RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 STK11IPQ8N1F8 1099 aa6.72□□□□□ -1.33
USP47-204ENST00000525078 MICALL1Q8N3F8 863 aa6.72□□□□□ -1.33
USP47-204ENST00000525078 CPA6Q8N4T0 437 aa6.72□□□□□ -1.33
USP47-204ENST00000525078 GSTCDQ8NEC7 633 aa6.72□□□□□ -1.33
USP47-204ENST00000525078 GPBAR1Q8TDU6 330 aa6.72□□□□□ -1.33
USP47-204ENST00000525078 GJA10Q969M2 543 aa6.72□□□□□ -1.33
USP47-204ENST00000525078 FGD4Q96M96 766 aa6.72□□□□□ -1.33
USP47-204ENST00000525078 NEUROD6Q96NK8 337 aa6.72□□□□□ -1.33
USP47-204ENST00000525078 HAUS7Q99871 368 aa6.72□□□□□ -1.33
USP47-204ENST00000525078 SELENOOQ9BVL4 669 aa6.72□□□□□ -1.33
USP47-204ENST00000525078 IGFLR1Q9H665 355 aa6.72□□□□□ -1.33
USP47-204ENST00000525078 TCF7L1Q9HCS4 588 aa6.72□□□□□ -1.33
USP47-204ENST00000525078 NLRC4Q9NPP4 1024 aa6.72□□□□□ -1.33
USP47-204ENST00000525078 CRTAC1Q9NQ79 661 aa6.72□□□□□ -1.33
USP47-204ENST00000525078 ZNF69Q9UC07 566 aa6.72□□□□□ -1.33
USP47-204ENST00000525078 PHTF1Q9UMS5 762 aa6.72□□□□□ -1.33
USP47-204ENST00000525078 MORC2Q9Y6X9 1032 aaPredicted RBP6.72□□□□□ -1.33
USP47-204ENST00000525078 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 BLACEA4D250 179 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 CHURC1-FNTBB4DL54 471 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 TCERG1O14776 1098 aaKnown RBP6.71□□□□□ -1.34
USP47-204ENST00000525078 EFSO43281 561 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 PIP5K1CO60331 668 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 PTPRAP18433 802 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 EIF2AK2P19525 551 aaKnown RBP6.71□□□□□ -1.34
USP47-204ENST00000525078 ZNF280AP59817 542 aaPredicted RBP6.71□□□□□ -1.34
USP47-204ENST00000525078 RBM10P98175 930 aaKnown RBP6.71□□□□□ -1.34
USP47-204ENST00000525078 RGL3Q3MIN7 710 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 ATP13A4Q4VNC1 1196 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 GPR158Q5T848 1215 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 EPM2AIP1Q7L775 607 aaPredicted RBP6.71□□□□□ -1.34
USP47-204ENST00000525078 VN1R5Q7Z5H4 357 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 SRLQ86TD4 932 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 PHACTR4Q8IZ21 702 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 ACRBPQ8NEB7 543 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 HPS1Q92902 700 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 PTPRN2Q92932 1015 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 SCLYQ96I15 445 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 SLC6A18Q96N87 628 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 KRTAP4-6Q9BYQ5 205 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 SLC13A1Q9BZW2 595 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 SENP2Q9HC62 589 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 APEX2Q9UBZ4 518 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 SUSD2Q9UGT4 822 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 DDX20Q9UHI6 824 aaKnown RBP6.71□□□□□ -1.34
USP47-204ENST00000525078 KLF15Q9UIH9 416 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 DMTF1Q9Y222 760 aa6.71□□□□□ -1.34
USP47-204ENST00000525078 TCRBV16S1A1N1A0A5B0 115 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 PRAMEF27A3QJZ7 478 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 IL33O95760 270 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 LTFP02788 710 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 ESRRAP11474 423 aaPredicted RBP6.7□□□□□ -1.34
USP47-204ENST00000525078 CASP2P42575 452 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 SARSP49591 514 aaKnown RBP6.7□□□□□ -1.34
USP47-204ENST00000525078 GPLD1P80108 840 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 FAPQ12884 760 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 NEUROD1Q13562 356 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 IKBKEQ14164 716 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 PCBP2Q15366 365 aaKnown RBP eCLIP6.7□□□□□ -1.34
USP47-204ENST00000525078 TMEM201Q5SNT2 666 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 C6orf118Q5T5N4 469 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 FAM186BQ8IYM0 893 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 NXPE1Q8N323 547 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 HSPBAP1Q96EW2 488 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 AHCYL2Q96HN2 611 aaKnown RBP6.7□□□□□ -1.34
USP47-204ENST00000525078 GBP3Q9H0R5 595 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 ANLNQ9NQW6 1124 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 MARK1Q9P0L2 795 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 PCDHGC4Q9Y5F7 938 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 MRFAP1Q9Y605 127 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 WASHC2AQ641Q2 1341 aa6.7□□□□□ -1.34
USP47-204ENST00000525078 DYTNA2CJ06 578 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 ZNF891A8MT65 544 aaPredicted RBP6.69□□□□□ -1.34
USP47-204ENST00000525078 F5H423 210 aaPredicted RBP6.69□□□□□ -1.34
USP47-204ENST00000525078 TBX1O43435 398 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 TIMM44O43615 452 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 GAS7O60861 476 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 FKBP9O95302 570 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 FAM163BP0C2L3 166 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 SELPP16109 830 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 VCAM1P19320 739 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 LPOP22079 712 aaPredicted RBP6.69□□□□□ -1.34
USP47-204ENST00000525078 GRK4P32298 578 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 GJA9P57773 515 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 TBC1D8BQ0IIM8 1120 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 LAMC2Q13753 1193 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 KCTD2Q14681 263 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 SLC9A5Q14940 896 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 ZCCHC8Q6NZY4 707 aaKnown RBP6.69□□□□□ -1.34
USP47-204ENST00000525078 PGM2L1Q6PCE3 622 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 MMS22LQ6ZRQ5 1243 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 FKBP9P1Q75LS8 142 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 DDX53Q86TM3 631 aaKnown RBP6.69□□□□□ -1.34
USP47-204ENST00000525078 C11orf74Q86VG3 221 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 PPFIBP1Q86W92 1011 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 SKAP1Q86WV1 359 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 CBARPQ8N350 705 aaPredicted RBP6.69□□□□□ -1.34
USP47-204ENST00000525078 C1orf131Q8NDD1 294 aaKnown RBP6.69□□□□□ -1.34
USP47-204ENST00000525078 BVESQ8NE79 360 aa6.69□□□□□ -1.34
USP47-204ENST00000525078 GPR101Q96P66 508 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms