RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 TSPY3P0CV98 308 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 TSPY8P0CW00 308 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 TSPY1Q01534 308 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 MPP2Q14168 576 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 E2F5Q15329 346 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 DDB1Q16531 1140 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 RGL3Q3MIN7 710 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 SLC6A19Q695T7 634 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 ITPRIPL1Q6GPH6 555 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 B3GNT9Q6UX72 402 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 CYP26C1Q6V0L0 522 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 TPTE2Q6XPS3 522 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 LRRC69Q6ZNQ3 347 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 GPR155Q7Z3F1 870 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 NBPF5PQ86XG9 351 aaPredicted RBP6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 TEX9Q8N6V9 391 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 GATAD2BQ8WXI9 593 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 VMP1Q96GC9 406 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 EPN3Q9H201 632 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 NMRK2Q9NPI5 230 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 GIMAP2Q9UG22 337 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 SEPT9Q9UHD8 586 aaPredicted RBP6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 TRAK1Q9UPV9 953 aa6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 TNPO3Q9Y5L0 923 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-222ENST00000531967 TRBV23-1A0A0A0MS06 115 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 ANKRD18BA2A2Z9 1011 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 RRN3P2A6NIE6 340 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 DXOO77932 396 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 ZNF460Q14592 562 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 TERF2Q15554 542 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 SLC45A4Q5BKX6 768 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 C4orf48Q5BLP8 95 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 YOD1Q5VVQ6 348 aaPredicted RBP6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 TTBK2Q6IQ55 1244 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 C3orf67Q6ZVT6 689 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 DAAM2Q86T65 1068 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 BPHLQ86WA6 291 aaPredicted RBP6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 ANKRD18AQ8IVF6 992 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 TRMT44Q8IYL2 757 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 CMTR2Q8IYT2 770 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 DEPTORQ8TB45 409 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 CFAP53Q96M91 514 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 NUP88Q99567 741 aaPredicted RBP6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 PLEKHA5Q9HAU0 1116 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 TRIM39Q9HCM9 518 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 SEL1LQ9UBV2 794 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 LRCH1Q9Y2L9 728 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 A0A0G2JS52 829 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 K7ESF4 209 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 AGERQ15109 404 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 CCNG2Q16589 344 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 PRR16Q569H4 304 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 ANKRD45Q5TZF3 282 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 RTL10Q7L3V2 364 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 RASGRP2Q7LDG7 609 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 SAMD7Q7Z3H4 446 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 REC114Q7Z4M0 266 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 SLC35G2Q8TBE7 412 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 UBXN10Q96LJ8 280 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 ARHGEF4Q9NR80 690 aa6.1□□□□□ -1.43
ECHDC1-222ENST00000531967 FAM221AA4D161 298 aa6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 EREGO14944 169 aa6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 CTNND1O60716 968 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 HSPA6P17066 643 aa6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 XPAP23025 273 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 TNNT2P45379 298 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 AP3B2Q13367 1082 aa6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 ODF1Q14990 250 aa6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 NCAPHQ15003 741 aa6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 PTPN14Q15678 1187 aa6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 IQSEC1Q6DN90 963 aa6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 PDE12Q6L8Q7 609 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 TMCO3Q6UWJ1 677 aa6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 WAPLQ7Z5K2 1190 aa6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 ARHGEF25Q86VW2 580 aa6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 IPO9Q96P70 1041 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 LMAN2LQ9H0V9 348 aa6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 EHD4Q9H223 541 aa6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 ATP8A2Q9NTI2 1148 aa6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 DACH1Q9UI36 760 aa6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 PARP3Q9Y6F1 533 aa6.09□□□□□ -1.43
ECHDC1-222ENST00000531967 CPLX1O14810 134 aa6.09□□□□□ -1.44
ECHDC1-222ENST00000531967 IL6STP40189 918 aaPredicted RBP6.09□□□□□ -1.44
ECHDC1-222ENST00000531967 BTKQ06187 659 aa6.09□□□□□ -1.44
ECHDC1-222ENST00000531967 CDCA2Q69YH5 1023 aaPredicted RBP6.09□□□□□ -1.44
ECHDC1-222ENST00000531967 VHLLQ6RSH7 139 aa6.09□□□□□ -1.44
ECHDC1-222ENST00000531967 CCDC73Q6ZRK6 1079 aa6.09□□□□□ -1.44
ECHDC1-222ENST00000531967 FOXJ1Q92949 421 aa6.09□□□□□ -1.44
ECHDC1-222ENST00000531967 TAAR9Q96RI9 348 aa6.09□□□□□ -1.44
ECHDC1-222ENST00000531967 CHRDQ9H2X0 955 aa6.09□□□□□ -1.44
ECHDC1-222ENST00000531967 STAP2Q9UGK3 403 aa6.09□□□□□ -1.44
ECHDC1-222ENST00000531967 PPP1R9AQ9ULJ8 1098 aa6.09□□□□□ -1.44
ECHDC1-222ENST00000531967 GPRASP1Q5JY77 1395 aa6.08□□□□□ -1.44
ECHDC1-222ENST00000531967 M0R2C6 588 aa6.08□□□□□ -1.44
ECHDC1-222ENST00000531967 ERVH48-1M5A8F1 160 aa6.08□□□□□ -1.44
ECHDC1-222ENST00000531967 IL33O95760 270 aa6.08□□□□□ -1.44
ECHDC1-222ENST00000531967 MTHFD1P11586 935 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-222ENST00000531967 ERVK-21P61565 698 aa6.08□□□□□ -1.44
ECHDC1-222ENST00000531967 PKN2Q16513 984 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-222ENST00000531967 MILR1Q7Z6M3 343 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms