RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 MMP19Q99542 508 aa15.17■□□□□ 0.02
TRAPPC4-205ENST00000525079 ZKSCAN3Q9BRR0 538 aa15.17■□□□□ 0.02
TRAPPC4-205ENST00000525079 RAVER2Q9HCJ3 691 aaKnown RBP15.17■□□□□ 0.02
TRAPPC4-205ENST00000525079 RIPK3Q9Y572 518 aa15.17■□□□□ 0.02
TRAPPC4-205ENST00000525079 FARP2O94887 1054 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC4-205ENST00000525079 PGK2P07205 417 aa15.16■□□□□ 0.02
TRAPPC4-205ENST00000525079 HOXC6P09630 235 aa15.16■□□□□ 0.02
TRAPPC4-205ENST00000525079 SNAP25P60880 206 aa15.16■□□□□ 0.02
TRAPPC4-205ENST00000525079 MFSD14CQ5VZR4 134 aa15.16■□□□□ 0.02
TRAPPC4-205ENST00000525079 RCSD1Q6JBY9 416 aa15.16■□□□□ 0.02
TRAPPC4-205ENST00000525079 GMCL1Q96IK5 515 aa15.16■□□□□ 0.02
TRAPPC4-205ENST00000525079 TMEM47Q9BQJ4 181 aa15.16■□□□□ 0.02
TRAPPC4-205ENST00000525079 CRISPLD2Q9H0B8 497 aa15.16■□□□□ 0.02
TRAPPC4-205ENST00000525079 RNF41Q9H4P4 317 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC4-205ENST00000525079 ZNFX1Q9P2E3 1918 aaKnown RBP15.15■□□□□ 0.02
TRAPPC4-205ENST00000525079 LAMA4Q16363 1823 aa15.15■□□□□ 0.02
TRAPPC4-205ENST00000525079 TOP1P11387 765 aaKnown RBP15.15■□□□□ 0.02
TRAPPC4-205ENST00000525079 NOVP48745 357 aa15.15■□□□□ 0.02
TRAPPC4-205ENST00000525079 PTH1RQ03431 593 aa15.15■□□□□ 0.02
TRAPPC4-205ENST00000525079 IMMTQ16891 758 aaKnown RBP15.15■□□□□ 0.02
TRAPPC4-205ENST00000525079 CCDC96Q2M329 555 aa15.15■□□□□ 0.02
TRAPPC4-205ENST00000525079 RUFY2Q8WXA3 655 aa15.15■□□□□ 0.02
TRAPPC4-205ENST00000525079 ESR2Q92731 530 aa15.15■□□□□ 0.02
TRAPPC4-205ENST00000525079 TEX13BQ9BXU2 312 aa15.15■□□□□ 0.02
TRAPPC4-205ENST00000525079 SLC38A10Q9HBR0 1119 aa15.15■□□□□ 0.02
TRAPPC4-205ENST00000525079 TCP11L1Q9NUJ3 509 aa15.15■□□□□ 0.02
TRAPPC4-205ENST00000525079 CTNNA3Q9UI47 895 aa15.15■□□□□ 0.02
TRAPPC4-205ENST00000525079 ZNF236Q9UL36 1845 aa15.15■□□□□ 0.02
TRAPPC4-205ENST00000525079 B4E1Z4 1266 aa15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 KDM4AO75164 1064 aa15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 PCP11498 1178 aaKnown RBP15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 CNGA1P29973 690 aa15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 STAT2P52630 851 aa15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 KCTD2Q14681 263 aa15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 PRPF38BQ5VTL8 546 aaKnown RBP15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 TTBK2Q6IQ55 1244 aa15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 CENPQQ7L2Z9 268 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 UBE2Q1Q7Z7E8 422 aa15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 FAM160B2Q86V87 743 aa15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 ABRAQ8N0Z2 381 aa15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 DIS3LQ8TF46 1054 aaKnown RBP15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 CHURC1Q8WUH1 139 aa15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 DPF3Q92784 378 aa15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 PAWRQ96IZ0 340 aaKnown RBP15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 GPCPD1Q9NPB8 672 aa15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 SLC5A4Q9NY91 659 aa15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 FRMPD2Q68DX3 1309 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC4-205ENST00000525079 SLC16A2P36021 539 aa15.13■□□□□ 0.01
TRAPPC4-205ENST00000525079 PRAMEF19Q5SWL8 479 aa15.13■□□□□ 0.01
TRAPPC4-205ENST00000525079 OLFML2BQ68BL8 750 aa15.13■□□□□ 0.01
TRAPPC4-205ENST00000525079 CCDC174Q6PII3 467 aa15.13■□□□□ 0.01
TRAPPC4-205ENST00000525079 TRPV1Q8NER1 839 aa15.13■□□□□ 0.01
TRAPPC4-205ENST00000525079 MAML3Q96JK9 1138 aa15.13■□□□□ 0.01
TRAPPC4-205ENST00000525079 HOMER2Q9NSB8 354 aa15.13■□□□□ 0.01
TRAPPC4-205ENST00000525079 RAD50Q92878 1312 aa15.13■□□□□ 0.01
TRAPPC4-205ENST00000525079 ATP2A1O14983 1001 aa15.12■□□□□ 0.01
TRAPPC4-205ENST00000525079 SGSM2O43147 1006 aa15.12■□□□□ 0.01
TRAPPC4-205ENST00000525079 IGHA2P01877 340 aa15.12■□□□□ 0.01
TRAPPC4-205ENST00000525079 COPB2P35606 906 aa15.12■□□□□ 0.01
TRAPPC4-205ENST00000525079 LHX8Q68G74 356 aa15.12■□□□□ 0.01
TRAPPC4-205ENST00000525079 DCAF4Q8WV16 495 aa15.12■□□□□ 0.01
TRAPPC4-205ENST00000525079 DDX11Q96FC9 970 aa15.12■□□□□ 0.01
TRAPPC4-205ENST00000525079 AGBL1Q96MI9 1066 aa15.12■□□□□ 0.01
TRAPPC4-205ENST00000525079 TTC14Q96N46 770 aa15.12■□□□□ 0.01
TRAPPC4-205ENST00000525079 ZSWIM5Q9P217 1185 aa15.12■□□□□ 0.01
TRAPPC4-205ENST00000525079 OGDHLQ9ULD0 1010 aa15.12■□□□□ 0.01
TRAPPC4-205ENST00000525079 PRR12Q9ULL5 1215 aa15.12■□□□□ 0.01
TRAPPC4-205ENST00000525079 PDE4DIPQ5VU43 2346 aa15.11■□□□□ 0.01
TRAPPC4-205ENST00000525079 PLA2G6O60733 806 aa15.11■□□□□ 0.01
TRAPPC4-205ENST00000525079 TAL1P17542 331 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC4-205ENST00000525079 MNX1P50219 401 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC4-205ENST00000525079 ZNF792Q3KQV3 632 aa15.11■□□□□ 0.01
TRAPPC4-205ENST00000525079 ANO1Q5XXA6 986 aa15.11■□□□□ 0.01
TRAPPC4-205ENST00000525079 ZNF536O15090 1300 aa15.11■□□□□ 0.01
TRAPPC4-205ENST00000525079 PLXNA1Q9UIW2 1896 aa15.1■□□□□ 0.01
TRAPPC4-205ENST00000525079 BRCA2P51587 3418 aa15.1■□□□□ 0.01
TRAPPC4-205ENST00000525079 FDX1P10109 184 aa15.1■□□□□ 0.01
TRAPPC4-205ENST00000525079 PDHBP11177 359 aa15.1■□□□□ 0.01
TRAPPC4-205ENST00000525079 CYBAP13498 195 aa15.1■□□□□ 0.01
TRAPPC4-205ENST00000525079 OAZ1P54368 228 aa15.1■□□□□ 0.01
TRAPPC4-205ENST00000525079 NECAB2Q7Z6G3 386 aa15.1■□□□□ 0.01
TRAPPC4-205ENST00000525079 IQCA1Q86XH1 822 aa15.1■□□□□ 0.01
TRAPPC4-205ENST00000525079 ANKRD35Q8N283 1001 aa15.1■□□□□ 0.01
TRAPPC4-205ENST00000525079 CCDC136Q96JN2 1154 aa15.1■□□□□ 0.01
TRAPPC4-205ENST00000525079 ZSCAN10Q96SZ4 725 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC4-205ENST00000525079 HTATIP2Q9BUP3 242 aa15.1■□□□□ 0.01
TRAPPC4-205ENST00000525079 KRT23Q9C075 422 aa15.1■□□□□ 0.01
TRAPPC4-205ENST00000525079 DDX20Q9UHI6 824 aaKnown RBP15.1■□□□□ 0.01
TRAPPC4-205ENST00000525079 CYP21A2P08686 494 aa15.09■□□□□ 0.01
TRAPPC4-205ENST00000525079 GOLGA8HP0CJ92 632 aa15.09■□□□□ 0.01
TRAPPC4-205ENST00000525079 ALAS1P13196 640 aa15.09■□□□□ 0.01
TRAPPC4-205ENST00000525079 CAPN2P17655 700 aa15.09■□□□□ 0.01
TRAPPC4-205ENST00000525079 ZNF543Q08ER8 600 aa15.09■□□□□ 0.01
TRAPPC4-205ENST00000525079 SYDE2Q5VT97 1194 aa15.09■□□□□ 0.01
TRAPPC4-205ENST00000525079 CYB5R4Q7L1T6 521 aa15.09■□□□□ 0.01
TRAPPC4-205ENST00000525079 DGKHQ86XP1 1220 aa15.09■□□□□ 0.01
TRAPPC4-205ENST00000525079 ANKLE1Q8NAG6 615 aa15.09■□□□□ 0.01
TRAPPC4-205ENST00000525079 CHST13Q8NET6 341 aa15.09■□□□□ 0.01
TRAPPC4-205ENST00000525079 TINF2Q9BSI4 451 aa15.09■□□□□ 0.01
TRAPPC4-205ENST00000525079 KAT14Q9H8E8 782 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms