RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 TMEM232C9JQI7 657 aa21.83■■□□□ 1.09
TSPAN4-215ENST00000525334 PRKAR2AP13861 404 aaKnown RBP21.83■■□□□ 1.09
TSPAN4-215ENST00000525334 NPLOC4Q8TAT6 608 aa21.83■■□□□ 1.09
TSPAN4-215ENST00000525334 HMX1Q9NP08 348 aaPredicted RBP21.83■■□□□ 1.09
TSPAN4-215ENST00000525334 TOP1P11387 765 aaKnown RBP21.82■■□□□ 1.08
TSPAN4-215ENST00000525334 CAPN2P17655 700 aa21.82■■□□□ 1.08
TSPAN4-215ENST00000525334 UBE2Q1Q7Z7E8 422 aa21.82■■□□□ 1.08
TSPAN4-215ENST00000525334 ABRAQ8N0Z2 381 aa21.82■■□□□ 1.08
TSPAN4-215ENST00000525334 TMEM47Q9BQJ4 181 aa21.82■■□□□ 1.08
TSPAN4-215ENST00000525334 TEX13BQ9BXU2 312 aa21.82■■□□□ 1.08
TSPAN4-215ENST00000525334 MTMR7Q9Y216 660 aa21.82■■□□□ 1.08
TSPAN4-215ENST00000525334 SGSM2O43147 1006 aa21.81■■□□□ 1.08
TSPAN4-215ENST00000525334 ZBED4O75132 1171 aa21.81■■□□□ 1.08
TSPAN4-215ENST00000525334 FCER1AP12319 257 aa21.81■■□□□ 1.08
TSPAN4-215ENST00000525334 COPB2P35606 906 aa21.81■■□□□ 1.08
TSPAN4-215ENST00000525334 STAT2P52630 851 aa21.81■■□□□ 1.08
TSPAN4-215ENST00000525334 PTH1RQ03431 593 aa21.81■■□□□ 1.08
TSPAN4-215ENST00000525334 CACNB2Q08289 660 aaPredicted RBP21.81■■□□□ 1.08
TSPAN4-215ENST00000525334 SNRNP48Q6IEG0 339 aaKnown RBP21.81■■□□□ 1.08
TSPAN4-215ENST00000525334 RCSD1Q6JBY9 416 aa21.81■■□□□ 1.08
TSPAN4-215ENST00000525334 KCTD1Q719H9 257 aa21.81■■□□□ 1.08
TSPAN4-215ENST00000525334 DPP9Q86TI2 863 aa21.81■■□□□ 1.08
TSPAN4-215ENST00000525334 SLC38A10Q9HBR0 1119 aa21.81■■□□□ 1.08
TSPAN4-215ENST00000525334 CTDP1Q9Y5B0 961 aaPredicted RBP21.81■■□□□ 1.08
TSPAN4-215ENST00000525334 ATP2A1O14983 1001 aa21.8■■□□□ 1.08
TSPAN4-215ENST00000525334 COBLO75128 1261 aa21.8■■□□□ 1.08
TSPAN4-215ENST00000525334 KDM4AO75164 1064 aa21.8■■□□□ 1.08
TSPAN4-215ENST00000525334 TFRCP02786 760 aaKnown RBP21.8■■□□□ 1.08
TSPAN4-215ENST00000525334 NT5C2P49902 561 aa21.8■■□□□ 1.08
TSPAN4-215ENST00000525334 IKQ13123 557 aaPredicted RBP21.8■■□□□ 1.08
TSPAN4-215ENST00000525334 FAM160B2Q86V87 743 aa21.8■■□□□ 1.08
TSPAN4-215ENST00000525334 CPXCR1Q8N123 301 aa21.8■■□□□ 1.08
TSPAN4-215ENST00000525334 DCAF4Q8WV16 495 aa21.8■■□□□ 1.08
TSPAN4-215ENST00000525334 CCDC136Q96JN2 1154 aa21.8■■□□□ 1.08
TSPAN4-215ENST00000525334 MMP19Q99542 508 aa21.8■■□□□ 1.08
TSPAN4-215ENST00000525334 ZKSCAN3Q9BRR0 538 aa21.8■■□□□ 1.08
TSPAN4-215ENST00000525334 CRISPLD2Q9H0B8 497 aa21.8■■□□□ 1.08
TSPAN4-215ENST00000525334 RAVER2Q9HCJ3 691 aaKnown RBP21.8■■□□□ 1.08
TSPAN4-215ENST00000525334 B4E1Z4 1266 aa21.79■■□□□ 1.08
TSPAN4-215ENST00000525334 CCDC96Q2M329 555 aa21.79■■□□□ 1.08
TSPAN4-215ENST00000525334 MFSD14CQ5VZR4 134 aa21.79■■□□□ 1.08
TSPAN4-215ENST00000525334 CHURC1Q8WUH1 139 aa21.79■■□□□ 1.08
TSPAN4-215ENST00000525334 TTC14Q96N46 770 aa21.79■■□□□ 1.08
TSPAN4-215ENST00000525334 RIPK3Q9Y572 518 aa21.79■■□□□ 1.08
TSPAN4-215ENST00000525334 PLA2G6O60733 806 aa21.78■■□□□ 1.08
TSPAN4-215ENST00000525334 IGHA2P01877 340 aa21.78■■□□□ 1.08
TSPAN4-215ENST00000525334 CCND3P30281 292 aaPredicted RBP21.78■■□□□ 1.08
TSPAN4-215ENST00000525334 SLC4A3P48751 1232 aa21.78■■□□□ 1.08
TSPAN4-215ENST00000525334 KCTD2Q14681 263 aa21.78■■□□□ 1.08
TSPAN4-215ENST00000525334 NEFLP07196 543 aa21.77■■□□□ 1.08
TSPAN4-215ENST00000525334 FDX1P10109 184 aa21.77■■□□□ 1.08
TSPAN4-215ENST00000525334 CYP2C19P33261 490 aa21.77■■□□□ 1.08
TSPAN4-215ENST00000525334 OAZ1P54368 228 aa21.77■■□□□ 1.08
TSPAN4-215ENST00000525334 BMP2KLQ5H9B9 411 aa21.77■■□□□ 1.08
TSPAN4-215ENST00000525334 OLFML2BQ68BL8 750 aa21.77■■□□□ 1.08
TSPAN4-215ENST00000525334 IQCA1Q86XH1 822 aa21.77■■□□□ 1.08
TSPAN4-215ENST00000525334 KRT23Q9C075 422 aa21.77■■□□□ 1.08
TSPAN4-215ENST00000525334 CNNM2Q9H8M5 875 aa21.77■■□□□ 1.08
TSPAN4-215ENST00000525334 SLC5A4Q9NY91 659 aa21.77■■□□□ 1.08
TSPAN4-215ENST00000525334 U3KPZ7 1027 aaPredicted RBP21.77■■□□□ 1.08
TSPAN4-215ENST00000525334 FARP2O94887 1054 aaPredicted RBP21.76■■□□□ 1.07
TSPAN4-215ENST00000525334 PGK2P07205 417 aa21.76■■□□□ 1.07
TSPAN4-215ENST00000525334 PDHBP11177 359 aa21.76■■□□□ 1.07
TSPAN4-215ENST00000525334 DGKHQ86XP1 1220 aa21.76■■□□□ 1.07
TSPAN4-215ENST00000525334 ZSCAN10Q96SZ4 725 aaPredicted RBP21.76■■□□□ 1.07
TSPAN4-215ENST00000525334 ZSWIM5Q9P217 1185 aa21.76■■□□□ 1.07
TSPAN4-215ENST00000525334 PRR12Q9ULL5 1215 aa21.76■■□□□ 1.07
TSPAN4-215ENST00000525334 ZNFX1Q9P2E3 1918 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-215ENST00000525334 FRMPD2Q68DX3 1309 aaPredicted RBP21.76■■□□□ 1.07
TSPAN4-215ENST00000525334 CYP21A2P08686 494 aa21.75■■□□□ 1.07
TSPAN4-215ENST00000525334 CCDC178Q5BJE1 867 aa21.75■■□□□ 1.07
TSPAN4-215ENST00000525334 TTBK2Q6IQ55 1244 aa21.75■■□□□ 1.07
TSPAN4-215ENST00000525334 MAML3Q96JK9 1138 aa21.75■■□□□ 1.07
TSPAN4-215ENST00000525334 ZNF536O15090 1300 aa21.75■■□□□ 1.07
TSPAN4-215ENST00000525334 SLC16A2P36021 539 aa21.74■■□□□ 1.07
TSPAN4-215ENST00000525334 SNAP25P60880 206 aa21.74■■□□□ 1.07
TSPAN4-215ENST00000525334 ZNF792Q3KQV3 632 aa21.74■■□□□ 1.07
TSPAN4-215ENST00000525334 MAP4K1Q92918 833 aa21.74■■□□□ 1.07
TSPAN4-215ENST00000525334 GPCPD1Q9NPB8 672 aa21.74■■□□□ 1.07
TSPAN4-215ENST00000525334 TNKSO95271 1327 aa21.74■■□□□ 1.07
TSPAN4-215ENST00000525334 PLXNA1Q9UIW2 1896 aa21.73■■□□□ 1.07
TSPAN4-215ENST00000525334 SNHG28P0DPA3 235 aa21.73■■□□□ 1.07
TSPAN4-215ENST00000525334 CYBAP13498 195 aa21.73■■□□□ 1.07
TSPAN4-215ENST00000525334 CCDC174Q6PII3 467 aa21.73■■□□□ 1.07
TSPAN4-215ENST00000525334 BTNL9Q6UXG8 535 aa21.73■■□□□ 1.07
TSPAN4-215ENST00000525334 ENAHQ8N8S7 591 aaPredicted RBP21.73■■□□□ 1.07
TSPAN4-215ENST00000525334 TRPV1Q8NER1 839 aa21.73■■□□□ 1.07
TSPAN4-215ENST00000525334 CHST13Q8NET6 341 aa21.73■■□□□ 1.07
TSPAN4-215ENST00000525334 ANKS1AQ92625 1134 aa21.73■■□□□ 1.07
TSPAN4-215ENST00000525334 AGBL1Q96MI9 1066 aa21.73■■□□□ 1.07
TSPAN4-215ENST00000525334 ESYT1Q9BSJ8 1104 aa21.73■■□□□ 1.07
TSPAN4-215ENST00000525334 HOMER2Q9NSB8 354 aa21.73■■□□□ 1.07
TSPAN4-215ENST00000525334 FBXO40Q9UH90 709 aa21.73■■□□□ 1.07
TSPAN4-215ENST00000525334 OGDHLQ9ULD0 1010 aa21.73■■□□□ 1.07
TSPAN4-215ENST00000525334 TAF6LQ9Y6J9 622 aa21.73■■□□□ 1.07
TSPAN4-215ENST00000525334 ZNF543Q08ER8 600 aa21.72■■□□□ 1.07
TSPAN4-215ENST00000525334 SYDE2Q5VT97 1194 aa21.72■■□□□ 1.07
TSPAN4-215ENST00000525334 LHX8Q68G74 356 aa21.72■■□□□ 1.07
TSPAN4-215ENST00000525334 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.72■■□□□ 1.075e-6■■■■■ 45.5
TSPAN4-215ENST00000525334 ANKLE1Q8NAG6 615 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms