RNA–Protein interactions for RNA: ENST00000531188.5

RPS3-217, Transcript of ribosomal protein S3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3, Length 2,097 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-217ENST00000531188 TSPY26PQ9H489 355 aa13.97□□□□□ -0.17
RPS3-217ENST00000531188 ATAD5Q96QE3 1844 aa13.96□□□□□ -0.17
RPS3-217ENST00000531188 SRCAPQ6ZRS2 3230 aa13.96□□□□□ -0.17
RPS3-217ENST00000531188 STXBP3O00186 592 aa13.96□□□□□ -0.17
RPS3-217ENST00000531188 LETM1O95202 739 aaPredicted RBP13.96□□□□□ -0.17
RPS3-217ENST00000531188 GH2P01242 217 aa13.96□□□□□ -0.17
RPS3-217ENST00000531188 PTMAP06454 111 aaKnown RBP13.96□□□□□ -0.17
RPS3-217ENST00000531188 ZNF280AP59817 542 aaPredicted RBP13.96□□□□□ -0.17
RPS3-217ENST00000531188 ZNF543Q08ER8 600 aa13.96□□□□□ -0.17
RPS3-217ENST00000531188 ASPRV1Q53RT3 343 aa13.96□□□□□ -0.17
RPS3-217ENST00000531188 RILPL1Q5EBL4 403 aa13.96□□□□□ -0.17
RPS3-217ENST00000531188 SAMD7Q7Z3H4 446 aa13.96□□□□□ -0.17
RPS3-217ENST00000531188 CLIC6Q96NY7 704 aa13.96□□□□□ -0.17
RPS3-217ENST00000531188 FHDC1Q9C0D6 1143 aaPredicted RBP13.96□□□□□ -0.17
RPS3-217ENST00000531188 CLSTN2Q9H4D0 955 aa13.96□□□□□ -0.17
RPS3-217ENST00000531188 RIOX1Q9H6W3 641 aa13.96□□□□□ -0.17
RPS3-217ENST00000531188 KANSL2Q9H9L4 492 aa13.96□□□□□ -0.17
RPS3-217ENST00000531188 SH3GLB2Q9NR46 395 aa13.96□□□□□ -0.17
RPS3-217ENST00000531188 DDX19AQ9NUU7 478 aaKnown RBP13.96□□□□□ -0.17
RPS3-217ENST00000531188 ZNF541Q9H0D2 1346 aa13.96□□□□□ -0.17
RPS3-217ENST00000531188 POLR2AP24928 1970 aaKnown RBP13.96□□□□□ -0.18
RPS3-217ENST00000531188 A0A1W2PQ27 194 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 A0A1W2PQ64 194 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 A0A1W2PQD8 194 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 MYO1BO43795 1136 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 RAD21O60216 631 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 PPP6R2O75170 966 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 DMTNQ08495 405 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 FKBP1CQ5VVH2 108 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 TMEM179Q6ZVK1 233 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 KCTD1Q719H9 257 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 MICALL2Q8IY33 904 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 MRPS27Q92552 414 aaKnown RBP13.95□□□□□ -0.18
RPS3-217ENST00000531188 MKL1Q969V6 931 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 FUCA2Q9BTY2 467 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 TNMDQ9H2S6 317 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 BRMS1Q9HCU9 246 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 BARHL2Q9NY43 387 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 NYAP2Q9P242 653 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 PGAP2Q9UHJ9 254 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 MRVI1Q9Y6F6 885 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 ASTN2O75129 1339 aaPredicted RBP13.95□□□□□ -0.18
RPS3-217ENST00000531188 RPS12P25398 132 aaKnown RBP13.95□□□□□ -0.18
RPS3-217ENST00000531188 SMARCA1P28370 1054 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 SLC16A2P36021 539 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 NDUFA8P51970 172 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 ICA1Q05084 483 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 FAM160A1Q05DH4 1040 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 CCDC73Q6ZRK6 1079 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 ARHGAP27Q6ZUM4 889 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 MIGA2Q7L4E1 593 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 CKAP2LQ8IYA6 745 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 RASGRP4Q8TDF6 673 aa13.95□□□□□ -0.18
RPS3-217ENST00000531188 RRP36Q96EU6 259 aaKnown RBP13.95□□□□□ -0.18
RPS3-217ENST00000531188 HERC5Q9UII4 1024 aaKnown RBP13.95□□□□□ -0.18
RPS3-217ENST00000531188 CNOT7Q9UIV1 285 aaKnown RBP13.95□□□□□ -0.18
RPS3-217ENST00000531188 GRIN1Q05586 938 aa13.94□□□□□ -0.18
RPS3-217ENST00000531188 CCDC96Q2M329 555 aa13.94□□□□□ -0.18
RPS3-217ENST00000531188 TBC1D10BQ4KMP7 808 aaPredicted RBP13.94□□□□□ -0.18
RPS3-217ENST00000531188 PIK3AP1Q6ZUJ8 805 aa13.94□□□□□ -0.18
RPS3-217ENST00000531188 FAM83AQ86UY5 434 aa13.94□□□□□ -0.18
RPS3-217ENST00000531188 BLIDQ8IZY5 108 aa13.94□□□□□ -0.18
RPS3-217ENST00000531188 FMR1NBQ8N0W7 255 aaPredicted RBP13.94□□□□□ -0.18
RPS3-217ENST00000531188 RNF214Q8ND24 703 aa13.94□□□□□ -0.18
RPS3-217ENST00000531188 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.94□□□□□ -0.18
RPS3-217ENST00000531188 PCDHA4Q9UN74 947 aa13.94□□□□□ -0.18
RPS3-217ENST00000531188 M0R2N6 131 aa13.94□□□□□ -0.18
RPS3-217ENST00000531188 MAP3K11Q16584 847 aa13.94□□□□□ -0.18
RPS3-217ENST00000531188 SHC4Q6S5L8 630 aa13.94□□□□□ -0.18
RPS3-217ENST00000531188 ADGRF4Q8IZF3 695 aa13.94□□□□□ -0.18
RPS3-217ENST00000531188 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.94□□□□□ -0.18
RPS3-217ENST00000531188 SMCHD1A6NHR9 2005 aa13.93□□□□□ -0.18
RPS3-217ENST00000531188 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.93□□□□□ -0.18
RPS3-217ENST00000531188 A0A1W2PRG0 241 aa13.93□□□□□ -0.18
RPS3-217ENST00000531188 CMA1P23946 247 aa13.93□□□□□ -0.18
RPS3-217ENST00000531188 CALML3P27482 149 aa13.93□□□□□ -0.18
RPS3-217ENST00000531188 RASA3Q14644 834 aa13.93□□□□□ -0.18
RPS3-217ENST00000531188 SLFN13Q68D06 897 aa13.93□□□□□ -0.18
RPS3-217ENST00000531188 DPF2Q92785 391 aa13.93□□□□□ -0.18
RPS3-217ENST00000531188 GTPBP4Q9BZE4 634 aaKnown RBP13.93□□□□□ -0.18
RPS3-217ENST00000531188 JMJD4Q9H9V9 463 aa13.93□□□□□ -0.18
RPS3-217ENST00000531188 SEC63Q9UGP8 760 aaKnown RBP13.93□□□□□ -0.18
RPS3-217ENST00000531188 TRIM75PA6NK02 468 aa13.92□□□□□ -0.18
RPS3-217ENST00000531188 PFKFB1P16118 471 aa13.92□□□□□ -0.18
RPS3-217ENST00000531188 NAPAP54920 295 aa13.92□□□□□ -0.18
RPS3-217ENST00000531188 ZNF174Q15697 407 aa13.92□□□□□ -0.18
RPS3-217ENST00000531188 SPECC1Q5M775 1068 aa13.92□□□□□ -0.18
RPS3-217ENST00000531188 PPP4R3BQ5MIZ7 849 aa13.92□□□□□ -0.18
RPS3-217ENST00000531188 RBM43Q6ZSC3 357 aaKnown RBP13.92□□□□□ -0.18
RPS3-217ENST00000531188 JMYQ8N9B5 988 aa13.92□□□□□ -0.18
RPS3-217ENST00000531188 COA7Q96BR5 231 aa13.92□□□□□ -0.18
RPS3-217ENST00000531188 NUP88Q99567 741 aaPredicted RBP13.92□□□□□ -0.18
RPS3-217ENST00000531188 FBXO2Q9UK22 296 aaPredicted RBP13.92□□□□□ -0.18
RPS3-217ENST00000531188 PCDHA6Q9UN73 950 aa13.92□□□□□ -0.18
RPS3-217ENST00000531188 PCDHA8Q9Y5H6 950 aa13.92□□□□□ -0.18
RPS3-217ENST00000531188 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.92□□□□□ -0.18
RPS3-217ENST00000531188 USP17L10C9JJH3 530 aa13.92□□□□□ -0.18
RPS3-217ENST00000531188 F5H6K3 240 aa13.92□□□□□ -0.18
RPS3-217ENST00000531188 CUTAO60888 179 aa13.92□□□□□ -0.18
RPS3-217ENST00000531188 KLRC3Q07444 240 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms