RNA–Protein interactions for RNA: ENST00000527691.5

GPATCH4-213, Transcript of G-patch domain containing 4, humanhuman

TSL 4

Gene GPATCH4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-213ENST00000527691 SHROOM1Q2M3G4 852 aaPredicted RBP13.76□□□□□ -0.21
GPATCH4-213ENST00000527691 AXDND1Q5T1B0 1012 aaPredicted RBP13.76□□□□□ -0.21
GPATCH4-213ENST00000527691 DCAF15Q66K64 600 aa13.76□□□□□ -0.21
GPATCH4-213ENST00000527691 TYW1BQ6NUM6 668 aa13.76□□□□□ -0.21
GPATCH4-213ENST00000527691 CCDC73Q6ZRK6 1079 aa13.76□□□□□ -0.21
GPATCH4-213ENST00000527691 HEATR3Q7Z4Q2 680 aa13.76□□□□□ -0.21
GPATCH4-213ENST00000527691 TEX2Q8IWB9 1127 aa13.76□□□□□ -0.21
GPATCH4-213ENST00000527691 CCAR1Q8IX12 1150 aaKnown RBP13.76□□□□□ -0.21
GPATCH4-213ENST00000527691 ADGRF4Q8IZF3 695 aa13.76□□□□□ -0.21
GPATCH4-213ENST00000527691 MRPS27Q92552 414 aaKnown RBP13.76□□□□□ -0.21
GPATCH4-213ENST00000527691 GPKOWQ92917 476 aaPredicted RBP eCLIP13.76□□□□□ -0.21
GPATCH4-213ENST00000527691 DEFB129Q9H1M3 183 aa13.76□□□□□ -0.21
GPATCH4-213ENST00000527691 GOPCQ9HD26 462 aa13.76□□□□□ -0.21
GPATCH4-213ENST00000527691 C6orf50Q9HD87 102 aa13.76□□□□□ -0.21
GPATCH4-213ENST00000527691 GPCPD1Q9NPB8 672 aa13.76□□□□□ -0.21
GPATCH4-213ENST00000527691 ATAD5Q96QE3 1844 aa13.76□□□□□ -0.21
GPATCH4-213ENST00000527691 ZBTB5O15062 677 aa13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 CTNND1O60716 968 aaKnown RBP13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 CUTAO60888 179 aa13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 NDUFB10O96000 172 aa13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 BMP3P12645 472 aa13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 CMA1P23946 247 aa13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 DEKP35659 375 aaKnown RBP13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 NAPAP54920 295 aa13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 FAM160A1Q05DH4 1040 aa13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 RBM43Q6ZSC3 357 aaKnown RBP13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 CDAN1Q8IWY9 1227 aa13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 ZNF579Q8NAF0 562 aaKnown RBP13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 ENGASEQ8NFI3 743 aa13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 PIBF1Q8WXW3 757 aa13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 UBA5Q9GZZ9 404 aa13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 GLT8D2Q9H1C3 349 aa13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 NUP62CLQ9H1M0 184 aa13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 CPVLQ9H3G5 476 aa13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 RNF181Q9P0P0 153 aa13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 ZNF112Q9UJU3 913 aa13.75□□□□□ -0.21
GPATCH4-213ENST00000527691 A0A1W2PRG0 241 aa13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 SMCO2A6NFE2 343 aa13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 DCAF8L1A6NGE4 600 aa13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 CTAGE5O15320 804 aa13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 PTPREP23469 700 aa13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 LMOD1P29536 600 aaPredicted RBP13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 MRE11P49959 708 aa13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 TRAF1Q13077 416 aa13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 ORC2Q13416 577 aaPredicted RBP13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 SNW1Q13573 536 aaKnown RBP13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 EARS2Q5JPH6 523 aaKnown RBP13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 TTBK2Q6IQ55 1244 aa13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 KCTD1Q719H9 257 aa13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 MIGA2Q7L4E1 593 aa13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 KRT25Q7Z3Z0 450 aa13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 HOMER1Q86YM7 354 aa13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 KRI1Q8N9T8 703 aaKnown RBP13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 FSIP1Q8NA03 581 aa13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 TRPM4Q8TD43 1214 aa13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 ZNF341Q9BYN7 854 aa13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 CLSTN2Q9H4D0 955 aa13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 VAT1LQ9HCJ6 419 aa13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 ADARB2Q9NS39 739 aaKnown RBP13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 DACT1Q9NYF0 836 aa13.74□□□□□ -0.21
GPATCH4-213ENST00000527691 CCDC194A0A1B0GVG4 234 aa13.73□□□□□ -0.21
GPATCH4-213ENST00000527691 SYCE3A1L190 88 aa13.73□□□□□ -0.21
GPATCH4-213ENST00000527691 NR1I2O75469 434 aa13.73□□□□□ -0.21
GPATCH4-213ENST00000527691 TTC38Q5R3I4 469 aa13.73□□□□□ -0.21
GPATCH4-213ENST00000527691 ANGEL2Q5VTE6 544 aaKnown RBP13.73□□□□□ -0.21
GPATCH4-213ENST00000527691 C9orf131Q5VYM1 1079 aa13.73□□□□□ -0.21
GPATCH4-213ENST00000527691 FERMT2Q96AC1 680 aa13.73□□□□□ -0.21
GPATCH4-213ENST00000527691 TIGD1Q96MW7 591 aa13.73□□□□□ -0.21
GPATCH4-213ENST00000527691 VCPKMTQ9H867 229 aa13.73□□□□□ -0.21
GPATCH4-213ENST00000527691 PCDHA6Q9UN73 950 aa13.73□□□□□ -0.21
GPATCH4-213ENST00000527691 PCDHB6Q9Y5E3 794 aa13.73□□□□□ -0.21
GPATCH4-213ENST00000527691 PCDHA8Q9Y5H6 950 aa13.73□□□□□ -0.21
GPATCH4-213ENST00000527691 SRPRBQ9Y5M8 271 aaKnown RBP13.73□□□□□ -0.21
GPATCH4-213ENST00000527691 DOCK1Q14185 1865 aa13.72□□□□□ -0.21
GPATCH4-213ENST00000527691 ASTN2O75129 1339 aaPredicted RBP13.72□□□□□ -0.21
GPATCH4-213ENST00000527691 USP17L10C9JJH3 530 aa13.72□□□□□ -0.21
GPATCH4-213ENST00000527691 KINO60870 393 aaKnown RBP13.72□□□□□ -0.21
GPATCH4-213ENST00000527691 EPS15P42566 896 aa13.72□□□□□ -0.21
GPATCH4-213ENST00000527691 HIRAP54198 1017 aaPredicted RBP13.72□□□□□ -0.21
GPATCH4-213ENST00000527691 MAP3K11Q16584 847 aa13.72□□□□□ -0.21
GPATCH4-213ENST00000527691 SYDE2Q5VT97 1194 aa13.72□□□□□ -0.21
GPATCH4-213ENST00000527691 RESP18Q5W5W9 173 aa13.72□□□□□ -0.21
GPATCH4-213ENST00000527691 MCTP2Q6DN12 878 aa13.72□□□□□ -0.21
GPATCH4-213ENST00000527691 PIK3AP1Q6ZUJ8 805 aa13.72□□□□□ -0.21
GPATCH4-213ENST00000527691 GAS2L3Q86XJ1 694 aa13.72□□□□□ -0.21
GPATCH4-213ENST00000527691 FMR1NBQ8N0W7 255 aaPredicted RBP13.72□□□□□ -0.21
GPATCH4-213ENST00000527691 L3MBTL3Q96JM7 780 aaPredicted RBP13.72□□□□□ -0.21
GPATCH4-213ENST00000527691 GOLPH3LQ9H4A5 285 aa13.72□□□□□ -0.21
GPATCH4-213ENST00000527691 RIC8AQ9NPQ8 531 aa13.72□□□□□ -0.21
GPATCH4-213ENST00000527691 FBXO2Q9UK22 296 aaPredicted RBP13.72□□□□□ -0.21
GPATCH4-213ENST00000527691 HPSEQ9Y251 543 aa13.72□□□□□ -0.21
GPATCH4-213ENST00000527691 FAM205CA6NFA0 338 aa13.71□□□□□ -0.21
GPATCH4-213ENST00000527691 GRIN3BO60391 1043 aa13.71□□□□□ -0.21
GPATCH4-213ENST00000527691 DDNO94850 711 aaPredicted RBP13.71□□□□□ -0.21
GPATCH4-213ENST00000527691 MARCKSP29966 332 aaPredicted RBP13.71□□□□□ -0.21
GPATCH4-213ENST00000527691 ECE1P42892 770 aa13.71□□□□□ -0.21
GPATCH4-213ENST00000527691 ADCY7P51828 1080 aa13.71□□□□□ -0.21
GPATCH4-213ENST00000527691 MRPL12P52815 198 aaKnown RBP13.71□□□□□ -0.21
GPATCH4-213ENST00000527691 ATP2C1P98194 919 aaPredicted RBP13.71□□□□□ -0.21
GPATCH4-213ENST00000527691 SUPT20HL1Q3ZLR7 823 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms