RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 KIFC2Q96AC6 838 aa19.05■□□□□ 0.64
CTSB-213ENST00000527215 CHMP4CQ96CF2 233 aa19.05■□□□□ 0.64
CTSB-213ENST00000527215 FEM1BQ9UK73 627 aa19.05■□□□□ 0.64
CTSB-213ENST00000527215 MCM3APO60318 1980 aa19.04■□□□□ 0.64
CTSB-213ENST00000527215 SMCHD1A6NHR9 2005 aa19.04■□□□□ 0.64
CTSB-213ENST00000527215 CYP2C19P33261 490 aa19.04■□□□□ 0.64
CTSB-213ENST00000527215 CHRDL2Q6WN34 429 aa19.04■□□□□ 0.64
CTSB-213ENST00000527215 TBC1D10CQ8IV04 446 aa19.04■□□□□ 0.64
CTSB-213ENST00000527215 ANKLE1Q8NAG6 615 aa19.04■□□□□ 0.64
CTSB-213ENST00000527215 DIS3LQ8TF46 1054 aaKnown RBP19.04■□□□□ 0.64
CTSB-213ENST00000527215 MMP19Q99542 508 aa19.04■□□□□ 0.64
CTSB-213ENST00000527215 ISY1Q9ULR0 285 aaKnown RBP19.04■□□□□ 0.64
CTSB-213ENST00000527215 IGHA2P01877 340 aa19.03■□□□□ 0.64
CTSB-213ENST00000527215 COPB2P35606 906 aa19.03■□□□□ 0.64
CTSB-213ENST00000527215 NOVP48745 357 aa19.03■□□□□ 0.64
CTSB-213ENST00000527215 AKNAD1Q5T1N1 836 aa19.03■□□□□ 0.64
CTSB-213ENST00000527215 OLFML2BQ68BL8 750 aa19.03■□□□□ 0.64
CTSB-213ENST00000527215 SNRNP48Q6IEG0 339 aaKnown RBP19.03■□□□□ 0.64
CTSB-213ENST00000527215 MFSD6Q6ZSS7 791 aa19.03■□□□□ 0.64
CTSB-213ENST00000527215 STAG1Q8WVM7 1258 aa19.03■□□□□ 0.64
CTSB-213ENST00000527215 GMCL1Q96IK5 515 aa19.03■□□□□ 0.64
CTSB-213ENST00000527215 PAWRQ96IZ0 340 aaKnown RBP19.03■□□□□ 0.64
CTSB-213ENST00000527215 TEX13BQ9BXU2 312 aa19.03■□□□□ 0.64
CTSB-213ENST00000527215 SLC5A4Q9NY91 659 aa19.03■□□□□ 0.64
CTSB-213ENST00000527215 OGDHLQ9ULD0 1010 aa19.03■□□□□ 0.64
CTSB-213ENST00000527215 CTDP1Q9Y5B0 961 aaPredicted RBP19.03■□□□□ 0.64
CTSB-213ENST00000527215 TMEM232C9JQI7 657 aa19.02■□□□□ 0.64
CTSB-213ENST00000527215 ZBED4O75132 1171 aa19.02■□□□□ 0.64
CTSB-213ENST00000527215 MCCP23508 829 aa19.02■□□□□ 0.64
CTSB-213ENST00000527215 SLC1A4P43007 532 aa19.02■□□□□ 0.64
CTSB-213ENST00000527215 MNX1P50219 401 aaPredicted RBP19.02■□□□□ 0.64
CTSB-213ENST00000527215 RASGRP2Q7LDG7 609 aa19.02■□□□□ 0.64
CTSB-213ENST00000527215 CPXCR1Q8N123 301 aa19.02■□□□□ 0.64
CTSB-213ENST00000527215 IL25Q9H293 177 aa19.02■□□□□ 0.64
CTSB-213ENST00000527215 SLC38A10Q9HBR0 1119 aa19.02■□□□□ 0.64
CTSB-213ENST00000527215 RIPK3Q9Y572 518 aa19.02■□□□□ 0.64
CTSB-213ENST00000527215 NEDD4P46934 1319 aa19.01■□□□□ 0.63
CTSB-213ENST00000527215 ZNF213O14771 459 aa19.01■□□□□ 0.63
CTSB-213ENST00000527215 ATP2A1O14983 1001 aa19.01■□□□□ 0.63
CTSB-213ENST00000527215 PGK2P07205 417 aa19.01■□□□□ 0.63
CTSB-213ENST00000527215 PCP11498 1178 aaKnown RBP19.01■□□□□ 0.63
CTSB-213ENST00000527215 CNGA1P29973 690 aa19.01■□□□□ 0.63
CTSB-213ENST00000527215 SLC4A3P48751 1232 aa19.01■□□□□ 0.63
CTSB-213ENST00000527215 STAT2P52630 851 aa19.01■□□□□ 0.63
CTSB-213ENST00000527215 KCTD2Q14681 263 aa19.01■□□□□ 0.63
CTSB-213ENST00000527215 LHX8Q68G74 356 aa19.01■□□□□ 0.63
CTSB-213ENST00000527215 NECAB2Q7Z6G3 386 aa19.01■□□□□ 0.63
CTSB-213ENST00000527215 TRPV1Q8NER1 839 aa19.01■□□□□ 0.63
CTSB-213ENST00000527215 MAML3Q96JK9 1138 aa19.01■□□□□ 0.63
CTSB-213ENST00000527215 DSCC1Q9BVC3 393 aa19.01■□□□□ 0.63
CTSB-213ENST00000527215 RAVER2Q9HCJ3 691 aaKnown RBP19.01■□□□□ 0.63
CTSB-213ENST00000527215 TCP11L1Q9NUJ3 509 aa19.01■□□□□ 0.63
CTSB-213ENST00000527215 MTMR7Q9Y216 660 aa19.01■□□□□ 0.63
CTSB-213ENST00000527215 TRIOBPQ9H2D6 2365 aa19■□□□□ 0.63
CTSB-213ENST00000527215 MYH6P13533 1939 aa19■□□□□ 0.63
CTSB-213ENST00000527215 EVI5O60447 810 aa19■□□□□ 0.63
CTSB-213ENST00000527215 CYBAP13498 195 aa19■□□□□ 0.63
CTSB-213ENST00000527215 IKQ13123 557 aaPredicted RBP19■□□□□ 0.63
CTSB-213ENST00000527215 RCSD1Q6JBY9 416 aa19■□□□□ 0.63
CTSB-213ENST00000527215 KCTD1Q719H9 257 aa19■□□□□ 0.63
CTSB-213ENST00000527215 FAM160B2Q86V87 743 aa19■□□□□ 0.63
CTSB-213ENST00000527215 CHURC1Q8WUH1 139 aa19■□□□□ 0.63
CTSB-213ENST00000527215 RNF41Q9H4P4 317 aaPredicted RBP19■□□□□ 0.63
CTSB-213ENST00000527215 TMEM47Q9BQJ4 181 aa18.99■□□□□ 0.63
CTSB-213ENST00000527215 DDX20Q9UHI6 824 aaKnown RBP18.99■□□□□ 0.63
CTSB-213ENST00000527215 LCTP09848 1927 aa18.99■□□□□ 0.63
CTSB-213ENST00000527215 PLA2G6O60733 806 aa18.98■□□□□ 0.63
CTSB-213ENST00000527215 FDX1P10109 184 aa18.98■□□□□ 0.63
CTSB-213ENST00000527215 TOP1P11387 765 aaKnown RBP18.98■□□□□ 0.63
CTSB-213ENST00000527215 OAZ1P54368 228 aa18.98■□□□□ 0.63
CTSB-213ENST00000527215 ZNF792Q3KQV3 632 aa18.98■□□□□ 0.63
CTSB-213ENST00000527215 DCAF4Q8WV16 495 aa18.98■□□□□ 0.63
CTSB-213ENST00000527215 ESR2Q92731 530 aa18.98■□□□□ 0.63
CTSB-213ENST00000527215 C11orf49Q9H6J7 331 aa18.98■□□□□ 0.63
CTSB-213ENST00000527215 RAD50Q92878 1312 aa18.98■□□□□ 0.63
CTSB-213ENST00000527215 MSCO60682 206 aa18.97■□□□□ 0.63
CTSB-213ENST00000527215 IMMTQ16891 758 aaKnown RBP18.97■□□□□ 0.63
CTSB-213ENST00000527215 CCDC96Q2M329 555 aa18.97■□□□□ 0.63
CTSB-213ENST00000527215 PRAMEF19Q5SWL8 479 aa18.97■□□□□ 0.63
CTSB-213ENST00000527215 ZKSCAN3Q9BRR0 538 aa18.97■□□□□ 0.63
CTSB-213ENST00000527215 CTNNA3Q9UI47 895 aa18.97■□□□□ 0.63
CTSB-213ENST00000527215 DIS3Q9Y2L1 958 aaKnown RBP18.97■□□□□ 0.63
CTSB-213ENST00000527215 CHMLP26374 656 aa18.96■□□□□ 0.63
CTSB-213ENST00000527215 DDX11Q96FC9 970 aa18.96■□□□□ 0.63
CTSB-213ENST00000527215 TTC14Q96N46 770 aa18.96■□□□□ 0.63
CTSB-213ENST00000527215 RBM27Q9P2N5 1060 aaKnown RBP18.96■□□□□ 0.63
CTSB-213ENST00000527215 PRR12Q9ULL5 1215 aa18.96■□□□□ 0.63
CTSB-213ENST00000527215 PFASO15067 1338 aa18.96■□□□□ 0.63
CTSB-213ENST00000527215 ZNF536O15090 1300 aa18.96■□□□□ 0.63
CTSB-213ENST00000527215 A0A1W2PPC1 479 aa18.95■□□□□ 0.62
CTSB-213ENST00000527215 B4E1Z4 1266 aa18.95■□□□□ 0.62
CTSB-213ENST00000527215 SEPT4O43236 478 aa18.95■□□□□ 0.62
CTSB-213ENST00000527215 KDM4AO75164 1064 aa18.95■□□□□ 0.62
CTSB-213ENST00000527215 SNAP25P60880 206 aa18.95■□□□□ 0.62
CTSB-213ENST00000527215 TTBK2Q6IQ55 1244 aa18.95■□□□□ 0.62
CTSB-213ENST00000527215 CCDC174Q6PII3 467 aa18.95■□□□□ 0.62
CTSB-213ENST00000527215 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.95■□□□□ 0.62
CTSB-213ENST00000527215 CHST13Q8NET6 341 aa18.95■□□□□ 0.62
CTSB-213ENST00000527215 RUFY2Q8WXA3 655 aa18.95■□□□□ 0.62
CTSB-213ENST00000527215 AGBL1Q96MI9 1066 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms