RNA–Protein interactions for RNA: ENST00000530565.5

CTSF-208, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-208ENST00000530565 ANKS1AQ92625 1134 aa10.06□□□□□ -0.8
CTSF-208ENST00000530565 JAKMIP1Q96N16 626 aaKnown RBP10.06□□□□□ -0.8
CTSF-208ENST00000530565 MTA3Q9BTC8 594 aa10.06□□□□□ -0.8
CTSF-208ENST00000530565 RPAP3Q9H6T3 665 aaPredicted RBP10.06□□□□□ -0.8
CTSF-208ENST00000530565 PNMA3Q9UL41 463 aa10.06□□□□□ -0.8
CTSF-208ENST00000530565 DNAH12Q6ZR08 3092 aa10.06□□□□□ -0.8
CTSF-208ENST00000530565 VCANP13611 3396 aa10.06□□□□□ -0.8
CTSF-208ENST00000530565 ERICH2A1L162 156 aa10.05□□□□□ -0.8
CTSF-208ENST00000530565 USP17L15C9J2P7 530 aa10.05□□□□□ -0.8
CTSF-208ENST00000530565 USP17L13C9JLJ4 530 aa10.05□□□□□ -0.8
CTSF-208ENST00000530565 USP17L11C9JVI0 530 aa10.05□□□□□ -0.8
CTSF-208ENST00000530565 USP17L18D6R9N7 530 aa10.05□□□□□ -0.8
CTSF-208ENST00000530565 USP17L22D6RA61 530 aa10.05□□□□□ -0.8
CTSF-208ENST00000530565 USP17L17D6RBQ6 530 aa10.05□□□□□ -0.8
CTSF-208ENST00000530565 USP17L19D6RCP7 530 aa10.05□□□□□ -0.8
CTSF-208ENST00000530565 USP17L20D6RJB6 530 aa10.05□□□□□ -0.8
CTSF-208ENST00000530565 IFIT3O14879 490 aaKnown RBP10.05□□□□□ -0.8
CTSF-208ENST00000530565 HMGB1P09429 215 aaKnown RBP10.05□□□□□ -0.8
CTSF-208ENST00000530565 USP17L24Q0WX57 530 aa10.05□□□□□ -0.8
CTSF-208ENST00000530565 WTAPQ15007 396 aa10.05□□□□□ -0.8
CTSF-208ENST00000530565 TMEM67Q5HYA8 995 aa10.05□□□□□ -0.8
CTSF-208ENST00000530565 IFIT1BQ5T764 474 aaKnown RBP10.05□□□□□ -0.8
CTSF-208ENST00000530565 SLFN13Q68D06 897 aa10.05□□□□□ -0.8
CTSF-208ENST00000530565 CATSPERGQ6ZRH7 1159 aa10.05□□□□□ -0.8
CTSF-208ENST00000530565 DHX32Q7L7V1 743 aaKnown RBP10.05□□□□□ -0.8
CTSF-208ENST00000530565 TMEM87BQ96K49 555 aa10.05□□□□□ -0.8
CTSF-208ENST00000530565 TANGO6Q9C0B7 1094 aa10.05□□□□□ -0.8
CTSF-208ENST00000530565 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.05□□□□□ -0.8
CTSF-208ENST00000530565 ASCC2Q9H1I8 757 aaPredicted RBP10.05□□□□□ -0.8
CTSF-208ENST00000530565 KAT14Q9H8E8 782 aa10.05□□□□□ -0.8
CTSF-208ENST00000530565 WDR19Q8NEZ3 1342 aa10.05□□□□□ -0.8
CTSF-208ENST00000530565 CUL9Q8IWT3 2517 aa10.04□□□□□ -0.8
CTSF-208ENST00000530565 CPA1P15085 419 aa10.04□□□□□ -0.8
CTSF-208ENST00000530565 PSMA5P28066 241 aa10.04□□□□□ -0.8
CTSF-208ENST00000530565 ANAPC15P60006 121 aa10.04□□□□□ -0.8
CTSF-208ENST00000530565 IRX3P78415 501 aaPredicted RBP10.04□□□□□ -0.8
CTSF-208ENST00000530565 EXOSC10Q01780 885 aaKnown RBP10.04□□□□□ -0.8
CTSF-208ENST00000530565 TRIM32Q13049 653 aa10.04□□□□□ -0.8
CTSF-208ENST00000530565 LRIT3Q3SXY7 679 aa10.04□□□□□ -0.8
CTSF-208ENST00000530565 FAM83BQ5T0W9 1011 aa10.04□□□□□ -0.8
CTSF-208ENST00000530565 BLOC1S2Q6QNY1 142 aa10.04□□□□□ -0.8
CTSF-208ENST00000530565 Q7L0L9 218 aa10.04□□□□□ -0.8
CTSF-208ENST00000530565 NECAB2Q7Z6G3 386 aa10.04□□□□□ -0.8
CTSF-208ENST00000530565 ANKLE1Q8NAG6 615 aa10.04□□□□□ -0.8
CTSF-208ENST00000530565 PNMA1Q8ND90 353 aa10.04□□□□□ -0.8
CTSF-208ENST00000530565 IL27Q8NEV9 243 aa10.04□□□□□ -0.8
CTSF-208ENST00000530565 IGDCC4Q8TDY8 1250 aa10.04□□□□□ -0.8
CTSF-208ENST00000530565 DCAF4Q8WV16 495 aa10.04□□□□□ -0.8
CTSF-208ENST00000530565 GMCL1Q96IK5 515 aa10.04□□□□□ -0.8
CTSF-208ENST00000530565 NUP88Q99567 741 aaPredicted RBP10.04□□□□□ -0.8
CTSF-208ENST00000530565 GJD2Q9UKL4 321 aa10.04□□□□□ -0.8
CTSF-208ENST00000530565 MTMR7Q9Y216 660 aa10.04□□□□□ -0.8
CTSF-208ENST00000530565 PARP14Q460N5 1801 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 SH2B2O14492 632 aaPredicted RBP10.03□□□□□ -0.8
CTSF-208ENST00000530565 PDHBP11177 359 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 BMP3P12645 472 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 CASTP20810 708 aaKnown RBP10.03□□□□□ -0.8
CTSF-208ENST00000530565 SLC1A4P43007 532 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 HERVK_113P62684 666 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 COG2Q14746 738 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 FAM110CQ1W6H9 321 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 RASGRP2Q7LDG7 609 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 C7orf61Q8IZ16 206 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 DEFB123Q8N688 67 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 ANKRD13CQ8N6S4 541 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 SMCR8Q8TEV9 937 aaPredicted RBP10.03□□□□□ -0.8
CTSF-208ENST00000530565 CHMP4CQ96CF2 233 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 IL17RAQ96F46 866 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 TCEANC2Q96MN5 208 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 P2RX7Q99572 595 aaKnown RBP10.03□□□□□ -0.8
CTSF-208ENST00000530565 LRRC2Q9BYS8 371 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 C22orf23Q9BZE7 217 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 TM6SF1Q9BZW5 370 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 LY9Q9HBG7 655 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 SENP2Q9HC62 589 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 ZSWIM6Q9HCJ5 1215 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 GPHNQ9NQX3 736 aaPredicted RBP10.03□□□□□ -0.8
CTSF-208ENST00000530565 ZMYND8Q9ULU4 1186 aaPredicted RBP10.03□□□□□ -0.8
CTSF-208ENST00000530565 STXBP5LQ9Y2K9 1186 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 RLFQ13129 1914 aa10.03□□□□□ -0.8
CTSF-208ENST00000530565 FLOT1O75955 427 aa10.02□□□□□ -0.81
CTSF-208ENST00000530565 SNHG28P0DPA3 235 aa10.02□□□□□ -0.81
CTSF-208ENST00000530565 RPS6KB1P23443 525 aa10.02□□□□□ -0.81
CTSF-208ENST00000530565 LIFRP42702 1097 aa10.02□□□□□ -0.81
CTSF-208ENST00000530565 GCLCP48506 637 aaPredicted RBP10.02□□□□□ -0.81
CTSF-208ENST00000530565 RBM25P49756 843 aaKnown RBP10.02□□□□□ -0.81
CTSF-208ENST00000530565 CCDC96Q2M329 555 aa10.02□□□□□ -0.81
CTSF-208ENST00000530565 KCTD1Q719H9 257 aa10.02□□□□□ -0.81
CTSF-208ENST00000530565 RUFY3Q7L099 469 aa10.02□□□□□ -0.81
CTSF-208ENST00000530565 TMTC2Q8N394 836 aa10.02□□□□□ -0.81
CTSF-208ENST00000530565 GTF3C2Q8WUA4 911 aaPredicted RBP10.02□□□□□ -0.81
CTSF-208ENST00000530565 COA7Q96BR5 231 aa10.02□□□□□ -0.81
CTSF-208ENST00000530565 TBC1D32Q96NH3 1257 aa10.02□□□□□ -0.81
CTSF-208ENST00000530565 FBXO28Q9NVF7 368 aa10.02□□□□□ -0.81
CTSF-208ENST00000530565 MTMR10Q9NXD2 777 aa10.02□□□□□ -0.81
CTSF-208ENST00000530565 HOXC10Q9NYD6 342 aa10.02□□□□□ -0.81
CTSF-208ENST00000530565 FEM1BQ9UK73 627 aa10.02□□□□□ -0.81
CTSF-208ENST00000530565 ISY1Q9ULR0 285 aaKnown RBP10.02□□□□□ -0.81
CTSF-208ENST00000530565 CYP46A1Q9Y6A2 500 aa10.02□□□□□ -0.81
CTSF-208ENST00000530565 FRMPD3Q5JV73 1810 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms