2.04
KNL1-211ENST00000533001 EPB41L4AQ9HCS5 686 aaPredicted RBP2.28□□□□□ -2.04
KNL1-211ENST00000533001 ZNF638Q14966 1978 aaKnown RBP2.28□□□□□ -2.05
KNL1-211ENST00000533001 RYR1P21817 5038 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 SOWAHBA6NEL2 793 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 CTNND1O60716 968 aaKnown RBP2.27□□□□□ -2.05
KNL1-211ENST00000533001 VCAM1P19320 739 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 LMOD1P29536 600 aaPredicted RBP2.27□□□□□ -2.05
KNL1-211ENST00000533001 CYP2C19P33261 490 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 TAP1Q03518 808 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 GRM1Q13255 1194 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 TRIM60Q495X7 471 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 CCDC152Q4G0S7 254 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 SLC44A5Q8NCS7 719 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 SUSD6Q92537 303 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 PURBQ96QR8 312 aaKnown RBP2.27□□□□□ -2.05
KNL1-211ENST00000533001 KIAA1683Q9H0B3 1180 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 EHD4Q9H223 541 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 FBXO3Q9UK99 471 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 SYNRGQ9UMZ2 1314 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 TSC2P49815 1807 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 EYA2O00167 538 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 NBNO60934 754 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 SNHG28P0DPA3 235 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 SLFN5Q08AF3 891 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 SLC10A4Q96EP9 437 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 MOV10L1Q9BXT6 1211 aaKnown RBP2.27□□□□□ -2.05
KNL1-211ENST00000533001 IL17RBQ9NRM6 502 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 TAF6LQ9Y6J9 622 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 NCANO14594 1321 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 ALDH1L1O75891 902 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 HMGCRP04035 888 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 PTPREP23469 700 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 PDE4AP27815 886 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 ERVK-9P63128 1117 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 ERVK-24P63145 666 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 PRAMEF19Q5SWL8 479 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 HFE2Q6ZVN8 426 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 EDC3Q96F86 508 aaKnown RBP2.27□□□□□ -2.05
KNL1-211ENST00000533001 NOC4LQ9BVI4 516 aaKnown RBP2.27□□□□□ -2.05
KNL1-211ENST00000533001 FN1P02751 2386 aaKnown RBP2.27□□□□□ -2.05
KNL1-211ENST00000533001 MYH9P35579 1960 aaKnown RBP2.27□□□□□ -2.05
KNL1-211ENST00000533001 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.27□□□□□ -2.05
KNL1-211ENST00000533001 DNM1LO00429 736 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 TLE2Q04725 743 aa2.27□□□□□ -2.05
KNL1-211ENST00000533001 SPP2Q13103 211 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms