RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SLC38A10Q9HBR0 1119 aa16.84■□□□□ 0.29
CAPN1-212ENST00000527887 FBXO40Q9UH90 709 aa16.84■□□□□ 0.29
CAPN1-212ENST00000527887 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.84■□□□□ 0.29
CAPN1-212ENST00000527887 TSPY2A6NKD2 308 aa16.83■□□□□ 0.28
CAPN1-212ENST00000527887 PLA2G6O60733 806 aa16.83■□□□□ 0.28
CAPN1-212ENST00000527887 SNRNP48Q6IEG0 339 aaKnown RBP16.83■□□□□ 0.28
CAPN1-212ENST00000527887 FAM160B2Q86V87 743 aa16.83■□□□□ 0.28
CAPN1-212ENST00000527887 SENP6Q9GZR1 1112 aaPredicted RBP16.83■□□□□ 0.28
CAPN1-212ENST00000527887 GREB1LQ9C091 1923 aaPredicted RBP16.82■□□□□ 0.28
CAPN1-212ENST00000527887 KBTBD13C9JR72 458 aa16.82■□□□□ 0.28
CAPN1-212ENST00000527887 FOXP2O15409 715 aa16.82■□□□□ 0.28
CAPN1-212ENST00000527887 ORC4O43929 436 aa16.82■□□□□ 0.28
CAPN1-212ENST00000527887 FGRP09769 529 aa16.82■□□□□ 0.28
CAPN1-212ENST00000527887 MFAP1P55081 439 aaKnown RBP16.82■□□□□ 0.28
CAPN1-212ENST00000527887 LRRC26Q2I0M4 334 aa16.82■□□□□ 0.28
CAPN1-212ENST00000527887 FAM47AQ5JRC9 791 aa16.82■□□□□ 0.28
CAPN1-212ENST00000527887 CCDC129Q6ZRS4 1044 aa16.82■□□□□ 0.28
CAPN1-212ENST00000527887 CHST13Q8NET6 341 aa16.82■□□□□ 0.28
CAPN1-212ENST00000527887 KIFC2Q96AC6 838 aa16.82■□□□□ 0.28
CAPN1-212ENST00000527887 DDX11Q96FC9 970 aa16.82■□□□□ 0.28
CAPN1-212ENST00000527887 LNPKQ9C0E8 428 aa16.82■□□□□ 0.28
CAPN1-212ENST00000527887 OSBPL3Q9H4L5 887 aa16.82■□□□□ 0.28
CAPN1-212ENST00000527887 ZMYM6O95789 1325 aa16.81■□□□□ 0.28
CAPN1-212ENST00000527887 PGK2P07205 417 aa16.81■□□□□ 0.28
CAPN1-212ENST00000527887 PCP11498 1178 aaKnown RBP16.81■□□□□ 0.28
CAPN1-212ENST00000527887 SLC1A4P43007 532 aa16.81■□□□□ 0.28
CAPN1-212ENST00000527887 NOVP48745 357 aa16.81■□□□□ 0.28
CAPN1-212ENST00000527887 NT5C2P49902 561 aa16.81■□□□□ 0.28
CAPN1-212ENST00000527887 STAT2P52630 851 aa16.81■□□□□ 0.28
CAPN1-212ENST00000527887 ZNF467Q7Z7K2 595 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-212ENST00000527887 CHD1LQ86WJ1 897 aa16.81■□□□□ 0.28
CAPN1-212ENST00000527887 LRRC47Q8N1G4 583 aaKnown RBP16.81■□□□□ 0.28
CAPN1-212ENST00000527887 STAG1Q8WVM7 1258 aa16.81■□□□□ 0.28
CAPN1-212ENST00000527887 ZMYND8Q9ULU4 1186 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-212ENST00000527887 CNPY2Q9Y2B0 182 aa16.81■□□□□ 0.28
CAPN1-212ENST00000527887 SYNGAP1Q96PV0 1343 aa16.8■□□□□ 0.28
CAPN1-212ENST00000527887 DNAH12Q6ZR08 3092 aa16.8■□□□□ 0.28
CAPN1-212ENST00000527887 DNAJC25-GNG10A0A024R161 153 aa16.8■□□□□ 0.28
CAPN1-212ENST00000527887 TRIM6-TRIM34B2RNG4 842 aa16.8■□□□□ 0.28
CAPN1-212ENST00000527887 FGAP02671 866 aa16.8■□□□□ 0.28
CAPN1-212ENST00000527887 RARBP10826 455 aa16.8■□□□□ 0.28
CAPN1-212ENST00000527887 PRAMEF19Q5SWL8 479 aa16.8■□□□□ 0.28
CAPN1-212ENST00000527887 MAMDC4Q6UXC1 1216 aa16.8■□□□□ 0.28
CAPN1-212ENST00000527887 CPXCR1Q8N123 301 aa16.8■□□□□ 0.28
CAPN1-212ENST00000527887 STX8Q9UNK0 236 aa16.8■□□□□ 0.28
CAPN1-212ENST00000527887 RIPK3Q9Y572 518 aa16.8■□□□□ 0.28
CAPN1-212ENST00000527887 TMEM232C9JQI7 657 aa16.79■□□□□ 0.28
CAPN1-212ENST00000527887 RANBP6O60518 1105 aaKnown RBP16.79■□□□□ 0.28
CAPN1-212ENST00000527887 HSPD1P10809 573 aaKnown RBP16.79■□□□□ 0.28
CAPN1-212ENST00000527887 AKR1A1P14550 325 aa16.79■□□□□ 0.28
CAPN1-212ENST00000527887 NUCB1Q02818 461 aa16.79■□□□□ 0.28
CAPN1-212ENST00000527887 CTDSPL2Q05D32 466 aa16.79■□□□□ 0.28
CAPN1-212ENST00000527887 TKFCQ3LXA3 575 aa16.79■□□□□ 0.28
CAPN1-212ENST00000527887 VPS53Q5VIR6 699 aa16.79■□□□□ 0.28
CAPN1-212ENST00000527887 C1orf53Q5VUE5 145 aa16.79■□□□□ 0.28
CAPN1-212ENST00000527887 RCSD1Q6JBY9 416 aa16.79■□□□□ 0.28
CAPN1-212ENST00000527887 RNF180Q86T96 592 aa16.79■□□□□ 0.28
CAPN1-212ENST00000527887 FAM227BQ96M60 508 aa16.79■□□□□ 0.28
CAPN1-212ENST00000527887 RAVER2Q9HCJ3 691 aaKnown RBP16.79■□□□□ 0.28
CAPN1-212ENST00000527887 IL17RBQ9NRM6 502 aa16.79■□□□□ 0.28
CAPN1-212ENST00000527887 TCP11L1Q9NUJ3 509 aa16.79■□□□□ 0.28
CAPN1-212ENST00000527887 A0A0D9SFI3 127 aa16.78■□□□□ 0.28
CAPN1-212ENST00000527887 SYN1P17600 705 aa16.78■□□□□ 0.28
CAPN1-212ENST00000527887 MAGEA10P43363 369 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-212ENST00000527887 LRRC41Q15345 812 aa16.78■□□□□ 0.28
CAPN1-212ENST00000527887 GJC2Q5T442 439 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-212ENST00000527887 GPR153Q6NV75 609 aa16.78■□□□□ 0.28
CAPN1-212ENST00000527887 SLC39A5Q6ZMH5 540 aa16.78■□□□□ 0.28
CAPN1-212ENST00000527887 ANKRD35Q8N283 1001 aa16.78■□□□□ 0.28
CAPN1-212ENST00000527887 RILPL2Q969X0 211 aa16.78■□□□□ 0.28
CAPN1-212ENST00000527887 XPNPEP3Q9NQH7 507 aa16.78■□□□□ 0.28
CAPN1-212ENST00000527887 SZT2Q5T011 3432 aa16.77■□□□□ 0.28
CAPN1-212ENST00000527887 CCDC171Q6TFL3 1326 aa16.77■□□□□ 0.28
CAPN1-212ENST00000527887 HIP1O00291 1037 aa16.77■□□□□ 0.28
CAPN1-212ENST00000527887 ZNF865P0CJ78 1059 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-212ENST00000527887 MCCP23508 829 aa16.77■□□□□ 0.28
CAPN1-212ENST00000527887 IKQ13123 557 aaPredicted RBP16.77■□□□□ 0.28
CAPN1-212ENST00000527887 LRIT3Q3SXY7 679 aa16.77■□□□□ 0.28
CAPN1-212ENST00000527887 B4GALNT3Q6L9W6 998 aa16.77■□□□□ 0.28
CAPN1-212ENST00000527887 PLEKHM2Q8IWE5 1019 aa16.77■□□□□ 0.28
CAPN1-212ENST00000527887 DCAF4Q8WV16 495 aa16.77■□□□□ 0.28
CAPN1-212ENST00000527887 TTC14Q96N46 770 aa16.77■□□□□ 0.28
CAPN1-212ENST00000527887 PRKAG2Q9UGJ0 569 aa16.77■□□□□ 0.28
CAPN1-212ENST00000527887 FAM184BQ9ULE4 1060 aa16.77■□□□□ 0.28
CAPN1-212ENST00000527887 PARP14Q460N5 1801 aa16.76■□□□□ 0.27
CAPN1-212ENST00000527887 IGHDP01880 384 aa16.76■□□□□ 0.27
CAPN1-212ENST00000527887 SDSP20132 328 aa16.76■□□□□ 0.27
CAPN1-212ENST00000527887 ATN1P54259 1190 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-212ENST00000527887 NMIQ13287 307 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-212ENST00000527887 SNX17Q15036 470 aa16.76■□□□□ 0.27
CAPN1-212ENST00000527887 ANO1Q5XXA6 986 aa16.76■□□□□ 0.27
CAPN1-212ENST00000527887 TDHQ8IZJ6 230 aa16.76■□□□□ 0.27
CAPN1-212ENST00000527887 EXOC6Q8TAG9 804 aa16.76■□□□□ 0.27
CAPN1-212ENST00000527887 LBHD1Q9BQE6 289 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-212ENST00000527887 TSEN34Q9BSV6 310 aaKnown RBP16.76■□□□□ 0.27
CAPN1-212ENST00000527887 UBE2OQ9C0C9 1292 aaKnown RBP16.76■□□□□ 0.27
CAPN1-212ENST00000527887 ABHD16BQ9H3Z7 469 aa16.76■□□□□ 0.27
CAPN1-212ENST00000527887 RNF41Q9H4P4 317 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-212ENST00000527887 ACAD9Q9H845 621 aa16.76■□□□□ 0.27
CAPN1-212ENST00000527887 ISY1Q9ULR0 285 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms