RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 SLC10A5Q5PT55 438 aa21.94■■□□□ 1.1
PCF11-203ENST00000530304 STAG2Q8N3U4 1231 aa21.94■■□□□ 1.1
PCF11-203ENST00000530304 SH3GLB2Q9NR46 395 aa21.94■■□□□ 1.1
PCF11-203ENST00000530304 IL17RBQ9NRM6 502 aa21.94■■□□□ 1.1
PCF11-203ENST00000530304 JAG2Q9Y219 1238 aa21.94■■□□□ 1.1
PCF11-203ENST00000530304 H7C1D1 291 aa21.93■■□□□ 1.1
PCF11-203ENST00000530304 ARHGAP25P42331 645 aa21.93■■□□□ 1.1
PCF11-203ENST00000530304 TFAP4Q01664 338 aa21.93■■□□□ 1.1
PCF11-203ENST00000530304 WWC2Q6AWC2 1192 aa21.93■■□□□ 1.1
PCF11-203ENST00000530304 IRF2BP1Q8IU81 584 aa21.93■■□□□ 1.1
PCF11-203ENST00000530304 TRIM49BA6NDI0 452 aa21.93■■□□□ 1.1
PCF11-203ENST00000530304 TBC1D9BQ66K14 1250 aa21.93■■□□□ 1.1
PCF11-203ENST00000530304 SMARCC1Q92922 1105 aaPredicted RBP21.93■■□□□ 1.1
PCF11-203ENST00000530304 KIAA1551Q9HCM1 1747 aa21.93■■□□□ 1.1
PCF11-203ENST00000530304 NAALADL2Q58DX5 795 aa21.93■■□□□ 1.1
PCF11-203ENST00000530304 TYW1BQ6NUM6 668 aa21.93■■□□□ 1.1
PCF11-203ENST00000530304 DTHD1Q6ZMT9 781 aa21.93■■□□□ 1.1
PCF11-203ENST00000530304 ADSSL1Q8N142 457 aa21.93■■□□□ 1.1
PCF11-203ENST00000530304 LINC00116Q8NCU8 138 aa21.93■■□□□ 1.1
PCF11-203ENST00000530304 PNMA1Q8ND90 353 aa21.93■■□□□ 1.1
PCF11-203ENST00000530304 NAPGQ99747 312 aaPredicted RBP21.93■■□□□ 1.1
PCF11-203ENST00000530304 SLF1Q9BQI6 1058 aa21.93■■□□□ 1.1
PCF11-203ENST00000530304 TFRCP02786 760 aaKnown RBP21.92■■□□□ 1.1
PCF11-203ENST00000530304 PARP1P09874 1014 aaKnown RBP21.92■■□□□ 1.1
PCF11-203ENST00000530304 SMIM5Q71RC9 77 aa21.92■■□□□ 1.1
PCF11-203ENST00000530304 DGKHQ86XP1 1220 aa21.92■■□□□ 1.1
PCF11-203ENST00000530304 CHP1Q99653 195 aa21.92■■□□□ 1.1
PCF11-203ENST00000530304 M0R2N6 131 aa21.92■■□□□ 1.1
PCF11-203ENST00000530304 MYO1AQ9UBC5 1043 aa21.92■■□□□ 1.1
PCF11-203ENST00000530304 PP2D1A8MPX8 630 aa21.91■■□□□ 1.1
PCF11-203ENST00000530304 PMS1P54277 932 aaKnown RBP21.91■■□□□ 1.1
PCF11-203ENST00000530304 KCNQ4P56696 695 aa21.91■■□□□ 1.1
PCF11-203ENST00000530304 HNRNPLLQ8WVV9 542 aaKnown RBP21.91■■□□□ 1.1
PCF11-203ENST00000530304 PNKPQ96T60 521 aa21.91■■□□□ 1.1
PCF11-203ENST00000530304 CCDC194A0A1B0GVG4 234 aa21.91■■□□□ 1.1
PCF11-203ENST00000530304 MSANTD4Q8NCY6 345 aa21.91■■□□□ 1.1
PCF11-203ENST00000530304 RASSF8Q8NHQ8 419 aa21.91■■□□□ 1.1
PCF11-203ENST00000530304 ANKRD2Q9GZV1 360 aa21.91■■□□□ 1.1
PCF11-203ENST00000530304 TMEM60Q9H2L4 133 aa21.91■■□□□ 1.1
PCF11-203ENST00000530304 RAB21Q9UL25 225 aa21.91■■□□□ 1.1
PCF11-203ENST00000530304 COL5A3P25940 1745 aaPredicted RBP21.9■■□□□ 1.1
PCF11-203ENST00000530304 MAP2K7O14733 419 aa21.9■■□□□ 1.1
PCF11-203ENST00000530304 TUBB4BP68371 445 aa21.9■■□□□ 1.1
PCF11-203ENST00000530304 TXNRD3Q86VQ6 643 aa21.9■■□□□ 1.1
PCF11-203ENST00000530304 NLRP3Q96P20 1036 aa21.9■■□□□ 1.1
PCF11-203ENST00000530304 MAD2L2Q9UI95 211 aa21.9■■□□□ 1.1
PCF11-203ENST00000530304 PCDHA6Q9UN73 950 aa21.9■■□□□ 1.1
PCF11-203ENST00000530304 PCDHA8Q9Y5H6 950 aa21.9■■□□□ 1.1
PCF11-203ENST00000530304 TTC26A0AVF1 554 aa21.9■■□□□ 1.1
PCF11-203ENST00000530304 POTEB2H3BUK9 544 aa21.9■■□□□ 1.1
PCF11-203ENST00000530304 C12orf60Q5U649 245 aa21.9■■□□□ 1.1
PCF11-203ENST00000530304 DZIP1Q86YF9 867 aaKnown RBP21.9■■□□□ 1.1
PCF11-203ENST00000530304 MB21D1Q8N884 522 aa21.9■■□□□ 1.1
PCF11-203ENST00000530304 DYNLL2Q96FJ2 89 aa21.9■■□□□ 1.1
PCF11-203ENST00000530304 EPN1Q9Y6I3 576 aaPredicted RBP21.9■■□□□ 1.1
PCF11-203ENST00000530304 USP5P45974 858 aa21.89■■□□□ 1.09
PCF11-203ENST00000530304 ST5P78524 1137 aa21.89■■□□□ 1.09
PCF11-203ENST00000530304 KCNB1Q14721 858 aa21.89■■□□□ 1.09
PCF11-203ENST00000530304 BEND6Q5SZJ8 279 aaPredicted RBP21.89■■□□□ 1.09
PCF11-203ENST00000530304 ROBO1Q9Y6N7 1651 aa21.89■■□□□ 1.09
PCF11-203ENST00000530304 NDUFA10O95299 355 aa21.89■■□□□ 1.09
PCF11-203ENST00000530304 GRM4Q14833 912 aa21.89■■□□□ 1.09
PCF11-203ENST00000530304 ANKS1AQ92625 1134 aa21.89■■□□□ 1.09
PCF11-203ENST00000530304 PLIN2Q99541 437 aa21.89■■□□□ 1.09
PCF11-203ENST00000530304 MKRN1Q9UHC7 482 aaKnown RBP21.89■■□□□ 1.09
PCF11-203ENST00000530304 REXO2Q9Y3B8 237 aaKnown RBP21.89■■□□□ 1.09
PCF11-203ENST00000530304 KLRC4O43908 158 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 UBA7P41226 1012 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 PIP4K2BP78356 416 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 WHAMMP3Q1A5X7 153 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 INF2Q27J81 1249 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 CCDC88AQ3V6T2 1871 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 OR8K1Q8NGG5 319 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 CTAGE15A4D2H0 777 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 USP17L3A6NCW0 530 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 USP17L4A6NCW7 530 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 LGALS16A8MUM7 142 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 CTAGE8P0CG41 777 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 SLC35G1Q2M3R5 365 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 USP17L1Q7RTZ2 530 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 CTAGE6Q86UF2 777 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 CTAGE4Q8IX94 777 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 CCDC24Q8N4L8 307 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 ZNF507Q8TCN5 953 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 KBTBD4Q9NVX7 518 aa21.88■■□□□ 1.09
PCF11-203ENST00000530304 PES1O00541 588 aaKnown RBP21.87■■□□□ 1.09
PCF11-203ENST00000530304 CYTH3O43739 400 aa21.87■■□□□ 1.09
PCF11-203ENST00000530304 RHOXF2BP0C7M4 288 aa21.87■■□□□ 1.09
PCF11-203ENST00000530304 EEF1GP26641 437 aaKnown RBP21.87■■□□□ 1.09
PCF11-203ENST00000530304 GNAQP50148 359 aa21.87■■□□□ 1.09
PCF11-203ENST00000530304 RHOXF2Q9BQY4 288 aa21.87■■□□□ 1.09
PCF11-203ENST00000530304 MKNK2Q9HBH9 465 aa21.87■■□□□ 1.09
PCF11-203ENST00000530304 LUC7L2Q9Y383 392 aaKnown RBP21.87■■□□□ 1.09
PCF11-203ENST00000530304 A0A1W2PQC6 194 aa21.87■■□□□ 1.09
PCF11-203ENST00000530304 TMED8Q6PL24 325 aaPredicted RBP21.87■■□□□ 1.09
PCF11-203ENST00000530304 HEATR3Q7Z4Q2 680 aa21.87■■□□□ 1.09
PCF11-203ENST00000530304 CCSER1Q9C0I3 900 aa21.87■■□□□ 1.09
PCF11-203ENST00000530304 NYXQ9GZU5 481 aa21.87■■□□□ 1.09
PCF11-203ENST00000530304 THAP9Q9H5L6 903 aa21.87■■□□□ 1.09
PCF11-203ENST00000530304 CALCOCO1Q9P1Z2 691 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms