RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 MKNK2Q9HBH9 465 aa17.88■□□□□ 0.45
CAPN1-219ENST00000530495 ECHDC1Q9NTX5 307 aa17.88■□□□□ 0.45
CAPN1-219ENST00000530495 RIPK3Q9Y572 518 aa17.88■□□□□ 0.45
CAPN1-219ENST00000530495 CUL9Q8IWT3 2517 aa17.88■□□□□ 0.45
CAPN1-219ENST00000530495 UNC80Q8N2C7 3258 aa17.87■□□□□ 0.45
CAPN1-219ENST00000530495 ATP2A1O14983 1001 aa17.87■□□□□ 0.45
CAPN1-219ENST00000530495 SMARCA5O60264 1052 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-219ENST00000530495 SNAI1O95863 264 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-219ENST00000530495 SNRNP48Q6IEG0 339 aaKnown RBP17.87■□□□□ 0.45
CAPN1-219ENST00000530495 ANKRD33Q7Z3H0 272 aa17.87■□□□□ 0.45
CAPN1-219ENST00000530495 DDX11Q96FC9 970 aa17.87■□□□□ 0.45
CAPN1-219ENST00000530495 TOX2Q96NM4 488 aa17.87■□□□□ 0.45
CAPN1-219ENST00000530495 FAM184BQ9ULE4 1060 aa17.87■□□□□ 0.45
CAPN1-219ENST00000530495 SYNGAP1Q96PV0 1343 aa17.87■□□□□ 0.45
CAPN1-219ENST00000530495 MINDY4BA8MYZ0 360 aa17.86■□□□□ 0.45
CAPN1-219ENST00000530495 NDUFB10O96000 172 aa17.86■□□□□ 0.45
CAPN1-219ENST00000530495 ACLYP53396 1101 aa17.86■□□□□ 0.45
CAPN1-219ENST00000530495 EPHB4P54760 987 aa17.86■□□□□ 0.45
CAPN1-219ENST00000530495 DIEXFQ68CQ4 756 aaKnown RBP17.86■□□□□ 0.45
CAPN1-219ENST00000530495 ZNF467Q7Z7K2 595 aaPredicted RBP17.86■□□□□ 0.45
CAPN1-219ENST00000530495 KBTBD3Q8NAB2 608 aa17.86■□□□□ 0.45
CAPN1-219ENST00000530495 KLHDC9Q8NEP7 349 aa17.86■□□□□ 0.45
CAPN1-219ENST00000530495 NUP133Q8WUM0 1156 aa17.86■□□□□ 0.45
CAPN1-219ENST00000530495 OSBP2Q969R2 916 aa17.86■□□□□ 0.45
CAPN1-219ENST00000530495 MKL1Q969V6 931 aa17.86■□□□□ 0.45
CAPN1-219ENST00000530495 TTYH1Q9H313 450 aaPredicted RBP17.86■□□□□ 0.45
CAPN1-219ENST00000530495 IGKV6D-41A0A0C4DH26 115 aa17.85■□□□□ 0.45
CAPN1-219ENST00000530495 PQBP1O60828 265 aaKnown RBP17.85■□□□□ 0.45
CAPN1-219ENST00000530495 RAG1P15918 1043 aa17.85■□□□□ 0.45
CAPN1-219ENST00000530495 FAAP100Q0VG06 881 aa17.85■□□□□ 0.45
CAPN1-219ENST00000530495 CCSAPQ6IQ19 270 aaPredicted RBP17.85■□□□□ 0.45
CAPN1-219ENST00000530495 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.85■□□□□ 0.45
CAPN1-219ENST00000530495 STK11IPQ8N1F8 1099 aa17.85■□□□□ 0.45
CAPN1-219ENST00000530495 APPBP2Q92624 585 aa17.85■□□□□ 0.45
CAPN1-219ENST00000530495 LENG1Q96BZ8 264 aaPredicted RBP17.85■□□□□ 0.45
CAPN1-219ENST00000530495 TMEM39AQ9NV64 488 aa17.85■□□□□ 0.45
CAPN1-219ENST00000530495 CLIP2Q9UDT6 1046 aa17.85■□□□□ 0.45
CAPN1-219ENST00000530495 RCAN3Q9UKA8 241 aa17.85■□□□□ 0.45
CAPN1-219ENST00000530495 MYH4Q9Y623 1939 aa17.85■□□□□ 0.45
CAPN1-219ENST00000530495 SYNRGQ9UMZ2 1314 aa17.84■□□□□ 0.45
CAPN1-219ENST00000530495 MOXD2PA6NHM9 499 aa17.84■□□□□ 0.45
CAPN1-219ENST00000530495 RNF113AO15541 343 aaKnown RBP17.84■□□□□ 0.45
CAPN1-219ENST00000530495 ZBED4O75132 1171 aa17.84■□□□□ 0.45
CAPN1-219ENST00000530495 DUSP11O75319 330 aaKnown RBP17.84■□□□□ 0.45
CAPN1-219ENST00000530495 KCNA10Q16322 511 aa17.84■□□□□ 0.45
CAPN1-219ENST00000530495 ZNF287Q9HBT7 754 aa17.84■□□□□ 0.45
CAPN1-219ENST00000530495 STARD7Q9NQZ5 370 aa17.84■□□□□ 0.45
CAPN1-219ENST00000530495 SYNPO2Q9UMS6 1093 aa17.84■□□□□ 0.45
CAPN1-219ENST00000530495 DCDC2CA8MYV0 355 aa17.83■□□□□ 0.44
CAPN1-219ENST00000530495 ZFYP08048 801 aaPredicted RBP17.83■□□□□ 0.44
CAPN1-219ENST00000530495 GNAT2P19087 354 aa17.83■□□□□ 0.44
CAPN1-219ENST00000530495 FPGSQ05932 587 aa17.83■□□□□ 0.44
CAPN1-219ENST00000530495 ACVR2BQ13705 512 aa17.83■□□□□ 0.44
CAPN1-219ENST00000530495 C20orf194Q5TEA3 1177 aa17.83■□□□□ 0.44
CAPN1-219ENST00000530495 ZNF444Q8N0Y2 327 aaPredicted RBP17.83■□□□□ 0.44
CAPN1-219ENST00000530495 CPXCR1Q8N123 301 aa17.83■□□□□ 0.44
CAPN1-219ENST00000530495 MAFAQ8NHW3 353 aaPredicted RBP17.83■□□□□ 0.44
CAPN1-219ENST00000530495 RNPC3Q96LT9 517 aaKnown RBP17.83■□□□□ 0.44
CAPN1-219ENST00000530495 SLC38A10Q9HBR0 1119 aa17.83■□□□□ 0.44
CAPN1-219ENST00000530495 MTMR4Q9NYA4 1195 aa17.83■□□□□ 0.44
CAPN1-219ENST00000530495 FEM1BQ9UK73 627 aa17.83■□□□□ 0.44
CAPN1-219ENST00000530495 ELP1O95163 1332 aa17.82■□□□□ 0.44
CAPN1-219ENST00000530495 TMEM265A0A087WTH1 108 aa17.82■□□□□ 0.44
CAPN1-219ENST00000530495 CST5P28325 142 aaPredicted RBP17.82■□□□□ 0.44
CAPN1-219ENST00000530495 SLC4A3P48751 1232 aa17.82■□□□□ 0.44
CAPN1-219ENST00000530495 OAZ1P54368 228 aa17.82■□□□□ 0.44
CAPN1-219ENST00000530495 GMCL1P1Q8NEA9 526 aa17.82■□□□□ 0.44
CAPN1-219ENST00000530495 MYLIPQ8WY64 445 aa17.82■□□□□ 0.44
CAPN1-219ENST00000530495 KIFC2Q96AC6 838 aa17.82■□□□□ 0.44
CAPN1-219ENST00000530495 CEP95Q96GE4 821 aa17.82■□□□□ 0.44
CAPN1-219ENST00000530495 ABHD16BQ9H3Z7 469 aa17.82■□□□□ 0.44
CAPN1-219ENST00000530495 DCTPP1Q9H773 170 aa17.82■□□□□ 0.44
CAPN1-219ENST00000530495 RAVER2Q9HCJ3 691 aaKnown RBP17.82■□□□□ 0.44
CAPN1-219ENST00000530495 ZHX1Q9UKY1 873 aaPredicted RBP17.82■□□□□ 0.44
CAPN1-219ENST00000530495 PATL2C9JE40 543 aaKnown RBP17.81■□□□□ 0.44
CAPN1-219ENST00000530495 GPAA1O43292 621 aa17.81■□□□□ 0.44
CAPN1-219ENST00000530495 TTLL1O95922 423 aa17.81■□□□□ 0.44
CAPN1-219ENST00000530495 TIMP1P01033 207 aa17.81■□□□□ 0.44
CAPN1-219ENST00000530495 CDK7P50613 346 aa17.81■□□□□ 0.44
CAPN1-219ENST00000530495 ANKRD35Q8N283 1001 aa17.81■□□□□ 0.44
CAPN1-219ENST00000530495 PCSK9Q8NBP7 692 aaKnown RBP17.81■□□□□ 0.44
CAPN1-219ENST00000530495 CHST13Q8NET6 341 aa17.81■□□□□ 0.44
CAPN1-219ENST00000530495 GPATCH3Q96I76 525 aa17.81■□□□□ 0.44
CAPN1-219ENST00000530495 FGD4Q96M96 766 aa17.81■□□□□ 0.44
CAPN1-219ENST00000530495 EPB41L4AQ9HCS5 686 aaPredicted RBP17.81■□□□□ 0.44
CAPN1-219ENST00000530495 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.81■□□□□ 0.44
CAPN1-219ENST00000530495 FBXO40Q9UH90 709 aa17.81■□□□□ 0.44
CAPN1-219ENST00000530495 CTDP1Q9Y5B0 961 aaPredicted RBP17.81■□□□□ 0.44
CAPN1-219ENST00000530495 MCM3APO60318 1980 aa17.8■□□□□ 0.44
CAPN1-219ENST00000530495 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.8■□□□□ 0.44
CAPN1-219ENST00000530495 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.8■□□□□ 0.44
CAPN1-219ENST00000530495 MYADML2A6NDP7 307 aa17.8■□□□□ 0.44
CAPN1-219ENST00000530495 PRDM1O75626 825 aa17.8■□□□□ 0.44
CAPN1-219ENST00000530495 APPP05067 770 aa17.8■□□□□ 0.44
CAPN1-219ENST00000530495 FDX1P10109 184 aa17.8■□□□□ 0.44
CAPN1-219ENST00000530495 TDO2P48775 406 aa17.8■□□□□ 0.44
CAPN1-219ENST00000530495 CCDC144BQ3MJ40 725 aa17.8■□□□□ 0.44
CAPN1-219ENST00000530495 IFNL3Q8IZI9 196 aa17.8■□□□□ 0.44
CAPN1-219ENST00000530495 GLT1D1Q96MS3 346 aa17.8■□□□□ 0.44
CAPN1-219ENST00000530495 UPF3AQ9H1J1 476 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms