RNA–Protein interactions for RNA: ENST00000528935.1

PACS1-207, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-207ENST00000528935 KCTD2Q14681 263 aa17.23■□□□□ 0.35
PACS1-207ENST00000528935 HABP4Q5JVS0 413 aaKnown RBP17.23■□□□□ 0.35
PACS1-207ENST00000528935 TRPV1Q8NER1 839 aa17.23■□□□□ 0.35
PACS1-207ENST00000528935 TEX13BQ9BXU2 312 aa17.23■□□□□ 0.35
PACS1-207ENST00000528935 IL17RBQ9NRM6 502 aa17.23■□□□□ 0.35
PACS1-207ENST00000528935 DDX20Q9UHI6 824 aaKnown RBP17.23■□□□□ 0.35
PACS1-207ENST00000528935 COLQQ9Y215 455 aaPredicted RBP17.23■□□□□ 0.35
PACS1-207ENST00000528935 TACC3Q9Y6A5 838 aa17.23■□□□□ 0.35
PACS1-207ENST00000528935 MYH4Q9Y623 1939 aa17.23■□□□□ 0.35
PACS1-207ENST00000528935 COL11A1P12107 1806 aaPredicted RBP17.22■□□□□ 0.35
PACS1-207ENST00000528935 ATP2A1O14983 1001 aa17.22■□□□□ 0.35
PACS1-207ENST00000528935 RANBP6O60518 1105 aaKnown RBP17.22■□□□□ 0.35
PACS1-207ENST00000528935 BMP3P12645 472 aa17.22■□□□□ 0.35
PACS1-207ENST00000528935 CYBAP13498 195 aa17.22■□□□□ 0.35
PACS1-207ENST00000528935 CNGA1P29973 690 aa17.22■□□□□ 0.35
PACS1-207ENST00000528935 SNRNP48Q6IEG0 339 aaKnown RBP17.22■□□□□ 0.35
PACS1-207ENST00000528935 KIFC2Q96AC6 838 aa17.22■□□□□ 0.35
PACS1-207ENST00000528935 GMCL1Q96IK5 515 aa17.22■□□□□ 0.35
PACS1-207ENST00000528935 MAML3Q96JK9 1138 aa17.22■□□□□ 0.35
PACS1-207ENST00000528935 STX8Q9UNK0 236 aa17.22■□□□□ 0.35
PACS1-207ENST00000528935 CTDP1Q9Y5B0 961 aaPredicted RBP17.22■□□□□ 0.35
PACS1-207ENST00000528935 SLC38A10Q9HBR0 1119 aa17.21■□□□□ 0.35
PACS1-207ENST00000528935 DIS3Q9Y2L1 958 aaKnown RBP17.21■□□□□ 0.35
PACS1-207ENST00000528935 TMEM232C9JQI7 657 aa17.2■□□□□ 0.34
PACS1-207ENST00000528935 HIP1O00291 1037 aa17.2■□□□□ 0.34
PACS1-207ENST00000528935 NMT2O60551 498 aa17.2■□□□□ 0.34
PACS1-207ENST00000528935 PGK2P07205 417 aa17.2■□□□□ 0.34
PACS1-207ENST00000528935 FDX1P10109 184 aa17.2■□□□□ 0.34
PACS1-207ENST00000528935 COL6A1P12109 1028 aa17.2■□□□□ 0.34
PACS1-207ENST00000528935 SLC1A4P43007 532 aa17.2■□□□□ 0.34
PACS1-207ENST00000528935 NOVP48745 357 aa17.2■□□□□ 0.34
PACS1-207ENST00000528935 OAZ1P54368 228 aa17.2■□□□□ 0.34
PACS1-207ENST00000528935 ZNF792Q3KQV3 632 aa17.2■□□□□ 0.34
PACS1-207ENST00000528935 CPXCR1Q8N123 301 aa17.2■□□□□ 0.34
PACS1-207ENST00000528935 CHURC1Q8WUH1 139 aa17.2■□□□□ 0.34
PACS1-207ENST00000528935 TOMM22Q9NS69 142 aa17.2■□□□□ 0.34
PACS1-207ENST00000528935 DIAPH3Q9NSV4 1193 aa17.2■□□□□ 0.34
PACS1-207ENST00000528935 RIPK3Q9Y572 518 aa17.2■□□□□ 0.34
PACS1-207ENST00000528935 PCP11498 1178 aaKnown RBP17.19■□□□□ 0.34
PACS1-207ENST00000528935 MCCP23508 829 aa17.19■□□□□ 0.34
PACS1-207ENST00000528935 STAT2P52630 851 aa17.19■□□□□ 0.34
PACS1-207ENST00000528935 RCSD1Q6JBY9 416 aa17.19■□□□□ 0.34
PACS1-207ENST00000528935 CWC27Q6UX04 472 aaKnown RBP17.19■□□□□ 0.34
PACS1-207ENST00000528935 CHRDL2Q6WN34 429 aa17.19■□□□□ 0.34
PACS1-207ENST00000528935 FAM160B2Q86V87 743 aa17.19■□□□□ 0.34
PACS1-207ENST00000528935 STAG1Q8WVM7 1258 aa17.19■□□□□ 0.34
PACS1-207ENST00000528935 RAVER2Q9HCJ3 691 aaKnown RBP17.19■□□□□ 0.34
PACS1-207ENST00000528935 TCP11L1Q9NUJ3 509 aa17.19■□□□□ 0.34
PACS1-207ENST00000528935 ISY1Q9ULR0 285 aaKnown RBP17.19■□□□□ 0.34
PACS1-207ENST00000528935 RBM19Q9Y4C8 960 aaKnown RBP17.19■□□□□ 0.34
PACS1-207ENST00000528935 PFASO15067 1338 aa17.19■□□□□ 0.34
PACS1-207ENST00000528935 SEPT4O43236 478 aa17.18■□□□□ 0.34
PACS1-207ENST00000528935 PLA2G6O60733 806 aa17.18■□□□□ 0.34
PACS1-207ENST00000528935 EIF5BO60841 1220 aaKnown RBP17.18■□□□□ 0.34
PACS1-207ENST00000528935 SLC4A3P48751 1232 aa17.18■□□□□ 0.34
PACS1-207ENST00000528935 HAND2P61296 217 aa17.18■□□□□ 0.34
PACS1-207ENST00000528935 RRP12Q5JTH9 1297 aaKnown RBP17.18■□□□□ 0.34
PACS1-207ENST00000528935 PRAMEF19Q5SWL8 479 aa17.18■□□□□ 0.34
PACS1-207ENST00000528935 AKNAD1Q5T1N1 836 aa17.18■□□□□ 0.34
PACS1-207ENST00000528935 MFSD6Q6ZSS7 791 aa17.18■□□□□ 0.34
PACS1-207ENST00000528935 TINF2Q9BSI4 451 aa17.18■□□□□ 0.34
PACS1-207ENST00000528935 NRBP1Q9UHY1 535 aa17.18■□□□□ 0.34
PACS1-207ENST00000528935 ZNFX1Q9P2E3 1918 aaKnown RBP17.17■□□□□ 0.34
PACS1-207ENST00000528935 PDE4AP27815 886 aa17.17■□□□□ 0.34
PACS1-207ENST00000528935 IKQ13123 557 aaPredicted RBP17.17■□□□□ 0.34
PACS1-207ENST00000528935 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.17■□□□□ 0.34
PACS1-207ENST00000528935 CHST13Q8NET6 341 aa17.17■□□□□ 0.34
PACS1-207ENST00000528935 DDX11Q96FC9 970 aa17.17■□□□□ 0.34
PACS1-207ENST00000528935 RNF41Q9H4P4 317 aaPredicted RBP17.17■□□□□ 0.34
PACS1-207ENST00000528935 FBXO40Q9UH90 709 aa17.17■□□□□ 0.34
PACS1-207ENST00000528935 DNAJC25-GNG10A0A024R161 153 aa17.16■□□□□ 0.34
PACS1-207ENST00000528935 DNM1LO00429 736 aa17.16■□□□□ 0.34
PACS1-207ENST00000528935 ZNF213O14771 459 aa17.16■□□□□ 0.34
PACS1-207ENST00000528935 TOP1P11387 765 aaKnown RBP17.16■□□□□ 0.34
PACS1-207ENST00000528935 ANP32AP39687 249 aaKnown RBP17.16■□□□□ 0.34
PACS1-207ENST00000528935 KCTD1Q719H9 257 aa17.16■□□□□ 0.34
PACS1-207ENST00000528935 C7orf61Q8IZ16 206 aa17.16■□□□□ 0.34
PACS1-207ENST00000528935 MSL3Q8N5Y2 521 aaKnown RBP17.16■□□□□ 0.34
PACS1-207ENST00000528935 ARRDC4Q8NCT1 418 aa17.16■□□□□ 0.34
PACS1-207ENST00000528935 DCAF4Q8WV16 495 aa17.16■□□□□ 0.34
PACS1-207ENST00000528935 CHMP4CQ96CF2 233 aa17.16■□□□□ 0.34
PACS1-207ENST00000528935 TBC1D10CQ8IV04 446 aa17.15■□□□□ 0.34
PACS1-207ENST00000528935 ANKRD35Q8N283 1001 aa17.15■□□□□ 0.34
PACS1-207ENST00000528935 TTC14Q96N46 770 aa17.15■□□□□ 0.34
PACS1-207ENST00000528935 TMEM47Q9BQJ4 181 aa17.15■□□□□ 0.34
PACS1-207ENST00000528935 DSCC1Q9BVC3 393 aa17.15■□□□□ 0.34
PACS1-207ENST00000528935 SENP6Q9GZR1 1112 aaPredicted RBP17.15■□□□□ 0.34
PACS1-207ENST00000528935 PRO3102Q9H379 93 aa17.15■□□□□ 0.34
PACS1-207ENST00000528935 RBM27Q9P2N5 1060 aaKnown RBP17.15■□□□□ 0.34
PACS1-207ENST00000528935 ALPK3Q96L96 1907 aa17.15■□□□□ 0.34
PACS1-207ENST00000528935 NT5C2P49902 561 aa17.14■□□□□ 0.33
PACS1-207ENST00000528935 LRRC26Q2I0M4 334 aa17.14■□□□□ 0.33
PACS1-207ENST00000528935 TTC22Q5TAA0 569 aa17.14■□□□□ 0.33
PACS1-207ENST00000528935 ANO1Q5XXA6 986 aa17.14■□□□□ 0.33
PACS1-207ENST00000528935 ZNF467Q7Z7K2 595 aaPredicted RBP17.14■□□□□ 0.33
PACS1-207ENST00000528935 ESR2Q92731 530 aa17.14■□□□□ 0.33
PACS1-207ENST00000528935 PRR12Q9ULL5 1215 aa17.14■□□□□ 0.33
PACS1-207ENST00000528935 MTMR7Q9Y216 660 aa17.14■□□□□ 0.33
PACS1-207ENST00000528935 CNPY2Q9Y2B0 182 aa17.14■□□□□ 0.33
PACS1-207ENST00000528935 ZNF536O15090 1300 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms