RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 NEDD1Q8NHV4 660 aa12.4□□□□□ -0.42
RBBP4-216ENST00000525506 NBPF3Q9H094 633 aa12.4□□□□□ -0.42
RBBP4-216ENST00000525506 MROH8Q9H579 483 aa12.4□□□□□ -0.42
RBBP4-216ENST00000525506 C11orf49Q9H6J7 331 aa12.4□□□□□ -0.42
RBBP4-216ENST00000525506 RBM27Q9P2N5 1060 aaKnown RBP12.4□□□□□ -0.42
RBBP4-216ENST00000525506 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.4□□□□□ -0.42
RBBP4-216ENST00000525506 DNAH12Q6ZR08 3092 aa12.4□□□□□ -0.42
RBBP4-216ENST00000525506 ORC4O43929 436 aa12.39□□□□□ -0.43
RBBP4-216ENST00000525506 TTLL1O95922 423 aa12.39□□□□□ -0.43
RBBP4-216ENST00000525506 FGAP02671 866 aa12.39□□□□□ -0.43
RBBP4-216ENST00000525506 FCER1AP12319 257 aa12.39□□□□□ -0.43
RBBP4-216ENST00000525506 CYBAP13498 195 aa12.39□□□□□ -0.43
RBBP4-216ENST00000525506 CAPN2P17655 700 aa12.39□□□□□ -0.43
RBBP4-216ENST00000525506 STAT3P40763 770 aa12.39□□□□□ -0.43
RBBP4-216ENST00000525506 CWC27Q6UX04 472 aaKnown RBP12.39□□□□□ -0.43
RBBP4-216ENST00000525506 RIOX2Q8IUF8 465 aa12.39□□□□□ -0.43
RBBP4-216ENST00000525506 RUFY2Q8WXA3 655 aa12.39□□□□□ -0.43
RBBP4-216ENST00000525506 MKL1Q969V6 931 aa12.39□□□□□ -0.43
RBBP4-216ENST00000525506 MMP19Q99542 508 aa12.39□□□□□ -0.43
RBBP4-216ENST00000525506 SLF1Q9BQI6 1058 aa12.39□□□□□ -0.43
RBBP4-216ENST00000525506 DSCC1Q9BVC3 393 aa12.39□□□□□ -0.43
RBBP4-216ENST00000525506 ZNF214Q9UL59 606 aaPredicted RBP12.39□□□□□ -0.43
RBBP4-216ENST00000525506 RIPK3Q9Y572 518 aa12.39□□□□□ -0.43
RBBP4-216ENST00000525506 NR2E3Q9Y5X4 410 aa12.39□□□□□ -0.43
RBBP4-216ENST00000525506 SLC25A27O95847 323 aa12.38□□□□□ -0.43
RBBP4-216ENST00000525506 FXR1P51114 621 aaKnown RBP eCLIP12.38□□□□□ -0.43
RBBP4-216ENST00000525506 OLFML2BQ68BL8 750 aa12.38□□□□□ -0.43
RBBP4-216ENST00000525506 SLFN13Q68D06 897 aa12.38□□□□□ -0.43
RBBP4-216ENST00000525506 RASGRP2Q7LDG7 609 aa12.38□□□□□ -0.43
RBBP4-216ENST00000525506 CPXCR1Q8N123 301 aa12.38□□□□□ -0.43
RBBP4-216ENST00000525506 KIFC2Q96AC6 838 aa12.38□□□□□ -0.43
RBBP4-216ENST00000525506 MAML3Q96JK9 1138 aa12.38□□□□□ -0.43
RBBP4-216ENST00000525506 CCDC136Q96JN2 1154 aa12.38□□□□□ -0.43
RBBP4-216ENST00000525506 IL17RBQ9NRM6 502 aa12.38□□□□□ -0.43
RBBP4-216ENST00000525506 DDX20Q9UHI6 824 aaKnown RBP12.38□□□□□ -0.43
RBBP4-216ENST00000525506 ISY1Q9ULR0 285 aaKnown RBP12.38□□□□□ -0.43
RBBP4-216ENST00000525506 ZMYND8Q9ULU4 1186 aaPredicted RBP12.38□□□□□ -0.43
RBBP4-216ENST00000525506 MTMR7Q9Y216 660 aa12.38□□□□□ -0.43
RBBP4-216ENST00000525506 TSPY2A6NKD2 308 aa12.37□□□□□ -0.43
RBBP4-216ENST00000525506 RANBP6O60518 1105 aaKnown RBP12.37□□□□□ -0.43
RBBP4-216ENST00000525506 COL6A1P12109 1028 aa12.37□□□□□ -0.43
RBBP4-216ENST00000525506 SYN1P17600 705 aa12.37□□□□□ -0.43
RBBP4-216ENST00000525506 NOVP48745 357 aa12.37□□□□□ -0.43
RBBP4-216ENST00000525506 HAND2P61296 217 aa12.37□□□□□ -0.43
RBBP4-216ENST00000525506 LRRC26Q2I0M4 334 aa12.37□□□□□ -0.43
RBBP4-216ENST00000525506 BMP2KLQ5H9B9 411 aa12.37□□□□□ -0.43
RBBP4-216ENST00000525506 SNRNP48Q6IEG0 339 aaKnown RBP12.37□□□□□ -0.43
RBBP4-216ENST00000525506 ABRAQ8N0Z2 381 aa12.37□□□□□ -0.43
RBBP4-216ENST00000525506 PRPF38AQ8NAV1 312 aaKnown RBP12.37□□□□□ -0.43
RBBP4-216ENST00000525506 RNF41Q9H4P4 317 aaPredicted RBP12.37□□□□□ -0.43
RBBP4-216ENST00000525506 RAVER2Q9HCJ3 691 aaKnown RBP12.37□□□□□ -0.43
RBBP4-216ENST00000525506 CTNNA3Q9UI47 895 aa12.37□□□□□ -0.43
RBBP4-216ENST00000525506 TMEM232C9JQI7 657 aa12.36□□□□□ -0.43
RBBP4-216ENST00000525506 BMP3P12645 472 aa12.36□□□□□ -0.43
RBBP4-216ENST00000525506 TAL1P17542 331 aaPredicted RBP12.36□□□□□ -0.43
RBBP4-216ENST00000525506 MCCP23508 829 aa12.36□□□□□ -0.43
RBBP4-216ENST00000525506 CHMLP26374 656 aa12.36□□□□□ -0.43
RBBP4-216ENST00000525506 SNAP25P60880 206 aa12.36□□□□□ -0.43
RBBP4-216ENST00000525506 ZNF792Q3KQV3 632 aa12.36□□□□□ -0.43
RBBP4-216ENST00000525506 RRP12Q5JTH9 1297 aaKnown RBP12.36□□□□□ -0.43
RBBP4-216ENST00000525506 GJC2Q5T442 439 aaPredicted RBP12.36□□□□□ -0.43
RBBP4-216ENST00000525506 GMCL1P1Q8NEA9 526 aa12.36□□□□□ -0.43
RBBP4-216ENST00000525506 STAG1Q8WVM7 1258 aa12.36□□□□□ -0.43
RBBP4-216ENST00000525506 PRO3102Q9H379 93 aa12.36□□□□□ -0.43
RBBP4-216ENST00000525506 TOMM22Q9NS69 142 aa12.36□□□□□ -0.43
RBBP4-216ENST00000525506 SLC5A4Q9NY91 659 aa12.36□□□□□ -0.43
RBBP4-216ENST00000525506 FEM1BQ9UK73 627 aa12.36□□□□□ -0.43
RBBP4-216ENST00000525506 RANBP2P49792 3224 aaKnown RBP12.35□□□□□ -0.43
RBBP4-216ENST00000525506 ZBED4O75132 1171 aa12.35□□□□□ -0.43
RBBP4-216ENST00000525506 MYCNP04198 464 aaPredicted RBP12.35□□□□□ -0.43
RBBP4-216ENST00000525506 KCTD2Q14681 263 aa12.35□□□□□ -0.43
RBBP4-216ENST00000525506 AKNAD1Q5T1N1 836 aa12.35□□□□□ -0.43
RBBP4-216ENST00000525506 KCTD1Q719H9 257 aa12.35□□□□□ -0.43
RBBP4-216ENST00000525506 TEX13BQ9BXU2 312 aa12.35□□□□□ -0.43
RBBP4-216ENST00000525506 SENP6Q9GZR1 1112 aaPredicted RBP12.35□□□□□ -0.43
RBBP4-216ENST00000525506 SLC38A10Q9HBR0 1119 aa12.35□□□□□ -0.43
RBBP4-216ENST00000525506 TCP11L1Q9NUJ3 509 aa12.35□□□□□ -0.43
RBBP4-216ENST00000525506 STX8Q9UNK0 236 aa12.35□□□□□ -0.43
RBBP4-216ENST00000525506 CTDP1Q9Y5B0 961 aaPredicted RBP12.35□□□□□ -0.43
RBBP4-216ENST00000525506 ZNF213O14771 459 aa12.34□□□□□ -0.43
RBBP4-216ENST00000525506 SGSM2O43147 1006 aa12.34□□□□□ -0.43
RBBP4-216ENST00000525506 SEPT4O43236 478 aa12.34□□□□□ -0.43
RBBP4-216ENST00000525506 ATN1P54259 1190 aaPredicted RBP12.34□□□□□ -0.43
RBBP4-216ENST00000525506 IKQ13123 557 aaPredicted RBP12.34□□□□□ -0.43
RBBP4-216ENST00000525506 IMMTQ16891 758 aaKnown RBP12.34□□□□□ -0.43
RBBP4-216ENST00000525506 TINF2Q9BSI4 451 aa12.34□□□□□ -0.43
RBBP4-216ENST00000525506 HOMER2Q9NSB8 354 aa12.34□□□□□ -0.43
RBBP4-216ENST00000525506 ATP2A1O14983 1001 aa12.33□□□□□ -0.44
RBBP4-216ENST00000525506 MSCO60682 206 aa12.33□□□□□ -0.44
RBBP4-216ENST00000525506 COPB2P35606 906 aa12.33□□□□□ -0.44
RBBP4-216ENST00000525506 SLC1A4P43007 532 aa12.33□□□□□ -0.44
RBBP4-216ENST00000525506 STAT2P52630 851 aa12.33□□□□□ -0.44
RBBP4-216ENST00000525506 CCDC174Q6PII3 467 aa12.33□□□□□ -0.44
RBBP4-216ENST00000525506 MFSD6Q6ZSS7 791 aa12.33□□□□□ -0.44
RBBP4-216ENST00000525506 TBC1D10CQ8IV04 446 aa12.33□□□□□ -0.44
RBBP4-216ENST00000525506 LENG1Q96BZ8 264 aaPredicted RBP12.33□□□□□ -0.44
RBBP4-216ENST00000525506 DDX11Q96FC9 970 aa12.33□□□□□ -0.44
RBBP4-216ENST00000525506 GMCL1Q96IK5 515 aa12.33□□□□□ -0.44
RBBP4-216ENST00000525506 AGBL1Q96MI9 1066 aa12.33□□□□□ -0.44
RBBP4-216ENST00000525506 TTC14Q96N46 770 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms