RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 KIFC2Q96AC6 838 aa22.08■■□□□ 1.12
SMPD1-205ENST00000531303 C12orf42Q96LP6 360 aa22.08■■□□□ 1.12
SMPD1-205ENST00000531303 SPZ1Q9BXG8 430 aa22.08■■□□□ 1.12
SMPD1-205ENST00000531303 TREML2Q5T2D2 321 aa22.07■■□□□ 1.12
SMPD1-205ENST00000531303 RASAL3Q86YV0 1011 aa22.07■■□□□ 1.12
SMPD1-205ENST00000531303 CHURC1Q8WUH1 139 aa22.07■■□□□ 1.12
SMPD1-205ENST00000531303 FEM1BQ9UK73 627 aa22.07■■□□□ 1.12
SMPD1-205ENST00000531303 PRPF3O43395 683 aaKnown RBP22.06■■□□□ 1.12
SMPD1-205ENST00000531303 FLOT1O75955 427 aa22.06■■□□□ 1.12
SMPD1-205ENST00000531303 GRM1Q13255 1194 aa22.06■■□□□ 1.12
SMPD1-205ENST00000531303 RRP36Q96EU6 259 aaKnown RBP22.06■■□□□ 1.12
SMPD1-205ENST00000531303 AIFM3Q96NN9 605 aa22.06■■□□□ 1.12
SMPD1-205ENST00000531303 PIGSQ96S52 555 aa22.06■■□□□ 1.12
SMPD1-205ENST00000531303 RNF26Q9BY78 433 aaPredicted RBP22.06■■□□□ 1.12
SMPD1-205ENST00000531303 RIOX1Q9H6W3 641 aa22.06■■□□□ 1.12
SMPD1-205ENST00000531303 JMJD4Q9H9V9 463 aa22.06■■□□□ 1.12
SMPD1-205ENST00000531303 PRR12Q9ULL5 1215 aa22.06■■□□□ 1.12
SMPD1-205ENST00000531303 GTF2A2P52657 109 aa22.05■■□□□ 1.12
SMPD1-205ENST00000531303 BTNL9Q6UXG8 535 aa22.05■■□□□ 1.12
SMPD1-205ENST00000531303 SLF1Q9BQI6 1058 aa22.05■■□□□ 1.12
SMPD1-205ENST00000531303 LOC285556D6RIA3 1793 aa22.05■■□□□ 1.12
SMPD1-205ENST00000531303 ZBTB48P10074 688 aaPredicted RBP22.04■■□□□ 1.12
SMPD1-205ENST00000531303 SMARCA1P28370 1054 aa22.04■■□□□ 1.12
SMPD1-205ENST00000531303 FASTKD5Q7L8L6 764 aaKnown RBP22.04■■□□□ 1.12
SMPD1-205ENST00000531303 FAM160B2Q86V87 743 aa22.04■■□□□ 1.12
SMPD1-205ENST00000531303 PROCA1Q8NCQ7 364 aaPredicted RBP22.04■■□□□ 1.12
SMPD1-205ENST00000531303 ALG1Q9BT22 464 aa22.04■■□□□ 1.12
SMPD1-205ENST00000531303 CWC22Q9HCG8 908 aaKnown RBP22.04■■□□□ 1.12
SMPD1-205ENST00000531303 STK36Q9NRP7 1315 aa22.04■■□□□ 1.12
SMPD1-205ENST00000531303 SEC63Q9UGP8 760 aaKnown RBP22.04■■□□□ 1.12
SMPD1-205ENST00000531303 CCL15-CCL14A0A0B4J2E2 113 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 USP17L15C9J2P7 530 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 USP17L13C9JLJ4 530 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 USP17L11C9JVI0 530 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 USP17L18D6R9N7 530 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 USP17L22D6RA61 530 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 USP17L17D6RBQ6 530 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 USP17L19D6RCP7 530 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 USP17L20D6RJB6 530 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 DEXIO95424 95 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 CETPP11597 493 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 APLP1P51693 650 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 USP17L24Q0WX57 530 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 PKN1Q16512 942 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 CCL15Q16663 113 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 CATSPERGQ6ZRH7 1159 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 MS4A4AQ96JQ5 239 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 MOGSQ13724 837 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 CDC37Q16543 378 aaPredicted RBP22.03■■□□□ 1.12
SMPD1-205ENST00000531303 LARP1BQ659C4 914 aaKnown RBP22.03■■□□□ 1.12
SMPD1-205ENST00000531303 GPKOWQ92917 476 aaPredicted RBP eCLIP22.03■■□□□ 1.12
SMPD1-205ENST00000531303 GJB4Q9NTQ9 266 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 KIF3AQ9Y496 699 aa22.03■■□□□ 1.12
SMPD1-205ENST00000531303 PLA2G6O60733 806 aa22.02■■□□□ 1.12
SMPD1-205ENST00000531303 SLC10A3P09131 477 aa22.02■■□□□ 1.12
SMPD1-205ENST00000531303 GUCY1B3Q02153 619 aa22.02■■□□□ 1.12
SMPD1-205ENST00000531303 PFKFB3Q16875 520 aaPredicted RBP22.02■■□□□ 1.12
SMPD1-205ENST00000531303 CCDC174Q6PII3 467 aa22.02■■□□□ 1.12
SMPD1-205ENST00000531303 HEATR3Q7Z4Q2 680 aa22.02■■□□□ 1.12
SMPD1-205ENST00000531303 PRPF38AQ8NAV1 312 aaKnown RBP22.02■■□□□ 1.12
SMPD1-205ENST00000531303 BRI3BPQ8WY22 251 aa22.02■■□□□ 1.12
SMPD1-205ENST00000531303 WASF1Q92558 559 aa22.02■■□□□ 1.12
SMPD1-205ENST00000531303 AGTPBP1Q9UPW5 1226 aa22.02■■□□□ 1.12
SMPD1-205ENST00000531303 PARP14Q460N5 1801 aa22.01■■□□□ 1.11
SMPD1-205ENST00000531303 SCG2P13521 617 aa22.01■■□□□ 1.11
SMPD1-205ENST00000531303 COG2Q14746 738 aa22.01■■□□□ 1.11
SMPD1-205ENST00000531303 QRICH1Q2TAL8 776 aa22.01■■□□□ 1.11
SMPD1-205ENST00000531303 OTUD7BQ6GQQ9 843 aa22.01■■□□□ 1.11
SMPD1-205ENST00000531303 GPAT2Q6NUI2 795 aa22.01■■□□□ 1.11
SMPD1-205ENST00000531303 CCDC102AQ96A19 550 aa22.01■■□□□ 1.11
SMPD1-205ENST00000531303 ATG4CQ96DT6 458 aa22.01■■□□□ 1.11
SMPD1-205ENST00000531303 RBM27Q9P2N5 1060 aaKnown RBP22.01■■□□□ 1.11
SMPD1-205ENST00000531303 PPP1R9AQ9ULJ8 1098 aa22.01■■□□□ 1.11
SMPD1-205ENST00000531303 PNMA6FA0A0J9YX94 578 aa22■■□□□ 1.11
SMPD1-205ENST00000531303 ZBTB5O15062 677 aa22■■□□□ 1.11
SMPD1-205ENST00000531303 IRX3P78415 501 aaPredicted RBP22■■□□□ 1.11
SMPD1-205ENST00000531303 CYP4F22Q6NT55 531 aa22■■□□□ 1.11
SMPD1-205ENST00000531303 C8orf76Q96K31 380 aa22■■□□□ 1.11
SMPD1-205ENST00000531303 CREBZFQ9NS37 354 aa22■■□□□ 1.11
SMPD1-205ENST00000531303 VPS54Q9P1Q0 977 aa22■■□□□ 1.11
SMPD1-205ENST00000531303 CTDP1Q9Y5B0 961 aaPredicted RBP22■■□□□ 1.11
SMPD1-205ENST00000531303 RLFQ13129 1914 aa22■■□□□ 1.11
SMPD1-205ENST00000531303 BTBD19C9JJ37 291 aa21.99■■□□□ 1.11
SMPD1-205ENST00000531303 TAL1P17542 331 aaPredicted RBP21.99■■□□□ 1.11
SMPD1-205ENST00000531303 SYT1P21579 422 aa21.99■■□□□ 1.11
SMPD1-205ENST00000531303 FOXD4L5Q5VV16 416 aaPredicted RBP21.99■■□□□ 1.11
SMPD1-205ENST00000531303 WWC2Q6AWC2 1192 aa21.99■■□□□ 1.11
SMPD1-205ENST00000531303 FOXD4L4Q8WXT5 416 aaPredicted RBP21.99■■□□□ 1.11
SMPD1-205ENST00000531303 MTMR8Q96EF0 704 aa21.99■■□□□ 1.11
SMPD1-205ENST00000531303 SMCHD1A6NHR9 2005 aa21.99■■□□□ 1.11
SMPD1-205ENST00000531303 VPS37CA5D8V6 355 aaPredicted RBP21.98■■□□□ 1.11
SMPD1-205ENST00000531303 FAM155AB1AL88 458 aaPredicted RBP21.98■■□□□ 1.11
SMPD1-205ENST00000531303 H3BQV1 296 aa21.98■■□□□ 1.11
SMPD1-205ENST00000531303 PPP1R11O60927 126 aaPredicted RBP21.98■■□□□ 1.11
SMPD1-205ENST00000531303 PDCP20941 246 aa21.98■■□□□ 1.11
SMPD1-205ENST00000531303 HOXA7P31268 230 aaPredicted RBP21.98■■□□□ 1.11
SMPD1-205ENST00000531303 DSG3P32926 999 aa21.98■■□□□ 1.11
SMPD1-205ENST00000531303 TRIM29Q14134 588 aa21.98■■□□□ 1.11
SMPD1-205ENST00000531303 DEFB115Q30KQ5 88 aa21.98■■□□□ 1.11
SMPD1-205ENST00000531303 IFFO2Q5TF58 517 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms