RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 DDX11Q96FC9 970 aa9.29□□□□□ -0.92
CCDC90B-212ENST00000529312 YTHDC1Q96MU7 727 aaKnown RBP9.29□□□□□ -0.92
CCDC90B-212ENST00000529312 MMP19Q99542 508 aa9.29□□□□□ -0.92
CCDC90B-212ENST00000529312 FBXO40Q9UH90 709 aa9.29□□□□□ -0.92
CCDC90B-212ENST00000529312 DDX20Q9UHI6 824 aaKnown RBP9.29□□□□□ -0.92
CCDC90B-212ENST00000529312 SIPA1L1O43166 1804 aa9.28□□□□□ -0.92
CCDC90B-212ENST00000529312 TSPY2A6NKD2 308 aa9.28□□□□□ -0.92
CCDC90B-212ENST00000529312 TRIM6-TRIM34B2RNG4 842 aa9.28□□□□□ -0.92
CCDC90B-212ENST00000529312 ATP2A1O14983 1001 aa9.28□□□□□ -0.92
CCDC90B-212ENST00000529312 SEPT4O43236 478 aa9.28□□□□□ -0.92
CCDC90B-212ENST00000529312 COBLO75128 1261 aa9.28□□□□□ -0.92
CCDC90B-212ENST00000529312 BMP3P12645 472 aa9.28□□□□□ -0.92
CCDC90B-212ENST00000529312 CYP2C19P33261 490 aa9.28□□□□□ -0.92
CCDC90B-212ENST00000529312 NT5C2P49902 561 aa9.28□□□□□ -0.92
CCDC90B-212ENST00000529312 OAZ1P54368 228 aa9.28□□□□□ -0.92
CCDC90B-212ENST00000529312 SLFN13Q68D06 897 aa9.28□□□□□ -0.92
CCDC90B-212ENST00000529312 FAM160B2Q86V87 743 aa9.28□□□□□ -0.92
CCDC90B-212ENST00000529312 GMCL1P1Q8NEA9 526 aa9.28□□□□□ -0.92
CCDC90B-212ENST00000529312 SEC62Q99442 399 aaKnown RBP9.28□□□□□ -0.92
CCDC90B-212ENST00000529312 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.28□□□□□ -0.92
CCDC90B-212ENST00000529312 TEX13BQ9BXU2 312 aa9.28□□□□□ -0.92
CCDC90B-212ENST00000529312 ZSWIM8A7E2V4 1837 aa9.28□□□□□ -0.92
CCDC90B-212ENST00000529312 CEP290O15078 2479 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 IGKV6D-41A0A0C4DH26 115 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 SMIM22K7EJ46 135 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 HIP1O00291 1037 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 PLA2G6O60733 806 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 PRDM1O75626 825 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 NDUFB10O96000 172 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 PCP11498 1178 aaKnown RBP9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 BMP8BP34820 402 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 RCSD1Q6JBY9 416 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 CLEC10AQ8IUN9 316 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 SMC5Q8IY18 1101 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 CHST13Q8NET6 341 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 OTUD7AQ8TE49 926 aaPredicted RBP9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 STAG1Q8WVM7 1258 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 RILPL2Q969X0 211 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 CEP95Q96GE4 821 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 TTC14Q96N46 770 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 HS3ST6Q96QI5 342 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 TINF2Q9BSI4 451 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 SENP6Q9GZR1 1112 aaPredicted RBP9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 FBXO28Q9NVF7 368 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 FLRT1Q9NZU1 646 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 PRKAG2Q9UGJ0 569 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 ANAPC4Q9UJX5 808 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 PNMA2Q9UL42 364 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 CNPY2Q9Y2B0 182 aa9.27□□□□□ -0.93
CCDC90B-212ENST00000529312 ROBO3Q96MS0 1386 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 POTEB3A0JP26 581 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 KBTBD13C9JR72 458 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 DNM1LO00429 736 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 RANBP6O60518 1105 aaKnown RBP9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 IGHA2P01877 340 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 FGAP02671 866 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 COL6A1P12109 1028 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 SLC1A4P43007 532 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 SLC4A3P48751 1232 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 IKQ13123 557 aaPredicted RBP9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 TKFCQ3LXA3 575 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 CCDC178Q5BJE1 867 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 FAM47AQ5JRC9 791 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 B4GALNT3Q6L9W6 998 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 POTEBQ6S5H4 581 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 CHD1LQ86WJ1 897 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 C7orf61Q8IZ16 206 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 CPXCR1Q8N123 301 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 PLCD3Q8N3E9 789 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 DIS3LQ8TF46 1054 aaKnown RBP9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 KIFC2Q96AC6 838 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 FAM212AQ96EL1 285 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 GMCL1Q96IK5 515 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 MAML3Q96JK9 1138 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 LNPKQ9C0E8 428 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 OSBPL3Q9H4L5 887 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 RNF41Q9H4P4 317 aaPredicted RBP9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 EPB41L4AQ9HCS5 686 aaPredicted RBP9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 TOMM22Q9NS69 142 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 RBM27Q9P2N5 1060 aaKnown RBP9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 ZNF214Q9UL59 606 aaPredicted RBP9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 ISY1Q9ULR0 285 aaKnown RBP9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 SALL3Q9BXA9 1300 aa9.26□□□□□ -0.93
CCDC90B-212ENST00000529312 TMEM232C9JQI7 657 aa9.25□□□□□ -0.93
CCDC90B-212ENST00000529312 ORC4O43929 436 aa9.25□□□□□ -0.93
CCDC90B-212ENST00000529312 FGRP09769 529 aa9.25□□□□□ -0.93
CCDC90B-212ENST00000529312 RARBP10826 455 aa9.25□□□□□ -0.93
CCDC90B-212ENST00000529312 CYBAP13498 195 aa9.25□□□□□ -0.93
CCDC90B-212ENST00000529312 FXR1P51114 621 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCDC90B-212ENST00000529312 STAT2P52630 851 aa9.25□□□□□ -0.93
CCDC90B-212ENST00000529312 NUCB1Q02818 461 aa9.25□□□□□ -0.93
CCDC90B-212ENST00000529312 ZNF792Q3KQV3 632 aa9.25□□□□□ -0.93
CCDC90B-212ENST00000529312 SNRNP48Q6IEG0 339 aaKnown RBP9.25□□□□□ -0.93
CCDC90B-212ENST00000529312 MFSD6Q6ZSS7 791 aa9.25□□□□□ -0.93
CCDC90B-212ENST00000529312 ZNF467Q7Z7K2 595 aaPredicted RBP9.25□□□□□ -0.93
CCDC90B-212ENST00000529312 RNF180Q86T96 592 aa9.25□□□□□ -0.93
CCDC90B-212ENST00000529312 ANKRD35Q8N283 1001 aa9.25□□□□□ -0.93
CCDC90B-212ENST00000529312 NUP88Q99567 741 aaPredicted RBP9.25□□□□□ -0.93
CCDC90B-212ENST00000529312 LBHD1Q9BQE6 289 aaPredicted RBP9.25□□□□□ -0.93
CCDC90B-212ENST00000529312 SLC38A10Q9HBR0 1119 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms