RNA–Protein interactions for RNA: ENST00000530917.5

UBASH3B-207, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 5

Gene UBASH3B, Length 987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-207ENST00000530917 PCDH10Q9P2E7 1040 aa13.89□□□□□ -0.19
UBASH3B-207ENST00000530917 SMCHD1A6NHR9 2005 aa13.89□□□□□ -0.19
UBASH3B-207ENST00000530917 RLFQ13129 1914 aa13.88□□□□□ -0.19
UBASH3B-207ENST00000530917 VPS37CA5D8V6 355 aaPredicted RBP13.88□□□□□ -0.19
UBASH3B-207ENST00000530917 WDR46O15213 610 aaKnown RBP13.88□□□□□ -0.19
UBASH3B-207ENST00000530917 XBP1P17861 261 aa13.88□□□□□ -0.19
UBASH3B-207ENST00000530917 MTMR2Q13614 643 aa13.88□□□□□ -0.19
UBASH3B-207ENST00000530917 TRIM29Q14134 588 aa13.88□□□□□ -0.19
UBASH3B-207ENST00000530917 ZYXQ15942 572 aaKnown RBP13.88□□□□□ -0.19
UBASH3B-207ENST00000530917 SH3D19Q5HYK7 790 aa13.88□□□□□ -0.19
UBASH3B-207ENST00000530917 FAM177A1Q8N128 213 aaPredicted RBP13.88□□□□□ -0.19
UBASH3B-207ENST00000530917 C2orf69Q8N8R5 385 aa13.88□□□□□ -0.19
UBASH3B-207ENST00000530917 NUP88Q99567 741 aaPredicted RBP13.88□□□□□ -0.19
UBASH3B-207ENST00000530917 JMJD4Q9H9V9 463 aa13.88□□□□□ -0.19
UBASH3B-207ENST00000530917 GBA2Q9HCG7 927 aaPredicted RBP13.88□□□□□ -0.19
UBASH3B-207ENST00000530917 FEM1BQ9UK73 627 aa13.88□□□□□ -0.19
UBASH3B-207ENST00000530917 hCG_1642624A0A1W2PR95 340 aa13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 SPDYE5A6NIY4 337 aa13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 TRIM75PA6NK02 468 aa13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 TMEM232C9JQI7 657 aa13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 CELF2O95319 508 aaKnown RBP13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 SLC16A2P36021 539 aa13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 FAM83BQ5T0W9 1011 aa13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 SYDE2Q5VT97 1194 aa13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 KRT40Q6A162 431 aa13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 FAM160B2Q86V87 743 aa13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 TNPO1Q92973 898 aaKnown RBP13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 SLC10A4Q96EP9 437 aa13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 CLMNQ96JQ2 1002 aa13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 PIGSQ96S52 555 aa13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 ZNF408Q9H9D4 720 aa13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 ELP3Q9H9T3 547 aa13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 SH3GLB2Q9NR46 395 aa13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 SEC63Q9UGP8 760 aaKnown RBP13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 ISY1Q9ULR0 285 aaKnown RBP13.87□□□□□ -0.19
UBASH3B-207ENST00000530917 LOC285556D6RIA3 1793 aa13.86□□□□□ -0.19
UBASH3B-207ENST00000530917 PNMA6FA0A0J9YX94 578 aa13.86□□□□□ -0.19
UBASH3B-207ENST00000530917 CXCL11O14625 94 aa13.86□□□□□ -0.19
UBASH3B-207ENST00000530917 F13A1P00488 732 aa13.86□□□□□ -0.19
UBASH3B-207ENST00000530917 STAT2P52630 851 aa13.86□□□□□ -0.19
UBASH3B-207ENST00000530917 FOSBP53539 338 aa13.86□□□□□ -0.19
UBASH3B-207ENST00000530917 GUCY1B3Q02153 619 aa13.86□□□□□ -0.19
UBASH3B-207ENST00000530917 PPIL2Q13356 520 aa13.86□□□□□ -0.19
UBASH3B-207ENST00000530917 OTUD7BQ6GQQ9 843 aa13.86□□□□□ -0.19
UBASH3B-207ENST00000530917 PIBF1Q8WXW3 757 aa13.86□□□□□ -0.19
UBASH3B-207ENST00000530917 ZSCAN16Q9H4T2 348 aaPredicted RBP13.86□□□□□ -0.19
UBASH3B-207ENST00000530917 GJB4Q9NTQ9 266 aa13.86□□□□□ -0.19
UBASH3B-207ENST00000530917 TMOD4Q9NZQ9 345 aa13.86□□□□□ -0.19
UBASH3B-207ENST00000530917 COL11A1P12107 1806 aaPredicted RBP13.85□□□□□ -0.19
UBASH3B-207ENST00000530917 hCG_1984214I3L0E3 225 aa13.85□□□□□ -0.19
UBASH3B-207ENST00000530917 ZBTB5O15062 677 aa13.85□□□□□ -0.19
UBASH3B-207ENST00000530917 VCAM1P19320 739 aa13.85□□□□□ -0.19
UBASH3B-207ENST00000530917 HMGCS2P54868 508 aa13.85□□□□□ -0.19
UBASH3B-207ENST00000530917 IKQ13123 557 aaPredicted RBP13.85□□□□□ -0.19
UBASH3B-207ENST00000530917 FOXD4L5Q5VV16 416 aaPredicted RBP13.85□□□□□ -0.19
UBASH3B-207ENST00000530917 CST9Q5W186 159 aa13.85□□□□□ -0.19
UBASH3B-207ENST00000530917 CLEC17AQ6ZS10 378 aa13.85□□□□□ -0.19
UBASH3B-207ENST00000530917 ZNF713Q8N859 430 aaPredicted RBP13.85□□□□□ -0.19
UBASH3B-207ENST00000530917 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
UBASH3B-207ENST00000530917 FOXD4L4Q8WXT5 416 aaPredicted RBP13.85□□□□□ -0.19
UBASH3B-207ENST00000530917 BARHL2Q9NY43 387 aa13.85□□□□□ -0.19
UBASH3B-207ENST00000530917 VPS54Q9P1Q0 977 aa13.85□□□□□ -0.19
UBASH3B-207ENST00000530917 PRR12Q9ULL5 1215 aa13.85□□□□□ -0.19
UBASH3B-207ENST00000530917 KCNH4Q9UQ05 1017 aa13.85□□□□□ -0.19
UBASH3B-207ENST00000530917 ATP6V1DQ9Y5K8 247 aa13.85□□□□□ -0.19
UBASH3B-207ENST00000530917 A0A0G2JLL6 359 aaPredicted RBP13.84□□□□□ -0.19
UBASH3B-207ENST00000530917 STXBP3O00186 592 aa13.84□□□□□ -0.19
UBASH3B-207ENST00000530917 IRF6O14896 467 aa13.84□□□□□ -0.19
UBASH3B-207ENST00000530917 MMP1P03956 469 aa13.84□□□□□ -0.19
UBASH3B-207ENST00000530917 RESTQ13127 1097 aa13.84□□□□□ -0.19
UBASH3B-207ENST00000530917 SAFBQ15424 915 aaKnown RBP eCLIP13.84□□□□□ -0.19
UBASH3B-207ENST00000530917 WWC2Q6AWC2 1192 aa13.84□□□□□ -0.19
UBASH3B-207ENST00000530917 PRRT2Q7Z6L0 340 aaPredicted RBP13.84□□□□□ -0.19
UBASH3B-207ENST00000530917 HOMER1Q86YM7 354 aa13.84□□□□□ -0.19
UBASH3B-207ENST00000530917 PRPF38AQ8NAV1 312 aaKnown RBP13.84□□□□□ -0.19
UBASH3B-207ENST00000530917 SMC1BQ8NDV3 1235 aa13.84□□□□□ -0.19
UBASH3B-207ENST00000530917 CCDC12Q8WUD4 166 aaPredicted RBP13.84□□□□□ -0.19
UBASH3B-207ENST00000530917 OPTNQ96CV9 577 aa13.84□□□□□ -0.19
UBASH3B-207ENST00000530917 SHISA4Q96DD7 197 aa13.84□□□□□ -0.19
UBASH3B-207ENST00000530917 OTUD5Q96G74 571 aa13.84□□□□□ -0.19
UBASH3B-207ENST00000530917 PHF20Q9BVI0 1012 aa13.84□□□□□ -0.19
UBASH3B-207ENST00000530917 RPAP3Q9H6T3 665 aaPredicted RBP13.84□□□□□ -0.19
UBASH3B-207ENST00000530917 KCNJ14Q9UNX9 436 aa13.84□□□□□ -0.19
UBASH3B-207ENST00000530917 U2AF2P26368 475 aaKnown RBP eCLIP13.83□□□□□ -0.2
UBASH3B-207ENST00000530917 CALML3P27482 149 aa13.83□□□□□ -0.2
UBASH3B-207ENST00000530917 DGKZQ13574 1117 aa13.83□□□□□ -0.2
UBASH3B-207ENST00000530917 CDC37Q16543 378 aaPredicted RBP13.83□□□□□ -0.2
UBASH3B-207ENST00000530917 QRICH1Q2TAL8 776 aa13.83□□□□□ -0.2
UBASH3B-207ENST00000530917 MCTP1Q6DN14 999 aa13.83□□□□□ -0.2
UBASH3B-207ENST00000530917 GALNT17Q6IS24 598 aa13.83□□□□□ -0.2
UBASH3B-207ENST00000530917 HEATR3Q7Z4Q2 680 aa13.83□□□□□ -0.2
UBASH3B-207ENST00000530917 FERMT3Q86UX7 667 aa13.83□□□□□ -0.2
UBASH3B-207ENST00000530917 PROCA1Q8NCQ7 364 aaPredicted RBP13.83□□□□□ -0.2
UBASH3B-207ENST00000530917 CCDC148Q8NFR7 591 aa13.83□□□□□ -0.2
UBASH3B-207ENST00000530917 GPKOWQ92917 476 aaPredicted RBP eCLIP13.83□□□□□ -0.2
UBASH3B-207ENST00000530917 SLF1Q9BQI6 1058 aa13.83□□□□□ -0.2
UBASH3B-207ENST00000530917 RANBP17Q9H2T7 1088 aaKnown RBP13.83□□□□□ -0.2
UBASH3B-207ENST00000530917 FOXP1Q9H334 677 aaPredicted RBP13.83□□□□□ -0.2
UBASH3B-207ENST00000530917 FBXO28Q9NVF7 368 aa13.83□□□□□ -0.2
UBASH3B-207ENST00000530917 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms