RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 CYBAP13498 195 aa14.29□□□□□ -0.12
COPB1-206ENST00000529210 CCND3P30281 292 aaPredicted RBP14.29□□□□□ -0.12
COPB1-206ENST00000529210 OAZ1P54368 228 aa14.29□□□□□ -0.12
COPB1-206ENST00000529210 CTDSPL2Q05D32 466 aa14.29□□□□□ -0.12
COPB1-206ENST00000529210 PLS1Q14651 629 aa14.29□□□□□ -0.12
COPB1-206ENST00000529210 NCAPG2Q86XI2 1143 aa14.29□□□□□ -0.12
COPB1-206ENST00000529210 RILPL2Q969X0 211 aa14.29□□□□□ -0.12
COPB1-206ENST00000529210 PAWRQ96IZ0 340 aaKnown RBP14.29□□□□□ -0.12
COPB1-206ENST00000529210 NUP88Q99567 741 aaPredicted RBP14.29□□□□□ -0.12
COPB1-206ENST00000529210 NBPF3Q9H094 633 aa14.29□□□□□ -0.12
COPB1-206ENST00000529210 SLC38A10Q9HBR0 1119 aa14.29□□□□□ -0.12
COPB1-206ENST00000529210 NRBP1Q9UHY1 535 aa14.29□□□□□ -0.12
COPB1-206ENST00000529210 COL6A1P12109 1028 aa14.28□□□□□ -0.12
COPB1-206ENST00000529210 BMP3P12645 472 aa14.28□□□□□ -0.12
COPB1-206ENST00000529210 SLFN13Q68D06 897 aa14.28□□□□□ -0.12
COPB1-206ENST00000529210 LRRC47Q8N1G4 583 aaKnown RBP14.28□□□□□ -0.12
COPB1-206ENST00000529210 STAG1Q8WVM7 1258 aa14.28□□□□□ -0.12
COPB1-206ENST00000529210 MAML3Q96JK9 1138 aa14.28□□□□□ -0.12
COPB1-206ENST00000529210 PLXNA1Q9UIW2 1896 aa14.28□□□□□ -0.12
COPB1-206ENST00000529210 NR2E3Q9Y5X4 410 aa14.28□□□□□ -0.12
COPB1-206ENST00000529210 H0YGN5 161 aa14.27□□□□□ -0.13
COPB1-206ENST00000529210 RAD21O60216 631 aa14.27□□□□□ -0.13
COPB1-206ENST00000529210 ZNF792Q3KQV3 632 aa14.27□□□□□ -0.13
COPB1-206ENST00000529210 FAM160B2Q86V87 743 aa14.27□□□□□ -0.13
COPB1-206ENST00000529210 DIS3LQ8TF46 1054 aaKnown RBP14.27□□□□□ -0.13
COPB1-206ENST00000529210 DPF3Q92784 378 aa14.27□□□□□ -0.13
COPB1-206ENST00000529210 MMP19Q99542 508 aa14.27□□□□□ -0.13
COPB1-206ENST00000529210 INCENPQ9NQS7 918 aa14.27□□□□□ -0.13
COPB1-206ENST00000529210 DDX20Q9UHI6 824 aaKnown RBP14.27□□□□□ -0.13
COPB1-206ENST00000529210 DNAJC25-GNG10A0A024R161 153 aa14.26□□□□□ -0.13
COPB1-206ENST00000529210 ZBED4O75132 1171 aa14.26□□□□□ -0.13
COPB1-206ENST00000529210 PDE4AP27815 886 aa14.26□□□□□ -0.13
COPB1-206ENST00000529210 CYP2C19P33261 490 aa14.26□□□□□ -0.13
COPB1-206ENST00000529210 SLC1A4P43007 532 aa14.26□□□□□ -0.13
COPB1-206ENST00000529210 STAT2P52630 851 aa14.26□□□□□ -0.13
COPB1-206ENST00000529210 KCTD2Q14681 263 aa14.26□□□□□ -0.13
COPB1-206ENST00000529210 AKNAD1Q5T1N1 836 aa14.26□□□□□ -0.13
COPB1-206ENST00000529210 MSL3Q8N5Y2 521 aaKnown RBP14.26□□□□□ -0.13
COPB1-206ENST00000529210 TRPV1Q8NER1 839 aa14.26□□□□□ -0.13
COPB1-206ENST00000529210 CHURC1Q8WUH1 139 aa14.26□□□□□ -0.13
COPB1-206ENST00000529210 DSCC1Q9BVC3 393 aa14.26□□□□□ -0.13
COPB1-206ENST00000529210 C11orf49Q9H6J7 331 aa14.26□□□□□ -0.13
COPB1-206ENST00000529210 STX8Q9UNK0 236 aa14.26□□□□□ -0.13
COPB1-206ENST00000529210 RANBP2P49792 3224 aaKnown RBP14.25□□□□□ -0.13
COPB1-206ENST00000529210 PFASO15067 1338 aa14.25□□□□□ -0.13
COPB1-206ENST00000529210 SEPT4O43236 478 aa14.25□□□□□ -0.13
COPB1-206ENST00000529210 RANBP6O60518 1105 aaKnown RBP14.25□□□□□ -0.13
COPB1-206ENST00000529210 HABP4Q5JVS0 413 aaKnown RBP14.25□□□□□ -0.13
COPB1-206ENST00000529210 TTC22Q5TAA0 569 aa14.25□□□□□ -0.13
COPB1-206ENST00000529210 SNRNP48Q6IEG0 339 aaKnown RBP14.25□□□□□ -0.13
COPB1-206ENST00000529210 RCSD1Q6JBY9 416 aa14.25□□□□□ -0.13
COPB1-206ENST00000529210 CHST13Q8NET6 341 aa14.25□□□□□ -0.13
COPB1-206ENST00000529210 TTC14Q96N46 770 aa14.25□□□□□ -0.13
COPB1-206ENST00000529210 PRO3102Q9H379 93 aa14.25□□□□□ -0.13
COPB1-206ENST00000529210 RNF41Q9H4P4 317 aaPredicted RBP14.25□□□□□ -0.13
COPB1-206ENST00000529210 DIAPH3Q9NSV4 1193 aa14.25□□□□□ -0.13
COPB1-206ENST00000529210 FBXO40Q9UH90 709 aa14.25□□□□□ -0.13
COPB1-206ENST00000529210 RIPK3Q9Y572 518 aa14.25□□□□□ -0.13
COPB1-206ENST00000529210 RAD50Q92878 1312 aa14.24□□□□□ -0.13
COPB1-206ENST00000529210 TMEM232C9JQI7 657 aa14.24□□□□□ -0.13
COPB1-206ENST00000529210 NMT2O60551 498 aa14.24□□□□□ -0.13
COPB1-206ENST00000529210 GSPT1P15170 499 aaKnown RBP14.24□□□□□ -0.13
COPB1-206ENST00000529210 SAMD1Q6SPF0 538 aaPredicted RBP14.24□□□□□ -0.13
COPB1-206ENST00000529210 CWC27Q6UX04 472 aaKnown RBP14.24□□□□□ -0.13
COPB1-206ENST00000529210 MAMDC4Q6UXC1 1216 aa14.24□□□□□ -0.13
COPB1-206ENST00000529210 BTNL9Q6UXG8 535 aa14.24□□□□□ -0.13
COPB1-206ENST00000529210 MFSD6Q6ZSS7 791 aa14.24□□□□□ -0.13
COPB1-206ENST00000529210 ZNF467Q7Z7K2 595 aaPredicted RBP14.24□□□□□ -0.13
COPB1-206ENST00000529210 DCAF4Q8WV16 495 aa14.24□□□□□ -0.13
COPB1-206ENST00000529210 KIFC2Q96AC6 838 aa14.24□□□□□ -0.13
COPB1-206ENST00000529210 TINF2Q9BSI4 451 aa14.24□□□□□ -0.13
COPB1-206ENST00000529210 ZNF536O15090 1300 aa14.23□□□□□ -0.13
COPB1-206ENST00000529210 SYNGAP1Q96PV0 1343 aa14.23□□□□□ -0.13
COPB1-206ENST00000529210 EVI5O60447 810 aa14.23□□□□□ -0.13
COPB1-206ENST00000529210 TOP1P11387 765 aaKnown RBP14.23□□□□□ -0.13
COPB1-206ENST00000529210 MCCP23508 829 aa14.23□□□□□ -0.13
COPB1-206ENST00000529210 TKFCQ3LXA3 575 aa14.23□□□□□ -0.13
COPB1-206ENST00000529210 TBC1D10CQ8IV04 446 aa14.23□□□□□ -0.13
COPB1-206ENST00000529210 DNM1LO00429 736 aa14.22□□□□□ -0.13
COPB1-206ENST00000529210 ZNF213O14771 459 aa14.22□□□□□ -0.13
COPB1-206ENST00000529210 PGK2P07205 417 aa14.22□□□□□ -0.13
COPB1-206ENST00000529210 SNHG28P0DPA3 235 aa14.22□□□□□ -0.13
COPB1-206ENST00000529210 HAND2P61296 217 aa14.22□□□□□ -0.13
COPB1-206ENST00000529210 DGKHQ86XP1 1220 aa14.22□□□□□ -0.13
COPB1-206ENST00000529210 ESR2Q92731 530 aa14.22□□□□□ -0.13
COPB1-206ENST00000529210 TMEM47Q9BQJ4 181 aa14.22□□□□□ -0.13
COPB1-206ENST00000529210 RAVER2Q9HCJ3 691 aaKnown RBP14.22□□□□□ -0.13
COPB1-206ENST00000529210 CTNNA3Q9UI47 895 aa14.22□□□□□ -0.13
COPB1-206ENST00000529210 COLQQ9Y215 455 aaPredicted RBP14.22□□□□□ -0.13
COPB1-206ENST00000529210 CTDP1Q9Y5B0 961 aaPredicted RBP14.22□□□□□ -0.13
COPB1-206ENST00000529210 DNAH12Q6ZR08 3092 aa14.22□□□□□ -0.13
COPB1-206ENST00000529210 SMCHD1A6NHR9 2005 aa14.21□□□□□ -0.13
COPB1-206ENST00000529210 A0A1W2PPC1 479 aa14.21□□□□□ -0.13
COPB1-206ENST00000529210 ZNF865P0CJ78 1059 aaPredicted RBP14.21□□□□□ -0.13
COPB1-206ENST00000529210 CNGA1P29973 690 aa14.21□□□□□ -0.13
COPB1-206ENST00000529210 CCDC178Q5BJE1 867 aa14.21□□□□□ -0.13
COPB1-206ENST00000529210 KCTD1Q719H9 257 aa14.21□□□□□ -0.13
COPB1-206ENST00000529210 CPXCR1Q8N123 301 aa14.21□□□□□ -0.13
COPB1-206ENST00000529210 ARRDC4Q8NCT1 418 aa14.21□□□□□ -0.13
COPB1-206ENST00000529210 ANKS1AQ92625 1134 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms