RNA–Protein interactions for RNA: ENST00000528488.5

C11orf49-215, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 1,623 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-215ENST00000528488 USP17L22D6RA61 530 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 USP17L17D6RBQ6 530 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 USP17L19D6RCP7 530 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 USP17L20D6RJB6 530 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 CYTH3O43739 400 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 JAK2O60674 1132 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 CDKL5O76039 1030 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 USP17L24Q0WX57 530 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 SYDE2Q5VT97 1194 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 GPAT2Q6NUI2 795 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 SAMD1Q6SPF0 538 aaPredicted RBP23.51■■□□□ 1.35
C11orf49-215ENST00000528488 CATSPERGQ6ZRH7 1159 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 FAM160B2Q86V87 743 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 SPRYD3Q8NCJ5 442 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 CHURC1Q8WUH1 139 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 LLPHQ9BRT6 129 aaKnown RBP23.51■■□□□ 1.35
C11orf49-215ENST00000528488 SPZ1Q9BXG8 430 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 VAT1LQ9HCJ6 419 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 PTPDC1A2A3K4 754 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 PLA2G6O60733 806 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 FLOT1O75955 427 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 HSP90AA1P07900 732 aaKnown RBP23.51■■□□□ 1.35
C11orf49-215ENST00000528488 ADGRF4Q8IZF3 695 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 PIBF1Q8WXW3 757 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 SLC26A6Q9BXS9 759 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 RIOX1Q9H6W3 641 aa23.51■■□□□ 1.35
C11orf49-215ENST00000528488 MANSC4A6NHS7 340 aaPredicted RBP23.5■■□□□ 1.35
C11orf49-215ENST00000528488 SMARCA1P28370 1054 aa23.5■■□□□ 1.35
C11orf49-215ENST00000528488 HTRA3P83110 453 aa23.5■■□□□ 1.35
C11orf49-215ENST00000528488 KIFC2Q96AC6 838 aa23.5■■□□□ 1.35
C11orf49-215ENST00000528488 SLF1Q9BQI6 1058 aa23.5■■□□□ 1.35
C11orf49-215ENST00000528488 PRR12Q9ULL5 1215 aa23.5■■□□□ 1.35
C11orf49-215ENST00000528488 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.5■■□□□ 1.35
C11orf49-215ENST00000528488 hCG_1642624A0A1W2PR95 340 aa23.49■■□□□ 1.35
C11orf49-215ENST00000528488 HOXA7P31268 230 aaPredicted RBP23.49■■□□□ 1.35
C11orf49-215ENST00000528488 SSRP1Q08945 709 aaKnown RBP23.49■■□□□ 1.35
C11orf49-215ENST00000528488 SMARCC2Q8TAQ2 1214 aa23.49■■□□□ 1.35
C11orf49-215ENST00000528488 DDX11Q96FC9 970 aa23.49■■□□□ 1.35
C11orf49-215ENST00000528488 INTS4Q96HW7 963 aaKnown RBP23.49■■□□□ 1.35
C11orf49-215ENST00000528488 CAPNS2Q96L46 248 aa23.49■■□□□ 1.35
C11orf49-215ENST00000528488 TESPA1A2RU30 521 aaPredicted RBP23.48■■□□□ 1.35
C11orf49-215ENST00000528488 BTBD19C9JJ37 291 aa23.48■■□□□ 1.35
C11orf49-215ENST00000528488 FMNL1O95466 1100 aaPredicted RBP23.48■■□□□ 1.35
C11orf49-215ENST00000528488 TRIM22Q8IYM9 498 aa23.48■■□□□ 1.35
C11orf49-215ENST00000528488 RNF26Q9BY78 433 aaPredicted RBP23.48■■□□□ 1.35
C11orf49-215ENST00000528488 JMJD4Q9H9V9 463 aa23.48■■□□□ 1.35
C11orf49-215ENST00000528488 PPP1R9AQ9ULJ8 1098 aa23.48■■□□□ 1.35
C11orf49-215ENST00000528488 SMC3Q9UQE7 1217 aa23.48■■□□□ 1.35
C11orf49-215ENST00000528488 V9GY48 417 aaPredicted RBP23.48■■□□□ 1.35
C11orf49-215ENST00000528488 SMCHD1A6NHR9 2005 aa23.48■■□□□ 1.35
C11orf49-215ENST00000528488 PABPC4Q13310 644 aaKnown RBP eCLIP23.48■■□□□ 1.35
C11orf49-215ENST00000528488 PRPF38AQ8NAV1 312 aaKnown RBP23.48■■□□□ 1.35
C11orf49-215ENST00000528488 PIGSQ96S52 555 aa23.48■■□□□ 1.35
C11orf49-215ENST00000528488 ZIC5Q96T25 663 aa23.48■■□□□ 1.35
C11orf49-215ENST00000528488 PTPN18Q99952 460 aa23.48■■□□□ 1.35
C11orf49-215ENST00000528488 ORC3Q9UBD5 711 aaPredicted RBP23.48■■□□□ 1.35
C11orf49-215ENST00000528488 DAXXQ9UER7 740 aaPredicted RBP23.48■■□□□ 1.35
C11orf49-215ENST00000528488 STK36Q9NRP7 1315 aa23.47■■□□□ 1.35
C11orf49-215ENST00000528488 A0A0G2JMZ2 1700 aa23.47■■□□□ 1.35
C11orf49-215ENST00000528488 PRPF3O43395 683 aaKnown RBP23.47■■□□□ 1.35
C11orf49-215ENST00000528488 SNAP25P60880 206 aa23.47■■□□□ 1.35
C11orf49-215ENST00000528488 IRX3P78415 501 aaPredicted RBP23.47■■□□□ 1.35
C11orf49-215ENST00000528488 COG2Q14746 738 aa23.47■■□□□ 1.35
C11orf49-215ENST00000528488 ANKRD23Q86SG2 305 aa23.47■■□□□ 1.35
C11orf49-215ENST00000528488 HOMER1Q86YM7 354 aa23.47■■□□□ 1.35
C11orf49-215ENST00000528488 RRP36Q96EU6 259 aaKnown RBP23.47■■□□□ 1.35
C11orf49-215ENST00000528488 ASCC2Q9H1I8 757 aaPredicted RBP23.47■■□□□ 1.35
C11orf49-215ENST00000528488 FDPSP14324 419 aaKnown RBP23.46■■□□□ 1.35
C11orf49-215ENST00000528488 DSG3P32926 999 aa23.46■■□□□ 1.35
C11orf49-215ENST00000528488 AKAP17AQ02040 695 aaKnown RBP23.46■■□□□ 1.35
C11orf49-215ENST00000528488 FAM43AQ8N2R8 423 aa23.46■■□□□ 1.35
C11orf49-215ENST00000528488 ATG4CQ96DT6 458 aa23.46■■□□□ 1.35
C11orf49-215ENST00000528488 MTMR8Q96EF0 704 aa23.46■■□□□ 1.35
C11orf49-215ENST00000528488 IPO9Q96P70 1041 aaKnown RBP23.46■■□□□ 1.35
C11orf49-215ENST00000528488 PDHXO00330 501 aa23.45■■□□□ 1.34
C11orf49-215ENST00000528488 AOC2O75106 756 aa23.45■■□□□ 1.34
C11orf49-215ENST00000528488 OSBPP22059 807 aa23.45■■□□□ 1.34
C11orf49-215ENST00000528488 GJB2P29033 226 aa23.45■■□□□ 1.34
C11orf49-215ENST00000528488 C1QTNF8P60827 252 aa23.45■■□□□ 1.34
C11orf49-215ENST00000528488 HMGN5P82970 282 aaKnown RBP23.45■■□□□ 1.34
C11orf49-215ENST00000528488 KIF23Q02241 960 aaPredicted RBP23.45■■□□□ 1.34
C11orf49-215ENST00000528488 CDC37Q16543 378 aaPredicted RBP23.45■■□□□ 1.34
C11orf49-215ENST00000528488 SLC45A1Q9Y2W3 748 aa23.45■■□□□ 1.34
C11orf49-215ENST00000528488 SPDYE16A6NNV3 312 aaPredicted RBP23.44■■□□□ 1.34
C11orf49-215ENST00000528488 NOGQ13253 232 aa23.44■■□□□ 1.34
C11orf49-215ENST00000528488 P2RX7Q99572 595 aaKnown RBP23.44■■□□□ 1.34
C11orf49-215ENST00000528488 RANBP17Q9H2T7 1088 aaKnown RBP23.44■■□□□ 1.34
C11orf49-215ENST00000528488 SEC63Q9UGP8 760 aaKnown RBP23.44■■□□□ 1.34
C11orf49-215ENST00000528488 MYPNQ86TC9 1320 aa23.44■■□□□ 1.34
C11orf49-215ENST00000528488 IGF2BP3O00425 579 aaKnown RBP eCLIP23.44■■□□□ 1.34
C11orf49-215ENST00000528488 DEXIO95424 95 aa23.44■■□□□ 1.34
C11orf49-215ENST00000528488 SREBF2Q12772 1141 aa23.44■■□□□ 1.34
C11orf49-215ENST00000528488 PKN1Q16512 942 aa23.44■■□□□ 1.34
C11orf49-215ENST00000528488 QRICH1Q2TAL8 776 aa23.44■■□□□ 1.34
C11orf49-215ENST00000528488 HOXC10Q9NYD6 342 aa23.44■■□□□ 1.34
C11orf49-215ENST00000528488 RBM27Q9P2N5 1060 aaKnown RBP23.44■■□□□ 1.34
C11orf49-215ENST00000528488 PNMA3Q9UL41 463 aa23.44■■□□□ 1.34
C11orf49-215ENST00000528488 ZBTB5O15062 677 aa23.43■■□□□ 1.34
C11orf49-215ENST00000528488 INHBEP58166 350 aa23.43■■□□□ 1.34
C11orf49-215ENST00000528488 CCDC174Q6PII3 467 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms