RNA–Protein interactions for RNA: ENST00000532443.1

PPFIA1-221, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 4

Gene PPFIA1, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-221ENST00000532443 KRT82Q9NSB4 513 aa6.91□□□□□ -1.3
PPFIA1-221ENST00000532443 ATG3Q9NT62 314 aa6.91□□□□□ -1.3
PPFIA1-221ENST00000532443 SAMM50Q9Y512 469 aa6.91□□□□□ -1.3
PPFIA1-221ENST00000532443 FANCIQ9NVI1 1328 aa6.91□□□□□ -1.3
PPFIA1-221ENST00000532443 ABCC6O95255 1503 aa6.91□□□□□ -1.3
PPFIA1-221ENST00000532443 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 PRR19A6NJB7 356 aa6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 GNAT3A8MTJ3 354 aa6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 DCDC2CA8MYV0 355 aa6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 BMP6P22004 513 aa6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 RARSP54136 660 aaKnown RBP6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 ZC3H6P61129 1189 aaKnown RBP6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 EXOSC9Q06265 439 aaKnown RBP6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 ZNF252P-AS1Q0IIN9 211 aa6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 COL19A1Q14993 1142 aa6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 CCDC85BQ15834 202 aaPredicted RBP6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 ALDH1L2Q3SY69 923 aa6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 AMOTQ4VCS5 1084 aa6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 PLEKHO1Q53GL0 409 aaPredicted RBP6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 MEI1Q5TIA1 1274 aa6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 LLGL2Q6P1M3 1020 aa6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 FRMD6Q96NE9 622 aa6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 OSBPL1AQ9BXW6 950 aa6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 DISC1Q9NRI5 854 aa6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 BABAM1Q9NWV8 329 aa6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 LAS1LQ9Y4W2 734 aaKnown RBP6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 PCDHGC5Q9Y5F6 944 aa6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 AK5Q9Y6K8 562 aa6.9□□□□□ -1.3
PPFIA1-221ENST00000532443 CPDO75976 1380 aa6.9□□□□□ -1.31
PPFIA1-221ENST00000532443 PLEKHG2Q9H7P9 1386 aa6.9□□□□□ -1.31
PPFIA1-221ENST00000532443 MED1Q15648 1581 aaPredicted RBP6.9□□□□□ -1.31
PPFIA1-221ENST00000532443 LTN1O94822 1766 aa6.9□□□□□ -1.31
PPFIA1-221ENST00000532443 IPO8O15397 1037 aaKnown RBP6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 ZNF853P0CG23 659 aa6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 HOXA10P31260 410 aaPredicted RBP6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 CDK5R2Q13319 367 aa6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 MTHFSDQ2M296 383 aaKnown RBP6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 NBPF6Q5VWK0 638 aa6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 FBXO33Q7Z6M2 555 aa6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 ZAR1Q86SH2 424 aa6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 NBPF11Q86T75 865 aa6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 SLC51AQ86UW1 340 aa6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 GIMAP7Q8NHV1 300 aa6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 DDX17Q92841 729 aaKnown RBP6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 TSR2Q969E8 191 aaKnown RBP6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 LRRC59Q96AG4 307 aaKnown RBP6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 CCDC136Q96JN2 1154 aa6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 NBPF4Q96M43 638 aa6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 CHMP4AQ9BY43 222 aa6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 GSX1Q9H4S2 264 aaPredicted RBP6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 PICK1Q9NRD5 415 aa6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 PCDHA4Q9UN74 947 aa6.89□□□□□ -1.31
PPFIA1-221ENST00000532443 MAP3K5Q99683 1374 aa6.88□□□□□ -1.31
PPFIA1-221ENST00000532443 KIF16BQ96L93 1317 aa6.88□□□□□ -1.31
PPFIA1-221ENST00000532443 CHL1O00533 1208 aa6.88□□□□□ -1.31
PPFIA1-221ENST00000532443 PLIN1O60240 522 aa6.88□□□□□ -1.31
PPFIA1-221ENST00000532443 TOM1O60784 492 aa6.88□□□□□ -1.31
PPFIA1-221ENST00000532443 COBLO75128 1261 aa6.88□□□□□ -1.31
PPFIA1-221ENST00000532443 BCAR3O75815 825 aa6.88□□□□□ -1.31
PPFIA1-221ENST00000532443 CD97P48960 835 aa6.88□□□□□ -1.31
PPFIA1-221ENST00000532443 ZKSCAN2Q63HK3 967 aa6.88□□□□□ -1.31
PPFIA1-221ENST00000532443 SMYD4Q8IYR2 804 aaPredicted RBP6.88□□□□□ -1.31
PPFIA1-221ENST00000532443 LRRC4CQ9HCJ2 640 aa6.88□□□□□ -1.31
PPFIA1-221ENST00000532443 SSU72Q9NP77 194 aaKnown RBP6.88□□□□□ -1.31
PPFIA1-221ENST00000532443 LEMD3Q9Y2U8 911 aa6.88□□□□□ -1.31
PPFIA1-221ENST00000532443 NCAPD2Q15021 1401 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 KIAA0232Q92628 1395 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 SOS1Q07889 1333 aaPredicted RBP6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 F6X3S4 739 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 GRIK1P39086 918 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 DAB2P98082 770 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 FGD1P98174 961 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 PTPN11Q06124 597 aaPredicted RBP6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 LRRC14Q15048 493 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 ZC3H12AQ5D1E8 599 aaKnown RBP6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 PPM1JQ5JR12 505 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 C1orf141Q5JVX7 400 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 TTBK2Q6IQ55 1244 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 ZNF765Q7L2R6 523 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 C12orf40Q86WS4 652 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 EXOC6Q8TAG9 804 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 RAPGEF4Q8WZA2 1011 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 FRAT1Q92837 279 aaPredicted RBP6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 GATA6Q92908 595 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 CHMP4BQ9H444 224 aaKnown RBP6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 PRDM11Q9NQV5 511 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 C1GALT1Q9NS00 363 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 SMC4Q9NTJ3 1288 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 PIM2Q9P1W9 311 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 LTBP4Q8N2S1 1624 aa6.87□□□□□ -1.31
PPFIA1-221ENST00000532443 SYNGAP1Q96PV0 1343 aa6.86□□□□□ -1.31
PPFIA1-221ENST00000532443 FAM83GA6ND36 823 aa6.86□□□□□ -1.31
PPFIA1-221ENST00000532443 VAMP4O75379 141 aa6.86□□□□□ -1.31
PPFIA1-221ENST00000532443 DCTN1Q14203 1278 aa6.86□□□□□ -1.31
PPFIA1-221ENST00000532443 TAF7Q15545 349 aaPredicted RBP6.86□□□□□ -1.31
PPFIA1-221ENST00000532443 TWISTNBQ3B726 338 aaPredicted RBP6.86□□□□□ -1.31
PPFIA1-221ENST00000532443 ZNF530Q6P9A1 599 aaPredicted RBP6.86□□□□□ -1.31
PPFIA1-221ENST00000532443 SV2BQ7L1I2 683 aa6.86□□□□□ -1.31
PPFIA1-221ENST00000532443 MCM10Q7L590 875 aa6.86□□□□□ -1.31
PPFIA1-221ENST00000532443 USHBP1Q8N6Y0 703 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms