RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 AKT3Q9Y243 479 aa8.9□□□□□ -0.98
CTNND1-230ENST00000532245 PALM3A6NDB9 673 aaPredicted RBP8.9□□□□□ -0.98
CTNND1-230ENST00000532245 KIF5CO60282 957 aa8.9□□□□□ -0.98
CTNND1-230ENST00000532245 PTGS1P23219 599 aa8.9□□□□□ -0.98
CTNND1-230ENST00000532245 HOXD10P28358 340 aa8.9□□□□□ -0.98
CTNND1-230ENST00000532245 UBXN1Q04323 297 aa8.9□□□□□ -0.98
CTNND1-230ENST00000532245 UBE2SQ16763 222 aa8.9□□□□□ -0.98
CTNND1-230ENST00000532245 LRSAM1Q6UWE0 723 aa8.9□□□□□ -0.98
CTNND1-230ENST00000532245 RNF207Q6ZRF8 634 aa8.9□□□□□ -0.98
CTNND1-230ENST00000532245 ZBTB8OSQ8IWT0 167 aa8.9□□□□□ -0.98
CTNND1-230ENST00000532245 ZFP91Q96JP5 570 aaPredicted RBP8.9□□□□□ -0.98
CTNND1-230ENST00000532245 BLZF1Q9H2G9 400 aa8.9□□□□□ -0.98
CTNND1-230ENST00000532245 VWDEQ8N2E2 1590 aa8.9□□□□□ -0.98
CTNND1-230ENST00000532245 ZSCAN12O43309 604 aa8.9□□□□□ -0.98
CTNND1-230ENST00000532245 NMT2O60551 498 aa8.9□□□□□ -0.98
CTNND1-230ENST00000532245 CUTAO60888 179 aa8.9□□□□□ -0.98
CTNND1-230ENST00000532245 ZSCAN23Q3MJ62 389 aa8.9□□□□□ -0.98
CTNND1-230ENST00000532245 TNS2Q63HR2 1409 aa8.9□□□□□ -0.98
CTNND1-230ENST00000532245 RDH13Q8NBN7 331 aa8.9□□□□□ -0.98
CTNND1-230ENST00000532245 FAM193BQ96PV7 902 aaPredicted RBP8.9□□□□□ -0.98
CTNND1-230ENST00000532245 OSBPL3Q9H4L5 887 aa8.9□□□□□ -0.98
CTNND1-230ENST00000532245 LRRIQ4A6NIV6 560 aa8.9□□□□□ -0.99
CTNND1-230ENST00000532245 EXOC3O60645 756 aa8.9□□□□□ -0.99
CTNND1-230ENST00000532245 GPBP1Q86WP2 473 aa8.9□□□□□ -0.99
CTNND1-230ENST00000532245 PPP1R16BQ96T49 567 aa8.9□□□□□ -0.99
CTNND1-230ENST00000532245 APOL6Q9BWW8 343 aa8.9□□□□□ -0.99
CTNND1-230ENST00000532245 NT5C3AQ9H0P0 336 aa8.9□□□□□ -0.99
CTNND1-230ENST00000532245 CEP83Q9Y592 693 aa8.9□□□□□ -0.99
CTNND1-230ENST00000532245 C3P01024 1663 aa8.9□□□□□ -0.99
CTNND1-230ENST00000532245 CALUO43852 315 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-230ENST00000532245 MYL3P08590 195 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 SCRN1Q12765 414 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 PTF1AQ7RTS3 328 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 CPVLQ9H3G5 476 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 CENPHQ9H3R5 247 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 RRAGCQ9HB90 399 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 TRMT1Q9NXH9 659 aaKnown RBP8.89□□□□□ -0.99
CTNND1-230ENST00000532245 PLSCR1O15162 318 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 OR52Z1P0C646 297 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 SEPT7Q16181 437 aaKnown RBP8.89□□□□□ -0.99
CTNND1-230ENST00000532245 RSPH3Q86UC2 560 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 SESTD1Q86VW0 696 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 NEK11Q8NG66 645 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 FAM160A1Q05DH4 1040 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 MTMR2Q13614 643 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 KLHL40Q2TBA0 621 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 IQCEQ6IPM2 695 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 GALNT17Q6IS24 598 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 RAET1EQ8TD07 263 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 CEP95Q96GE4 821 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.89□□□□□ -0.994e-9■□□□□ 9.9
CTNND1-230ENST00000532245 FASTKD5Q7L8L6 764 aaKnown RBP8.89□□□□□ -0.99
CTNND1-230ENST00000532245 ERCC4Q92889 916 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-230ENST00000532245 GTPBP4Q9BZE4 634 aaKnown RBP8.89□□□□□ -0.99
CTNND1-230ENST00000532245 CEMIPQ8WUJ3 1361 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 TMEM110-MUSTN1A8MSY1 372 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 TNPO2O14787 897 aaKnown RBP8.89□□□□□ -0.99
CTNND1-230ENST00000532245 CSF1RP07333 972 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 SLC8A3P57103 927 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 ZNF827Q17R98 1081 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 ANO3Q9BYT9 981 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 TMEM39BQ9GZU3 492 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 SUGT1Q9Y2Z0 365 aa8.89□□□□□ -0.99
CTNND1-230ENST00000532245 DEPDC5O75140 1603 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 SH2B2O14492 632 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-230ENST00000532245 NR1I2O75469 434 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 ADCY5O95622 1261 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 SRGNP10124 158 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 MARK3P27448 753 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 RABL6Q3YEC7 729 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-230ENST00000532245 CTR9Q6PD62 1173 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 NSUN4Q96CB9 384 aaKnown RBP8.88□□□□□ -0.99
CTNND1-230ENST00000532245 CCDC97Q96F63 343 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-230ENST00000532245 DEFB129Q9H1M3 183 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 WDR70Q9NW82 654 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 KDM3AQ9Y4C1 1321 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 PPLO60437 1756 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 DDNO94850 711 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-230ENST00000532245 KLRK1P26718 216 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 EPHX2P34913 555 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 CDC42EP5Q6NZY7 148 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 MIS18BP1Q6P0N0 1132 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 PROCA1Q8NCQ7 364 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-230ENST00000532245 TRERF1Q96PN7 1200 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 ALS2CR12Q96Q35 445 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 ADPGKQ9BRR6 497 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 PCDHA4Q9UN74 947 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 REREQ9P2R6 1566 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 CETN3O15182 167 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 TNNI1P19237 187 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 LIG4P49917 911 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 MYSM1Q5VVJ2 828 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 ABI1Q8IZP0 508 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 NACA2Q9H009 215 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 RPAP3Q9H6T3 665 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-230ENST00000532245 POLLQ9UGP5 575 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 FEM1BQ9UK73 627 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 RPS12P25398 132 aaKnown RBP8.88□□□□□ -0.99
CTNND1-230ENST00000532245 CCDC112Q8NEF3 446 aa8.88□□□□□ -0.99
CTNND1-230ENST00000532245 TBCKQ8TEA7 893 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms