RNA–Protein interactions for RNA: ENST00000525821.1

CTNND1-211, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-211ENST00000525821 NHSL1Q5SYE7 1610 aa9.4□□□□□ -0.9
CTNND1-211ENST00000525821 PTCH1Q13635 1447 aa9.39□□□□□ -0.91
CTNND1-211ENST00000525821 CEACAM5P06731 702 aa9.39□□□□□ -0.91
CTNND1-211ENST00000525821 LETMD1Q6P1Q0 360 aa9.39□□□□□ -0.91
CTNND1-211ENST00000525821 REC114Q7Z4M0 266 aa9.39□□□□□ -0.91
CTNND1-211ENST00000525821 FBXO27Q8NI29 283 aa9.39□□□□□ -0.91
CTNND1-211ENST00000525821 XAGE3Q8WTP9 111 aa9.39□□□□□ -0.91
CTNND1-211ENST00000525821 PRDM5Q9NQX1 630 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-211ENST00000525821 METTL5Q9NRN9 209 aaKnown RBP9.39□□□□□ -0.91
CTNND1-211ENST00000525821 ADAMTS1Q9UHI8 967 aa9.39□□□□□ -0.91
CTNND1-211ENST00000525821 CCDC9Q9Y3X0 531 aaKnown RBP9.39□□□□□ -0.91
CTNND1-211ENST00000525821 ADGRL3Q9HAR2 1447 aa9.39□□□□□ -0.91
CTNND1-211ENST00000525821 PRR36Q9H6K5 1346 aa9.38□□□□□ -0.91
CTNND1-211ENST00000525821 TLR3O15455 904 aaKnown RBP9.38□□□□□ -0.91
CTNND1-211ENST00000525821 FANCCQ00597 558 aa9.38□□□□□ -0.91
CTNND1-211ENST00000525821 IFI16Q16666 785 aaKnown RBP9.38□□□□□ -0.91
CTNND1-211ENST00000525821 TMEM201Q5SNT2 666 aa9.38□□□□□ -0.91
CTNND1-211ENST00000525821 STK11IPQ8N1F8 1099 aa9.38□□□□□ -0.91
CTNND1-211ENST00000525821 RIN3Q8TB24 985 aa9.38□□□□□ -0.91
CTNND1-211ENST00000525821 MISP3Q96FF7 219 aa9.38□□□□□ -0.91
CTNND1-211ENST00000525821 DPH2Q9BQC3 489 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-211ENST00000525821 TPX2Q9ULW0 747 aaKnown RBP9.38□□□□□ -0.91
CTNND1-211ENST00000525821 PLAGL2Q9UPG8 496 aa9.38□□□□□ -0.91
CTNND1-211ENST00000525821 POLR3KQ9Y2Y1 108 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-211ENST00000525821 OAS3Q9Y6K5 1087 aaKnown RBP9.38□□□□□ -0.91
CTNND1-211ENST00000525821 RPRD2Q5VT52 1461 aaKnown RBP9.38□□□□□ -0.91
CTNND1-211ENST00000525821 GCC2Q8IWJ2 1684 aa9.37□□□□□ -0.91
CTNND1-211ENST00000525821 GRIN3BO60391 1043 aa9.37□□□□□ -0.91
CTNND1-211ENST00000525821 ITIH2P19823 946 aa9.37□□□□□ -0.91
CTNND1-211ENST00000525821 YY1P25490 414 aa9.37□□□□□ -0.91
CTNND1-211ENST00000525821 BCL7CQ8WUZ0 217 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-211ENST00000525821 FBXL18Q96ME1 805 aa9.37□□□□□ -0.91
CTNND1-211ENST00000525821 LRRC3Q9BY71 257 aa9.37□□□□□ -0.91
CTNND1-211ENST00000525821 MAPK8IP1Q9UQF2 711 aa9.37□□□□□ -0.91
CTNND1-211ENST00000525821 SLC5A6Q9Y289 635 aa9.37□□□□□ -0.91
CTNND1-211ENST00000525821 MYOM2P54296 1465 aa9.36□□□□□ -0.91
CTNND1-211ENST00000525821 RALGAPBQ86X10 1494 aa9.36□□□□□ -0.91
CTNND1-211ENST00000525821 TMEM265A0A087WTH1 108 aa9.36□□□□□ -0.91
CTNND1-211ENST00000525821 GNAT3A8MTJ3 354 aa9.36□□□□□ -0.91
CTNND1-211ENST00000525821 UPK3BL1B0FP48 263 aa9.36□□□□□ -0.91
CTNND1-211ENST00000525821 UPK3BL2E5RIL1 263 aa9.36□□□□□ -0.91
CTNND1-211ENST00000525821 RECKO95980 971 aa9.36□□□□□ -0.91
CTNND1-211ENST00000525821 R3HDM1Q15032 1099 aaKnown RBP9.36□□□□□ -0.91
CTNND1-211ENST00000525821 CWF19L2Q2TBE0 894 aaKnown RBP9.36□□□□□ -0.91
CTNND1-211ENST00000525821 NFXL1Q6ZNB6 911 aa9.36□□□□□ -0.91
CTNND1-211ENST00000525821 UNC5CLQ8IV45 518 aa9.36□□□□□ -0.91
CTNND1-211ENST00000525821 FLCNQ8NFG4 579 aa9.36□□□□□ -0.91
CTNND1-211ENST00000525821 MRRFQ96E11 262 aaKnown RBP9.36□□□□□ -0.91
CTNND1-211ENST00000525821 TNKS2Q9H2K2 1166 aa9.36□□□□□ -0.91
CTNND1-211ENST00000525821 REV1Q9UBZ9 1251 aa9.36□□□□□ -0.91
CTNND1-211ENST00000525821 VAV3Q9UKW4 847 aa9.36□□□□□ -0.91
CTNND1-211ENST00000525821 MYO5BQ9ULV0 1848 aa9.35□□□□□ -0.91
CTNND1-211ENST00000525821 CNTNAP4Q9C0A0 1308 aa9.35□□□□□ -0.91
CTNND1-211ENST00000525821 UNC13BO14795 1591 aa9.35□□□□□ -0.91
CTNND1-211ENST00000525821 HTR3BO95264 441 aa9.35□□□□□ -0.91
CTNND1-211ENST00000525821 YARSP54577 528 aaKnown RBP9.35□□□□□ -0.91
CTNND1-211ENST00000525821 PRKCQQ04759 706 aa9.35□□□□□ -0.91
CTNND1-211ENST00000525821 BNIP3Q12983 259 aa9.35□□□□□ -0.91
CTNND1-211ENST00000525821 SFRP5Q5T4F7 317 aa9.35□□□□□ -0.91
CTNND1-211ENST00000525821 ZNF746Q6NUN9 644 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-211ENST00000525821 CDH24Q86UP0 819 aa9.35□□□□□ -0.91
CTNND1-211ENST00000525821 TP53INP2Q8IXH6 220 aa9.35□□□□□ -0.91
CTNND1-211ENST00000525821 VPS8Q8N3P4 1428 aa9.35□□□□□ -0.91
CTNND1-211ENST00000525821 FAM13CQ8NE31 585 aa9.35□□□□□ -0.91
CTNND1-211ENST00000525821 RNF34Q969K3 372 aa9.35□□□□□ -0.91
CTNND1-211ENST00000525821 ANKRD50Q9ULJ7 1429 aa9.35□□□□□ -0.91
CTNND1-211ENST00000525821 SNX11Q9Y5W9 270 aa9.35□□□□□ -0.91
CTNND1-211ENST00000525821 LRP5O75197 1615 aa9.34□□□□□ -0.91
CTNND1-211ENST00000525821 PTPN23Q9H3S7 1636 aa9.34□□□□□ -0.91
CTNND1-211ENST00000525821 SCAMP3O14828 347 aaKnown RBP9.34□□□□□ -0.91
CTNND1-211ENST00000525821 CYP7A1P22680 504 aa9.34□□□□□ -0.91
CTNND1-211ENST00000525821 USP48Q86UV5 1035 aa9.34□□□□□ -0.91
CTNND1-211ENST00000525821 HRASLS5Q96KN8 279 aa9.34□□□□□ -0.91
CTNND1-211ENST00000525821 CROCC2H7BZ55 1655 aa9.34□□□□□ -0.91
CTNND1-211ENST00000525821 XRN1Q8IZH2 1706 aaKnown RBP9.34□□□□□ -0.92
CTNND1-211ENST00000525821 CRKP46108 304 aa9.33□□□□□ -0.92
CTNND1-211ENST00000525821 FAM50AQ14320 339 aaKnown RBP9.33□□□□□ -0.92
CTNND1-211ENST00000525821 AOC3Q16853 763 aa9.33□□□□□ -0.92
CTNND1-211ENST00000525821 NKPD1Q17RQ9 610 aa9.33□□□□□ -0.92
CTNND1-211ENST00000525821 C22orf34Q6ZV56 151 aa9.33□□□□□ -0.92
CTNND1-211ENST00000525821 KRT27Q7Z3Y8 459 aa9.33□□□□□ -0.92
CTNND1-211ENST00000525821 SPRED2Q7Z698 418 aa9.33□□□□□ -0.92
CTNND1-211ENST00000525821 SPACA3Q8IXA5 215 aa9.33□□□□□ -0.92
CTNND1-211ENST00000525821 SPON2Q9BUD6 331 aa9.33□□□□□ -0.92
CTNND1-211ENST00000525821 NT5C1AQ9BXI3 368 aa9.33□□□□□ -0.92
CTNND1-211ENST00000525821 BRMS1Q9HCU9 246 aa9.33□□□□□ -0.92
CTNND1-211ENST00000525821 PAK6Q9NQU5 681 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-211ENST00000525821 UBP1Q9NZI7 540 aa9.33□□□□□ -0.92
CTNND1-211ENST00000525821 GLI3P10071 1580 aa9.33□□□□□ -0.92
CTNND1-211ENST00000525821 ZNF574Q6ZN55 896 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-211ENST00000525821 KIAA0825Q8IV33 1275 aa9.32□□□□□ -0.92
CTNND1-211ENST00000525821 SLFN12Q8IYM2 578 aa9.32□□□□□ -0.92
CTNND1-211ENST00000525821 AGBL5Q8NDL9 886 aa9.32□□□□□ -0.92
CTNND1-211ENST00000525821 CYB5D2Q8WUJ1 264 aa9.32□□□□□ -0.92
CTNND1-211ENST00000525821 COX4I2Q96KJ9 171 aa9.32□□□□□ -0.92
CTNND1-211ENST00000525821 KIAA1522Q9P206 1035 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-211ENST00000525821 CEP131Q9UPN4 1083 aa9.32□□□□□ -0.92
CTNND1-211ENST00000525821 NRXN3Q9Y4C0 1643 aa9.31□□□□□ -0.92
CTNND1-211ENST00000525821 UNCXA6NJT0 531 aa9.31□□□□□ -0.92
CTNND1-211ENST00000525821 PRR33A8MZF0 331 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms