RNA–Protein interactions for RNA: ENST00000529265.5

BEST1-206, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,421 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-206ENST00000529265 SLKQ9H2G2 1235 aaPredicted RBP16.19■□□□□ 0.18
BEST1-206ENST00000529265 RBM28Q9NW13 759 aaKnown RBP16.19■□□□□ 0.18
BEST1-206ENST00000529265 PPP1R9AQ9ULJ8 1098 aa16.19■□□□□ 0.18
BEST1-206ENST00000529265 TPCN1Q9ULQ1 816 aa16.19■□□□□ 0.18
BEST1-206ENST00000529265 RLFQ13129 1914 aa16.19■□□□□ 0.18
BEST1-206ENST00000529265 COL11A1P12107 1806 aaPredicted RBP16.19■□□□□ 0.18
BEST1-206ENST00000529265 CCDC196A0A1B0GTZ2 297 aa16.19■□□□□ 0.18
BEST1-206ENST00000529265 PALM3A6NDB9 673 aaPredicted RBP16.19■□□□□ 0.18
BEST1-206ENST00000529265 TRPA1O75762 1119 aa16.19■□□□□ 0.18
BEST1-206ENST00000529265 DSG3P32926 999 aa16.19■□□□□ 0.18
BEST1-206ENST00000529265 RCAN1P53805 252 aa16.19■□□□□ 0.18
BEST1-206ENST00000529265 EVCP57679 992 aa16.19■□□□□ 0.18
BEST1-206ENST00000529265 HERVK_113P62684 666 aa16.19■□□□□ 0.18
BEST1-206ENST00000529265 VAT1LQ9HCJ6 419 aa16.19■□□□□ 0.18
BEST1-206ENST00000529265 RNF186Q9NXI6 227 aa16.19■□□□□ 0.18
BEST1-206ENST00000529265 LIMCH1Q9UPQ0 1083 aa16.19■□□□□ 0.18
BEST1-206ENST00000529265 MYPNQ86TC9 1320 aa16.18■□□□□ 0.18
BEST1-206ENST00000529265 SPDYE16A6NNV3 312 aaPredicted RBP16.18■□□□□ 0.18
BEST1-206ENST00000529265 CA12O43570 354 aa16.18■□□□□ 0.18
BEST1-206ENST00000529265 PLA2G6O60733 806 aa16.18■□□□□ 0.18
BEST1-206ENST00000529265 PPP2R5BQ15173 497 aa16.18■□□□□ 0.18
BEST1-206ENST00000529265 SYDE2Q5VT97 1194 aa16.18■□□□□ 0.18
BEST1-206ENST00000529265 GTF3C2Q8WUA4 911 aaPredicted RBP16.18■□□□□ 0.18
BEST1-206ENST00000529265 ATG4CQ96DT6 458 aa16.18■□□□□ 0.18
BEST1-206ENST00000529265 LZTS2Q9BRK4 669 aa16.18■□□□□ 0.18
BEST1-206ENST00000529265 PAGR1Q9BTK6 254 aa16.18■□□□□ 0.18
BEST1-206ENST00000529265 CPVLQ9H3G5 476 aa16.18■□□□□ 0.18
BEST1-206ENST00000529265 PRR12Q9ULL5 1215 aa16.18■□□□□ 0.18
BEST1-206ENST00000529265 ZBED4O75132 1171 aa16.17■□□□□ 0.18
BEST1-206ENST00000529265 MCM2P49736 904 aa16.17■□□□□ 0.18
BEST1-206ENST00000529265 CRHR2Q13324 411 aa16.17■□□□□ 0.18
BEST1-206ENST00000529265 BTNL9Q6UXG8 535 aa16.17■□□□□ 0.18
BEST1-206ENST00000529265 CCDC82Q8N4S0 544 aa16.17■□□□□ 0.18
BEST1-206ENST00000529265 ZSCAN31Q96LW9 406 aaPredicted RBP16.17■□□□□ 0.18
BEST1-206ENST00000529265 HPS5Q9UPZ3 1129 aa16.17■□□□□ 0.18
BEST1-206ENST00000529265 CPLX1O14810 134 aa16.16■□□□□ 0.18
BEST1-206ENST00000529265 PLEKHA8P1O95397 391 aa16.16■□□□□ 0.18
BEST1-206ENST00000529265 TBC1D8O95759 1140 aa16.16■□□□□ 0.18
BEST1-206ENST00000529265 GCLCP48506 637 aaPredicted RBP16.16■□□□□ 0.18
BEST1-206ENST00000529265 PLS1Q14651 629 aa16.16■□□□□ 0.18
BEST1-206ENST00000529265 ME3Q16798 604 aa16.16■□□□□ 0.18
BEST1-206ENST00000529265 ADGRF4Q8IZF3 695 aa16.16■□□□□ 0.18
BEST1-206ENST00000529265 CMTR1Q8N1G2 835 aaKnown RBP16.16■□□□□ 0.18
BEST1-206ENST00000529265 ANKRD13CQ8N6S4 541 aa16.16■□□□□ 0.18
BEST1-206ENST00000529265 NCOA5Q9HCD5 579 aaKnown RBP16.16■□□□□ 0.18
BEST1-206ENST00000529265 CPA4Q9UI42 421 aa16.16■□□□□ 0.18
BEST1-206ENST00000529265 VWA5AO00534 786 aa16.15■□□□□ 0.18
BEST1-206ENST00000529265 TLR2O60603 784 aa16.15■□□□□ 0.18
BEST1-206ENST00000529265 PFKFB2O60825 505 aa16.15■□□□□ 0.18
BEST1-206ENST00000529265 FDX1P10109 184 aa16.15■□□□□ 0.18
BEST1-206ENST00000529265 CDC27P30260 824 aa16.15■□□□□ 0.18
BEST1-206ENST00000529265 ADD1P35611 737 aaKnown RBP16.15■□□□□ 0.18
BEST1-206ENST00000529265 SLC4A3P48751 1232 aa16.15■□□□□ 0.18
BEST1-206ENST00000529265 SNAP25P60880 206 aa16.15■□□□□ 0.18
BEST1-206ENST00000529265 CCDC174Q6PII3 467 aa16.15■□□□□ 0.18
BEST1-206ENST00000529265 CPLX2Q6PUV4 134 aaKnown RBP16.15■□□□□ 0.18
BEST1-206ENST00000529265 TMTC3Q6ZXV5 915 aa16.15■□□□□ 0.18
BEST1-206ENST00000529265 CPXCR1Q8N123 301 aa16.15■□□□□ 0.18
BEST1-206ENST00000529265 MB21D1Q8N884 522 aa16.15■□□□□ 0.18
BEST1-206ENST00000529265 PIBF1Q8WXW3 757 aa16.15■□□□□ 0.18
BEST1-206ENST00000529265 CD2BP2O95400 341 aaKnown RBP16.14■□□□□ 0.17
BEST1-206ENST00000529265 LARGE1O95461 756 aa16.14■□□□□ 0.17
BEST1-206ENST00000529265 SCRN1Q12765 414 aa16.14■□□□□ 0.17
BEST1-206ENST00000529265 LBX2Q6XYB7 198 aa16.14■□□□□ 0.17
BEST1-206ENST00000529265 NBPF11Q86T75 865 aa16.14■□□□□ 0.17
BEST1-206ENST00000529265 HOMER1Q86YM7 354 aa16.14■□□□□ 0.17
BEST1-206ENST00000529265 SRBD1Q8N5C6 995 aaKnown RBP16.14■□□□□ 0.17
BEST1-206ENST00000529265 NECAB1Q8N987 351 aa16.14■□□□□ 0.17
BEST1-206ENST00000529265 SH2B1Q9NRF2 756 aaPredicted RBP16.14■□□□□ 0.17
BEST1-206ENST00000529265 FAM217BQ9NTX9 383 aaPredicted RBP16.14■□□□□ 0.17
BEST1-206ENST00000529265 SAGE1Q9NXZ1 904 aa16.14■□□□□ 0.17
BEST1-206ENST00000529265 RABGAP1Q9Y3P9 1069 aa16.14■□□□□ 0.17
BEST1-206ENST00000529265 NID2Q14112 1375 aa16.14■□□□□ 0.17
BEST1-206ENST00000529265 SMCHD1A6NHR9 2005 aa16.13■□□□□ 0.17
BEST1-206ENST00000529265 SMARCA1P28370 1054 aa16.13■□□□□ 0.17
BEST1-206ENST00000529265 AKAP17AQ02040 695 aaKnown RBP16.13■□□□□ 0.17
BEST1-206ENST00000529265 CDC37Q16543 378 aaPredicted RBP16.13■□□□□ 0.17
BEST1-206ENST00000529265 CCAR1Q8IX12 1150 aaKnown RBP16.13■□□□□ 0.17
BEST1-206ENST00000529265 GPRC5AQ8NFJ5 357 aa16.13■□□□□ 0.17
BEST1-206ENST00000529265 RRP36Q96EU6 259 aaKnown RBP16.13■□□□□ 0.17
BEST1-206ENST00000529265 SPZ1Q9BXG8 430 aa16.13■□□□□ 0.17
BEST1-206ENST00000529265 RIOX1Q9H6W3 641 aa16.13■□□□□ 0.17
BEST1-206ENST00000529265 JMJD4Q9H9V9 463 aa16.13■□□□□ 0.17
BEST1-206ENST00000529265 SLC38A10Q9HBR0 1119 aa16.13■□□□□ 0.17
BEST1-206ENST00000529265 WBP1LQ9NX94 342 aa16.13■□□□□ 0.17
BEST1-206ENST00000529265 RBPJLQ9UBG7 517 aa16.13■□□□□ 0.17
BEST1-206ENST00000529265 SEC63Q9UGP8 760 aaKnown RBP16.13■□□□□ 0.17
BEST1-206ENST00000529265 ADAMTS5Q9UNA0 930 aa16.13■□□□□ 0.17
BEST1-206ENST00000529265 CYTH3O43739 400 aa16.12■□□□□ 0.17
BEST1-206ENST00000529265 PEX10O60683 326 aa16.12■□□□□ 0.17
BEST1-206ENST00000529265 TMEM132BQ14DG7 1078 aa16.12■□□□□ 0.17
BEST1-206ENST00000529265 GTF3C6Q969F1 213 aa16.12■□□□□ 0.17
BEST1-206ENST00000529265 PIGSQ96S52 555 aa16.12■□□□□ 0.17
BEST1-206ENST00000529265 RANBP17Q9H2T7 1088 aaKnown RBP16.12■□□□□ 0.17
BEST1-206ENST00000529265 R3HDMLQ9H3Y0 253 aa16.12■□□□□ 0.17
BEST1-206ENST00000529265 RAVER2Q9HCJ3 691 aaKnown RBP16.12■□□□□ 0.17
BEST1-206ENST00000529265 TXNRD2Q9NNW7 524 aa16.12■□□□□ 0.17
BEST1-206ENST00000529265 BTBD7Q9P203 1132 aa16.12■□□□□ 0.17
BEST1-206ENST00000529265 A0A0G2JMZ2 1700 aa16.12■□□□□ 0.17
BEST1-206ENST00000529265 PPFIA3O75145 1194 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms