RNA–Protein interactions for RNA: ENST00000526506.5

HIF3A-210, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-210ENST00000526506 STAT3P40763 770 aa17.69■□□□□ 0.42
HIF3A-210ENST00000526506 RGS2P41220 211 aa17.69■□□□□ 0.42
HIF3A-210ENST00000526506 SOX10P56693 466 aa17.69■□□□□ 0.42
HIF3A-210ENST00000526506 RIOX2Q8IUF8 465 aa17.69■□□□□ 0.42
HIF3A-210ENST00000526506 ENAHQ8N8S7 591 aaPredicted RBP17.69■□□□□ 0.42
HIF3A-210ENST00000526506 USP6NLQ92738 828 aa17.69■□□□□ 0.42
HIF3A-210ENST00000526506 TEX13BQ9BXU2 312 aa17.69■□□□□ 0.42
HIF3A-210ENST00000526506 SLC38A10Q9HBR0 1119 aa17.69■□□□□ 0.42
HIF3A-210ENST00000526506 SLC27A2O14975 620 aa17.68■□□□□ 0.42
HIF3A-210ENST00000526506 ATP2A1O14983 1001 aa17.68■□□□□ 0.42
HIF3A-210ENST00000526506 STRNO43815 780 aa17.68■□□□□ 0.42
HIF3A-210ENST00000526506 MYCP01106 439 aaPredicted RBP17.68■□□□□ 0.42
HIF3A-210ENST00000526506 PDHBP11177 359 aa17.68■□□□□ 0.42
HIF3A-210ENST00000526506 XRCC5P13010 732 aaKnown RBP17.68■□□□□ 0.42
HIF3A-210ENST00000526506 CYP2B6P20813 491 aa17.68■□□□□ 0.42
HIF3A-210ENST00000526506 COPB2P35606 906 aa17.68■□□□□ 0.42
HIF3A-210ENST00000526506 UBXN2AP68543 259 aa17.68■□□□□ 0.42
HIF3A-210ENST00000526506 MAP2K5Q13163 448 aa17.68■□□□□ 0.42
HIF3A-210ENST00000526506 GRB14Q14449 540 aa17.68■□□□□ 0.42
HIF3A-210ENST00000526506 NECTIN1Q15223 517 aa17.68■□□□□ 0.42
HIF3A-210ENST00000526506 STOX1Q6ZVD7 989 aa17.68■□□□□ 0.42
HIF3A-210ENST00000526506 CYB5R4Q7L1T6 521 aa17.68■□□□□ 0.42
HIF3A-210ENST00000526506 DOCK3Q8IZD9 2030 aa17.68■□□□□ 0.42
HIF3A-210ENST00000526506 PNMA1Q8ND90 353 aa17.68■□□□□ 0.42
HIF3A-210ENST00000526506 APBA2Q99767 749 aa17.68■□□□□ 0.42
HIF3A-210ENST00000526506 TMEM106CQ9BVX2 250 aa17.68■□□□□ 0.42
HIF3A-210ENST00000526506 KAT14Q9H8E8 782 aa17.68■□□□□ 0.42
HIF3A-210ENST00000526506 HMGCRP04035 888 aa17.67■□□□□ 0.42
HIF3A-210ENST00000526506 INHAP05111 366 aa17.67■□□□□ 0.42
HIF3A-210ENST00000526506 SNHG28P0DPA3 235 aa17.67■□□□□ 0.42
HIF3A-210ENST00000526506 OAZ1P54368 228 aa17.67■□□□□ 0.42
HIF3A-210ENST00000526506 IFIT1BQ5T764 474 aaKnown RBP17.67■□□□□ 0.42
HIF3A-210ENST00000526506 RNF20Q5VTR2 975 aa17.67■□□□□ 0.42
HIF3A-210ENST00000526506 CREB3L3Q68CJ9 461 aa17.67■□□□□ 0.42
HIF3A-210ENST00000526506 SNRNP48Q6IEG0 339 aaKnown RBP17.67■□□□□ 0.42
HIF3A-210ENST00000526506 CPXCR1Q8N123 301 aa17.67■□□□□ 0.42
HIF3A-210ENST00000526506 PLXNB2O15031 1838 aa17.67■□□□□ 0.42
HIF3A-210ENST00000526506 COL11A1P12107 1806 aaPredicted RBP17.66■□□□□ 0.42
HIF3A-210ENST00000526506 ZNF543Q08ER8 600 aa17.66■□□□□ 0.42
HIF3A-210ENST00000526506 TRMT44Q8IYL2 757 aaKnown RBP17.66■□□□□ 0.42
HIF3A-210ENST00000526506 ABRAQ8N0Z2 381 aa17.66■□□□□ 0.42
HIF3A-210ENST00000526506 RAVER2Q9HCJ3 691 aaKnown RBP17.66■□□□□ 0.42
HIF3A-210ENST00000526506 GPCPD1Q9NPB8 672 aa17.66■□□□□ 0.42
HIF3A-210ENST00000526506 PRR12Q9ULL5 1215 aa17.66■□□□□ 0.42
HIF3A-210ENST00000526506 FRMPD2Q68DX3 1309 aaPredicted RBP17.66■□□□□ 0.42
HIF3A-210ENST00000526506 ERICH2A1L162 156 aa17.65■□□□□ 0.42
HIF3A-210ENST00000526506 HOXC6P09630 235 aa17.65■□□□□ 0.42
HIF3A-210ENST00000526506 FCER1AP12319 257 aa17.65■□□□□ 0.42
HIF3A-210ENST00000526506 ZKSCAN1P17029 563 aaPredicted RBP17.65■□□□□ 0.42
HIF3A-210ENST00000526506 ADORA2AP29274 412 aa17.65■□□□□ 0.42
HIF3A-210ENST00000526506 SLC16A2P36021 539 aa17.65■□□□□ 0.42
HIF3A-210ENST00000526506 SART3Q15020 963 aaKnown RBP17.65■□□□□ 0.42
HIF3A-210ENST00000526506 MTFR1Q15390 333 aa17.65■□□□□ 0.42
HIF3A-210ENST00000526506 SEC23AQ15436 765 aa17.65■□□□□ 0.42
HIF3A-210ENST00000526506 GPATCH4Q5T3I0 446 aaKnown RBP17.65■□□□□ 0.42
HIF3A-210ENST00000526506 TTBK2Q6IQ55 1244 aa17.65■□□□□ 0.42
HIF3A-210ENST00000526506 BTNL9Q6UXG8 535 aa17.65■□□□□ 0.42
HIF3A-210ENST00000526506 MB21D2Q8IYB1 491 aaPredicted RBP17.65■□□□□ 0.42
HIF3A-210ENST00000526506 TRIB2Q92519 343 aa17.65■□□□□ 0.42
HIF3A-210ENST00000526506 ZNF236Q9UL36 1845 aa17.64■□□□□ 0.41
HIF3A-210ENST00000526506 IFIT3O14879 490 aaKnown RBP17.64■□□□□ 0.41
HIF3A-210ENST00000526506 CCL5P13501 91 aa17.64■□□□□ 0.41
HIF3A-210ENST00000526506 SLC4A3P48751 1232 aa17.64■□□□□ 0.41
HIF3A-210ENST00000526506 MLLT1Q03111 559 aaPredicted RBP17.64■□□□□ 0.41
HIF3A-210ENST00000526506 KCTD2Q14681 263 aa17.64■□□□□ 0.41
HIF3A-210ENST00000526506 CCL14Q16627 93 aa17.64■□□□□ 0.41
HIF3A-210ENST00000526506 SYDE2Q5VT97 1194 aa17.64■□□□□ 0.41
HIF3A-210ENST00000526506 DPP9Q86TI2 863 aa17.64■□□□□ 0.41
HIF3A-210ENST00000526506 MMP19Q99542 508 aa17.64■□□□□ 0.41
HIF3A-210ENST00000526506 RIPK3Q9Y572 518 aa17.64■□□□□ 0.41
HIF3A-210ENST00000526506 POTEFA5A3E0 1075 aa17.63■□□□□ 0.41
HIF3A-210ENST00000526506 REC8O95072 547 aa17.63■□□□□ 0.41
HIF3A-210ENST00000526506 RGS19P49795 217 aa17.63■□□□□ 0.41
HIF3A-210ENST00000526506 ANTXR2P58335 489 aa17.63■□□□□ 0.41
HIF3A-210ENST00000526506 CHST3Q7LGC8 479 aa17.63■□□□□ 0.41
HIF3A-210ENST00000526506 RNF208Q9H0X6 261 aa17.63■□□□□ 0.41
HIF3A-210ENST00000526506 SLC5A4Q9NY91 659 aa17.63■□□□□ 0.41
HIF3A-210ENST00000526506 FBXO40Q9UH90 709 aa17.63■□□□□ 0.41
HIF3A-210ENST00000526506 COBLO75128 1261 aa17.62■□□□□ 0.41
HIF3A-210ENST00000526506 GOLGA8HP0CJ92 632 aa17.62■□□□□ 0.41
HIF3A-210ENST00000526506 MCM5P33992 734 aa17.62■□□□□ 0.41
HIF3A-210ENST00000526506 WTAPQ15007 396 aa17.62■□□□□ 0.41
HIF3A-210ENST00000526506 ASPRV1Q53RT3 343 aa17.62■□□□□ 0.41
HIF3A-210ENST00000526506 TMEM67Q5HYA8 995 aa17.62■□□□□ 0.41
HIF3A-210ENST00000526506 CCDC174Q6PII3 467 aa17.62■□□□□ 0.41
HIF3A-210ENST00000526506 CHST13Q8NET6 341 aa17.62■□□□□ 0.41
HIF3A-210ENST00000526506 NPLOC4Q8TAT6 608 aa17.62■□□□□ 0.41
HIF3A-210ENST00000526506 MTA3Q9BTC8 594 aa17.62■□□□□ 0.41
HIF3A-210ENST00000526506 UNC93B1Q9H1C4 597 aa17.62■□□□□ 0.41
HIF3A-210ENST00000526506 RANBP17Q9H2T7 1088 aaKnown RBP17.62■□□□□ 0.41
HIF3A-210ENST00000526506 ZNF536O15090 1300 aa17.62■□□□□ 0.41
HIF3A-210ENST00000526506 RBBP6Q7Z6E9 1792 aaKnown RBP17.61■□□□□ 0.41
HIF3A-210ENST00000526506 PRC1O43663 620 aa17.61■□□□□ 0.41
HIF3A-210ENST00000526506 PARP1P09874 1014 aaKnown RBP17.61■□□□□ 0.41
HIF3A-210ENST00000526506 PRKAR2AP13861 404 aaKnown RBP17.61■□□□□ 0.41
HIF3A-210ENST00000526506 SNAP25P60880 206 aa17.61■□□□□ 0.41
HIF3A-210ENST00000526506 TRIM32Q13049 653 aa17.61■□□□□ 0.41
HIF3A-210ENST00000526506 TKFCQ3LXA3 575 aa17.61■□□□□ 0.41
HIF3A-210ENST00000526506 MFSD14CQ5VZR4 134 aa17.61■□□□□ 0.41
HIF3A-210ENST00000526506 IGDCC4Q8TDY8 1250 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms