RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 KRT85P78386 507 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 DGKZQ13574 1117 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 GRM4Q14833 912 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 SRBD1Q8N5C6 995 aaKnown RBP16.64■□□□□ 0.25
TTC39A-216ENST00000530004 TMEM87AQ8NBN3 555 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 CCDC102AQ96A19 550 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 EMILIN3Q9NT22 766 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 DDX49Q9Y6V7 483 aaKnown RBP16.64■□□□□ 0.25
TTC39A-216ENST00000530004 PHIPQ8WWQ0 1821 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 CNTNAP5Q8WYK1 1306 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 A0A0G2JLL6 359 aaPredicted RBP16.64■□□□□ 0.25
TTC39A-216ENST00000530004 PRPF3O43395 683 aaKnown RBP16.64■□□□□ 0.25
TTC39A-216ENST00000530004 RAD21O60216 631 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 NDUFB10O96000 172 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 C1QTNF8P60827 252 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 MKRN3Q13064 507 aaKnown RBP16.64■□□□□ 0.25
TTC39A-216ENST00000530004 SNAPC2Q13487 334 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 DEFB115Q30KQ5 88 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 KIAA1755Q5JYT7 1200 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 KRT40Q6A162 431 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 USP17L2Q6R6M4 530 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 PRRT2Q7Z6L0 340 aaPredicted RBP16.64■□□□□ 0.25
TTC39A-216ENST00000530004 C12orf42Q96LP6 360 aa16.64■□□□□ 0.25
TTC39A-216ENST00000530004 FAM155AB1AL88 458 aaPredicted RBP16.63■□□□□ 0.25
TTC39A-216ENST00000530004 SNHG28P0DPA3 235 aa16.63■□□□□ 0.25
TTC39A-216ENST00000530004 PDHBP11177 359 aa16.63■□□□□ 0.25
TTC39A-216ENST00000530004 CSPP1Q1MSJ5 1256 aa16.63■□□□□ 0.25
TTC39A-216ENST00000530004 SLFN13Q68D06 897 aa16.63■□□□□ 0.25
TTC39A-216ENST00000530004 PAXIP1Q6ZW49 1069 aaPredicted RBP16.63■□□□□ 0.25
TTC39A-216ENST00000530004 RASGRP2Q7LDG7 609 aa16.63■□□□□ 0.25
TTC39A-216ENST00000530004 SPICE1Q8N0Z3 855 aa16.63■□□□□ 0.25
TTC39A-216ENST00000530004 LPAR1Q92633 364 aa16.63■□□□□ 0.25
TTC39A-216ENST00000530004 MS4A4AQ96JQ5 239 aa16.63■□□□□ 0.25
TTC39A-216ENST00000530004 MAD2L2Q9UI95 211 aa16.63■□□□□ 0.25
TTC39A-216ENST00000530004 V9GY48 417 aaPredicted RBP16.63■□□□□ 0.25
TTC39A-216ENST00000530004 GNAQP50148 359 aa16.62■□□□□ 0.25
TTC39A-216ENST00000530004 GTF2A2P52657 109 aa16.62■□□□□ 0.25
TTC39A-216ENST00000530004 CYP4F22Q6NT55 531 aa16.62■□□□□ 0.25
TTC39A-216ENST00000530004 STAG2Q8N3U4 1231 aa16.62■□□□□ 0.25
TTC39A-216ENST00000530004 GMCL1Q96IK5 515 aa16.62■□□□□ 0.25
TTC39A-216ENST00000530004 TMOD4Q9NZQ9 345 aa16.62■□□□□ 0.25
TTC39A-216ENST00000530004 hCG_1642624A0A1W2PR95 340 aa16.61■□□□□ 0.25
TTC39A-216ENST00000530004 VCAM1P19320 739 aa16.61■□□□□ 0.25
TTC39A-216ENST00000530004 SLC1A4P43007 532 aa16.61■□□□□ 0.25
TTC39A-216ENST00000530004 KIF23Q02241 960 aaPredicted RBP16.61■□□□□ 0.25
TTC39A-216ENST00000530004 PKN1Q16512 942 aa16.61■□□□□ 0.25
TTC39A-216ENST00000530004 KLHL40Q2TBA0 621 aa16.61■□□□□ 0.25
TTC39A-216ENST00000530004 TFIP11Q9UBB9 837 aaKnown RBP16.61■□□□□ 0.25
TTC39A-216ENST00000530004 PALM3A6NDB9 673 aaPredicted RBP16.61■□□□□ 0.25
TTC39A-216ENST00000530004 KIF28PB7ZC32 967 aa16.61■□□□□ 0.25
TTC39A-216ENST00000530004 GADD45BO75293 160 aaPredicted RBP16.61■□□□□ 0.25
TTC39A-216ENST00000530004 HTRA3P83110 453 aa16.61■□□□□ 0.25
TTC39A-216ENST00000530004 MOGSQ13724 837 aa16.61■□□□□ 0.25
TTC39A-216ENST00000530004 PROCA1Q8NCQ7 364 aaPredicted RBP16.61■□□□□ 0.25
TTC39A-216ENST00000530004 GPT2Q8TD30 523 aa16.61■□□□□ 0.25
TTC39A-216ENST00000530004 DCAF4Q8WV16 495 aa16.61■□□□□ 0.25
TTC39A-216ENST00000530004 TCHHQ07283 1943 aa16.6■□□□□ 0.25
TTC39A-216ENST00000530004 MYH4Q9Y623 1939 aa16.6■□□□□ 0.25
TTC39A-216ENST00000530004 WDR46O15213 610 aaKnown RBP16.6■□□□□ 0.25
TTC39A-216ENST00000530004 PARP1P09874 1014 aaKnown RBP16.6■□□□□ 0.25
TTC39A-216ENST00000530004 CETPP11597 493 aa16.6■□□□□ 0.25
TTC39A-216ENST00000530004 HSPA6P17066 643 aa16.6■□□□□ 0.25
TTC39A-216ENST00000530004 FASTKD5Q7L8L6 764 aaKnown RBP16.6■□□□□ 0.25
TTC39A-216ENST00000530004 BRAPQ7Z569 592 aa16.6■□□□□ 0.25
TTC39A-216ENST00000530004 NUP88Q99567 741 aaPredicted RBP16.6■□□□□ 0.25
TTC39A-216ENST00000530004 SCAND2PQ9GZW5 306 aaPredicted RBP16.6■□□□□ 0.25
TTC39A-216ENST00000530004 KCNJ14Q9UNX9 436 aa16.6■□□□□ 0.25
TTC39A-216ENST00000530004 CCL15-CCL14A0A0B4J2E2 113 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 MMP1P03956 469 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 GOLGA8HP0CJ92 632 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 BMP3P12645 472 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 ZNF543Q08ER8 600 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 GRM1Q13255 1194 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 GNL2Q13823 731 aaKnown RBP16.59■□□□□ 0.25
TTC39A-216ENST00000530004 CCL15Q16663 113 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 CCDC96Q2M329 555 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 FAM83BQ5T0W9 1011 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 GADL1Q6ZQY3 521 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 PIBF1Q8WXW3 757 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 CAPNS2Q96L46 248 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 LZTS2Q9BRK4 669 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 GZF1Q9H116 711 aaPredicted RBP16.59■□□□□ 0.25
TTC39A-216ENST00000530004 CFAP45Q9UL16 551 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 FRMPD2Q68DX3 1309 aaPredicted RBP16.59■□□□□ 0.25
TTC39A-216ENST00000530004 MANSC4A6NHS7 340 aaPredicted RBP16.59■□□□□ 0.25
TTC39A-216ENST00000530004 XBP1P17861 261 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 SAFBQ15424 915 aaKnown RBP eCLIP16.59■□□□□ 0.25
TTC39A-216ENST00000530004 ASPRV1Q53RT3 343 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 TREML2Q5T2D2 321 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 GPATCH4Q5T3I0 446 aaKnown RBP16.59■□□□□ 0.25
TTC39A-216ENST00000530004 KCTD1Q719H9 257 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 BRI3BPQ8WY22 251 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 SPATA32Q96LK8 384 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 ZNF396Q96N95 335 aaPredicted RBP16.59■□□□□ 0.25
TTC39A-216ENST00000530004 RPAP3Q9H6T3 665 aaPredicted RBP16.59■□□□□ 0.25
TTC39A-216ENST00000530004 VPS54Q9P1Q0 977 aa16.59■□□□□ 0.25
TTC39A-216ENST00000530004 RBM27Q9P2N5 1060 aaKnown RBP16.59■□□□□ 0.25
TTC39A-216ENST00000530004 TESPA1A2RU30 521 aaPredicted RBP16.58■□□□□ 0.24
TTC39A-216ENST00000530004 KLRF2D3W0D1 207 aa16.58■□□□□ 0.24
TTC39A-216ENST00000530004 MBD3O95983 291 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms