RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 PRDM1O75626 825 aa15.85■□□□□ 0.13
AMBRA1-210ENST00000531542 ZNF865P0CJ78 1059 aaPredicted RBP15.85■□□□□ 0.13
AMBRA1-210ENST00000531542 TSPY3P0CV98 308 aa15.85■□□□□ 0.13
AMBRA1-210ENST00000531542 TSPY8P0CW00 308 aa15.85■□□□□ 0.13
AMBRA1-210ENST00000531542 RARBP10826 455 aa15.85■□□□□ 0.13
AMBRA1-210ENST00000531542 RTP1P59025 263 aa15.85■□□□□ 0.13
AMBRA1-210ENST00000531542 SNRNP48Q6IEG0 339 aaKnown RBP15.85■□□□□ 0.13
AMBRA1-210ENST00000531542 SAMD1Q6SPF0 538 aaPredicted RBP15.85■□□□□ 0.13
AMBRA1-210ENST00000531542 EVI5LQ96CN4 794 aa15.85■□□□□ 0.13
AMBRA1-210ENST00000531542 LRCH3Q96II8 777 aa15.85■□□□□ 0.13
AMBRA1-210ENST00000531542 GMCL1Q96IK5 515 aa15.85■□□□□ 0.13
AMBRA1-210ENST00000531542 FBXO40Q9UH90 709 aa15.85■□□□□ 0.13
AMBRA1-210ENST00000531542 ANAPC4Q9UJX5 808 aa15.85■□□□□ 0.13
AMBRA1-210ENST00000531542 PHF24Q9UPV7 400 aa15.85■□□□□ 0.13
AMBRA1-210ENST00000531542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.85■□□□□ 0.13
AMBRA1-210ENST00000531542 SYNGAP1Q96PV0 1343 aa15.85■□□□□ 0.13
AMBRA1-210ENST00000531542 FRMPD3Q5JV73 1810 aa15.84■□□□□ 0.13
AMBRA1-210ENST00000531542 FOXP2O15409 715 aa15.84■□□□□ 0.13
AMBRA1-210ENST00000531542 AKR1A1P14550 325 aa15.84■□□□□ 0.13
AMBRA1-210ENST00000531542 NOVP48745 357 aa15.84■□□□□ 0.13
AMBRA1-210ENST00000531542 ATN1P54259 1190 aaPredicted RBP15.84■□□□□ 0.13
AMBRA1-210ENST00000531542 TFAP4Q01664 338 aa15.84■□□□□ 0.13
AMBRA1-210ENST00000531542 ALX1Q15699 326 aa15.84■□□□□ 0.13
AMBRA1-210ENST00000531542 FAM47AQ5JRC9 791 aa15.84■□□□□ 0.13
AMBRA1-210ENST00000531542 RNF180Q86T96 592 aa15.84■□□□□ 0.13
AMBRA1-210ENST00000531542 STK11IPQ8N1F8 1099 aa15.84■□□□□ 0.13
AMBRA1-210ENST00000531542 CHST13Q8NET6 341 aa15.84■□□□□ 0.13
AMBRA1-210ENST00000531542 LBHD1Q9BQE6 289 aaPredicted RBP15.84■□□□□ 0.13
AMBRA1-210ENST00000531542 ZBTB47Q9UFB7 747 aaPredicted RBP15.84■□□□□ 0.13
AMBRA1-210ENST00000531542 PRKAG2Q9UGJ0 569 aa15.84■□□□□ 0.13
AMBRA1-210ENST00000531542 CNPY2Q9Y2B0 182 aa15.84■□□□□ 0.13
AMBRA1-210ENST00000531542 RIPK3Q9Y572 518 aa15.84■□□□□ 0.13
AMBRA1-210ENST00000531542 DNAH12Q6ZR08 3092 aa15.83■□□□□ 0.13
AMBRA1-210ENST00000531542 FGRP09769 529 aa15.83■□□□□ 0.12
AMBRA1-210ENST00000531542 BMP3P12645 472 aa15.83■□□□□ 0.12
AMBRA1-210ENST00000531542 ADCYAP1R1P41586 468 aa15.83■□□□□ 0.12
AMBRA1-210ENST00000531542 ANKRD45Q5TZF3 282 aa15.83■□□□□ 0.12
AMBRA1-210ENST00000531542 CHURC1Q8WUH1 139 aa15.83■□□□□ 0.12
AMBRA1-210ENST00000531542 DDX11Q96FC9 970 aa15.83■□□□□ 0.12
AMBRA1-210ENST00000531542 TSEN34Q9BSV6 310 aaKnown RBP15.83■□□□□ 0.12
AMBRA1-210ENST00000531542 XPNPEP3Q9NQH7 507 aa15.83■□□□□ 0.12
AMBRA1-210ENST00000531542 HELLSQ9NRZ9 838 aa15.83■□□□□ 0.12
AMBRA1-210ENST00000531542 TAL1P17542 331 aaPredicted RBP15.82■□□□□ 0.12
AMBRA1-210ENST00000531542 STAT2P52630 851 aa15.82■□□□□ 0.12
AMBRA1-210ENST00000531542 PDE1AP54750 535 aa15.82■□□□□ 0.12
AMBRA1-210ENST00000531542 MDM2Q00987 491 aaPredicted RBP15.82■□□□□ 0.12
AMBRA1-210ENST00000531542 ANO1Q5XXA6 986 aa15.82■□□□□ 0.12
AMBRA1-210ENST00000531542 SLFN13Q68D06 897 aa15.82■□□□□ 0.12
AMBRA1-210ENST00000531542 FAM160B2Q86V87 743 aa15.82■□□□□ 0.12
AMBRA1-210ENST00000531542 KIFC2Q96AC6 838 aa15.82■□□□□ 0.12
AMBRA1-210ENST00000531542 CTDP1Q9Y5B0 961 aaPredicted RBP15.82■□□□□ 0.12
AMBRA1-210ENST00000531542 ORC4O43929 436 aa15.81■□□□□ 0.12
AMBRA1-210ENST00000531542 ADAMTS4O75173 837 aa15.81■□□□□ 0.12
AMBRA1-210ENST00000531542 SNAI1O95863 264 aaPredicted RBP15.81■□□□□ 0.12
AMBRA1-210ENST00000531542 FAM109BQ6ICB4 259 aaPredicted RBP15.81■□□□□ 0.12
AMBRA1-210ENST00000531542 CPXCR1Q8N123 301 aa15.81■□□□□ 0.12
AMBRA1-210ENST00000531542 LRRC47Q8N1G4 583 aaKnown RBP15.81■□□□□ 0.12
AMBRA1-210ENST00000531542 STAG1Q8WVM7 1258 aa15.81■□□□□ 0.12
AMBRA1-210ENST00000531542 CRBNQ96SW2 442 aa15.81■□□□□ 0.12
AMBRA1-210ENST00000531542 RAVER2Q9HCJ3 691 aaKnown RBP15.81■□□□□ 0.12
AMBRA1-210ENST00000531542 FAM184BQ9ULE4 1060 aa15.81■□□□□ 0.12
AMBRA1-210ENST00000531542 ATP11BQ9Y2G3 1177 aa15.81■□□□□ 0.12
AMBRA1-210ENST00000531542 COL11A1P12107 1806 aaPredicted RBP15.8■□□□□ 0.12
AMBRA1-210ENST00000531542 ZMYM6O95789 1325 aa15.8■□□□□ 0.12
AMBRA1-210ENST00000531542 TMEM232C9JQI7 657 aa15.8■□□□□ 0.12
AMBRA1-210ENST00000531542 SLC1A4P43007 532 aa15.8■□□□□ 0.12
AMBRA1-210ENST00000531542 TKFCQ3LXA3 575 aa15.8■□□□□ 0.12
AMBRA1-210ENST00000531542 ABHD16BQ9H3Z7 469 aa15.8■□□□□ 0.12
AMBRA1-210ENST00000531542 IL17RBQ9NRM6 502 aa15.8■□□□□ 0.12
AMBRA1-210ENST00000531542 MOXD2PA6NHM9 499 aa15.79■□□□□ 0.12
AMBRA1-210ENST00000531542 TSPY2A6NKD2 308 aa15.79■□□□□ 0.12
AMBRA1-210ENST00000531542 DUSP11O75319 330 aaKnown RBP15.79■□□□□ 0.12
AMBRA1-210ENST00000531542 CST5P28325 142 aaPredicted RBP15.79■□□□□ 0.12
AMBRA1-210ENST00000531542 NKX3-2P78367 333 aa15.79■□□□□ 0.12
AMBRA1-210ENST00000531542 TRIM60Q495X7 471 aa15.79■□□□□ 0.12
AMBRA1-210ENST00000531542 CCSAPQ6IQ19 270 aaPredicted RBP15.79■□□□□ 0.12
AMBRA1-210ENST00000531542 RCSD1Q6JBY9 416 aa15.79■□□□□ 0.12
AMBRA1-210ENST00000531542 ANKRD35Q8N283 1001 aa15.79■□□□□ 0.12
AMBRA1-210ENST00000531542 DEFB123Q8N688 67 aa15.79■□□□□ 0.12
AMBRA1-210ENST00000531542 KLHDC9Q8NEP7 349 aa15.79■□□□□ 0.12
AMBRA1-210ENST00000531542 TOX2Q96NM4 488 aa15.79■□□□□ 0.12
AMBRA1-210ENST00000531542 PDLIM7Q9NR12 457 aa15.79■□□□□ 0.12
AMBRA1-210ENST00000531542 TACC3Q9Y6A5 838 aa15.79■□□□□ 0.12
AMBRA1-210ENST00000531542 ZNFX1Q9P2E3 1918 aaKnown RBP15.78■□□□□ 0.12
AMBRA1-210ENST00000531542 ZNF536O15090 1300 aa15.78■□□□□ 0.12
AMBRA1-210ENST00000531542 POTEB2H3BUK9 544 aa15.78■□□□□ 0.12
AMBRA1-210ENST00000531542 PGK1P00558 417 aa15.78■□□□□ 0.12
AMBRA1-210ENST00000531542 PCP11498 1178 aaKnown RBP15.78■□□□□ 0.12
AMBRA1-210ENST00000531542 ACVR2BQ13705 512 aa15.78■□□□□ 0.12
AMBRA1-210ENST00000531542 MCMDC2Q4G0Z9 681 aa15.78■□□□□ 0.12
AMBRA1-210ENST00000531542 VPS53Q5VIR6 699 aa15.78■□□□□ 0.12
AMBRA1-210ENST00000531542 CCDC129Q6ZRS4 1044 aa15.78■□□□□ 0.12
AMBRA1-210ENST00000531542 ANKRD33Q7Z3H0 272 aa15.78■□□□□ 0.12
AMBRA1-210ENST00000531542 SMC5Q8IY18 1101 aa15.78■□□□□ 0.12
AMBRA1-210ENST00000531542 FAM133AQ8N9E0 248 aa15.78■□□□□ 0.12
AMBRA1-210ENST00000531542 NUP133Q8WUM0 1156 aa15.78■□□□□ 0.12
AMBRA1-210ENST00000531542 FERMT2Q96AC1 680 aa15.78■□□□□ 0.12
AMBRA1-210ENST00000531542 FGD4Q96M96 766 aa15.78■□□□□ 0.12
AMBRA1-210ENST00000531542 ACAD9Q9H845 621 aa15.78■□□□□ 0.12
AMBRA1-210ENST00000531542 TCP11L1Q9NUJ3 509 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms