RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 FASTKD5Q7L8L6 764 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-213ENST00000524895 RASAL3Q86YV0 1011 aa18.35■□□□□ 0.53
TSPAN4-213ENST00000524895 ADGRF4Q8IZF3 695 aa18.35■□□□□ 0.53
TSPAN4-213ENST00000524895 CHURC1Q8WUH1 139 aa18.35■□□□□ 0.53
TSPAN4-213ENST00000524895 PIBF1Q8WXW3 757 aa18.35■□□□□ 0.53
TSPAN4-213ENST00000524895 WASF1Q92558 559 aa18.35■□□□□ 0.53
TSPAN4-213ENST00000524895 RRP36Q96EU6 259 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-213ENST00000524895 CWC22Q9HCG8 908 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-213ENST00000524895 VAT1LQ9HCJ6 419 aa18.35■□□□□ 0.53
TSPAN4-213ENST00000524895 SEC63Q9UGP8 760 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-213ENST00000524895 hCG_1642624A0A1W2PR95 340 aa18.34■□□□□ 0.53
TSPAN4-213ENST00000524895 CYTH3O43739 400 aa18.34■□□□□ 0.53
TSPAN4-213ENST00000524895 PLA2G6O60733 806 aa18.34■□□□□ 0.53
TSPAN4-213ENST00000524895 FLOT1O75955 427 aa18.34■□□□□ 0.53
TSPAN4-213ENST00000524895 CETPP11597 493 aa18.34■□□□□ 0.53
TSPAN4-213ENST00000524895 SLC35G1Q2M3R5 365 aa18.34■□□□□ 0.53
TSPAN4-213ENST00000524895 SAMD1Q6SPF0 538 aaPredicted RBP18.34■□□□□ 0.53
TSPAN4-213ENST00000524895 HOMER1Q86YM7 354 aa18.34■□□□□ 0.53
TSPAN4-213ENST00000524895 KIFC2Q96AC6 838 aa18.34■□□□□ 0.53
TSPAN4-213ENST00000524895 SLF1Q9BQI6 1058 aa18.34■□□□□ 0.53
TSPAN4-213ENST00000524895 RIOX1Q9H6W3 641 aa18.34■□□□□ 0.53
TSPAN4-213ENST00000524895 V9GY48 417 aaPredicted RBP18.34■□□□□ 0.53
TSPAN4-213ENST00000524895 USP17L15C9J2P7 530 aa18.33■□□□□ 0.52
TSPAN4-213ENST00000524895 USP17L13C9JLJ4 530 aa18.33■□□□□ 0.52
TSPAN4-213ENST00000524895 USP17L11C9JVI0 530 aa18.33■□□□□ 0.52
TSPAN4-213ENST00000524895 USP17L18D6R9N7 530 aa18.33■□□□□ 0.52
TSPAN4-213ENST00000524895 USP17L22D6RA61 530 aa18.33■□□□□ 0.52
TSPAN4-213ENST00000524895 USP17L17D6RBQ6 530 aa18.33■□□□□ 0.52
TSPAN4-213ENST00000524895 USP17L19D6RCP7 530 aa18.33■□□□□ 0.52
TSPAN4-213ENST00000524895 USP17L20D6RJB6 530 aa18.33■□□□□ 0.52
TSPAN4-213ENST00000524895 FDPSP14324 419 aaKnown RBP18.33■□□□□ 0.52
TSPAN4-213ENST00000524895 APLP1P51693 650 aa18.33■□□□□ 0.52
TSPAN4-213ENST00000524895 USP17L24Q0WX57 530 aa18.33■□□□□ 0.52
TSPAN4-213ENST00000524895 TREML2Q5T2D2 321 aa18.33■□□□□ 0.52
TSPAN4-213ENST00000524895 HHIPL1Q96JK4 782 aa18.33■□□□□ 0.52
TSPAN4-213ENST00000524895 PIGSQ96S52 555 aa18.33■□□□□ 0.52
TSPAN4-213ENST00000524895 JMJD4Q9H9V9 463 aa18.33■□□□□ 0.52
TSPAN4-213ENST00000524895 FBXO28Q9NVF7 368 aa18.33■□□□□ 0.52
TSPAN4-213ENST00000524895 PRR12Q9ULL5 1215 aa18.33■□□□□ 0.52
TSPAN4-213ENST00000524895 AGTPBP1Q9UPW5 1226 aa18.33■□□□□ 0.52
TSPAN4-213ENST00000524895 CCL15-CCL14A0A0B4J2E2 113 aa18.32■□□□□ 0.52
TSPAN4-213ENST00000524895 SLC10A3P09131 477 aa18.32■□□□□ 0.52
TSPAN4-213ENST00000524895 PDCP20941 246 aa18.32■□□□□ 0.52
TSPAN4-213ENST00000524895 PABPC4Q13310 644 aaKnown RBP eCLIP18.32■□□□□ 0.52
TSPAN4-213ENST00000524895 CCL15Q16663 113 aa18.32■□□□□ 0.52
TSPAN4-213ENST00000524895 PAXIP1Q6ZW49 1069 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-213ENST00000524895 CCDC102AQ96A19 550 aa18.32■□□□□ 0.52
TSPAN4-213ENST00000524895 ALG1Q9BT22 464 aa18.32■□□□□ 0.52
TSPAN4-213ENST00000524895 CREBZFQ9NS37 354 aa18.32■□□□□ 0.52
TSPAN4-213ENST00000524895 SCG2P13521 617 aa18.31■□□□□ 0.52
TSPAN4-213ENST00000524895 FOSBP53539 338 aa18.31■□□□□ 0.52
TSPAN4-213ENST00000524895 MOGSQ13724 837 aa18.31■□□□□ 0.52
TSPAN4-213ENST00000524895 CDC37Q16543 378 aaPredicted RBP18.31■□□□□ 0.52
TSPAN4-213ENST00000524895 PFKFB3Q16875 520 aaPredicted RBP18.31■□□□□ 0.52
TSPAN4-213ENST00000524895 CATSPERGQ6ZRH7 1159 aa18.31■□□□□ 0.52
TSPAN4-213ENST00000524895 PRPF38AQ8NAV1 312 aaKnown RBP18.31■□□□□ 0.52
TSPAN4-213ENST00000524895 PPP1R9AQ9ULJ8 1098 aa18.31■□□□□ 0.52
TSPAN4-213ENST00000524895 MYH6P13533 1939 aa18.31■□□□□ 0.52
TSPAN4-213ENST00000524895 PNMA6FA0A0J9YX94 578 aa18.3■□□□□ 0.52
TSPAN4-213ENST00000524895 ZBTB5O15062 677 aa18.3■□□□□ 0.52
TSPAN4-213ENST00000524895 IRX3P78415 501 aaPredicted RBP18.3■□□□□ 0.52
TSPAN4-213ENST00000524895 TRIM29Q14134 588 aa18.3■□□□□ 0.52
TSPAN4-213ENST00000524895 PKN1Q16512 942 aa18.3■□□□□ 0.52
TSPAN4-213ENST00000524895 LARP1BQ659C4 914 aaKnown RBP18.3■□□□□ 0.52
TSPAN4-213ENST00000524895 HEATR3Q7Z4Q2 680 aa18.3■□□□□ 0.52
TSPAN4-213ENST00000524895 MTMR8Q96EF0 704 aa18.3■□□□□ 0.52
TSPAN4-213ENST00000524895 MS4A4AQ96JQ5 239 aa18.3■□□□□ 0.52
TSPAN4-213ENST00000524895 AIFM3Q96NN9 605 aa18.3■□□□□ 0.52
TSPAN4-213ENST00000524895 CTDP1Q9Y5B0 961 aaPredicted RBP18.3■□□□□ 0.52
TSPAN4-213ENST00000524895 MYPNQ86TC9 1320 aa18.29■□□□□ 0.52
TSPAN4-213ENST00000524895 PARP14Q460N5 1801 aa18.29■□□□□ 0.52
TSPAN4-213ENST00000524895 XBP1P17861 261 aa18.29■□□□□ 0.52
TSPAN4-213ENST00000524895 HOXA7P31268 230 aaPredicted RBP18.29■□□□□ 0.52
TSPAN4-213ENST00000524895 COG2Q14746 738 aa18.29■□□□□ 0.52
TSPAN4-213ENST00000524895 QRICH1Q2TAL8 776 aa18.29■□□□□ 0.52
TSPAN4-213ENST00000524895 BRI3BPQ8WY22 251 aa18.29■□□□□ 0.52
TSPAN4-213ENST00000524895 GPKOWQ92917 476 aaPredicted RBP eCLIP18.29■□□□□ 0.52
TSPAN4-213ENST00000524895 C8orf76Q96K31 380 aa18.29■□□□□ 0.52
TSPAN4-213ENST00000524895 RANBP17Q9H2T7 1088 aaKnown RBP18.29■□□□□ 0.52
TSPAN4-213ENST00000524895 MANSC4A6NHS7 340 aaPredicted RBP18.28■□□□□ 0.52
TSPAN4-213ENST00000524895 H3BQV1 296 aa18.28■□□□□ 0.52
TSPAN4-213ENST00000524895 hCG_1984214I3L0E3 225 aa18.28■□□□□ 0.52
TSPAN4-213ENST00000524895 SYT1P21579 422 aa18.28■□□□□ 0.52
TSPAN4-213ENST00000524895 OSBPP22059 807 aa18.28■□□□□ 0.52
TSPAN4-213ENST00000524895 DSG3P32926 999 aa18.28■□□□□ 0.52
TSPAN4-213ENST00000524895 SNAP25P60880 206 aa18.28■□□□□ 0.52
TSPAN4-213ENST00000524895 GRM1Q13255 1194 aa18.28■□□□□ 0.52
TSPAN4-213ENST00000524895 IFFO2Q5TF58 517 aa18.28■□□□□ 0.52
TSPAN4-213ENST00000524895 WWC2Q6AWC2 1192 aa18.28■□□□□ 0.52
TSPAN4-213ENST00000524895 GPAT2Q6NUI2 795 aa18.28■□□□□ 0.52
TSPAN4-213ENST00000524895 CCDC174Q6PII3 467 aa18.28■□□□□ 0.52
TSPAN4-213ENST00000524895 ZNF713Q8N859 430 aaPredicted RBP18.28■□□□□ 0.52
TSPAN4-213ENST00000524895 ATG4CQ96DT6 458 aa18.28■□□□□ 0.52
TSPAN4-213ENST00000524895 HOXC10Q9NYD6 342 aa18.28■□□□□ 0.52
TSPAN4-213ENST00000524895 PNMA3Q9UL41 463 aa18.28■□□□□ 0.52
TSPAN4-213ENST00000524895 VPS37CA5D8V6 355 aaPredicted RBP18.27■□□□□ 0.52
TSPAN4-213ENST00000524895 FAM155AB1AL88 458 aaPredicted RBP18.27■□□□□ 0.52
TSPAN4-213ENST00000524895 ZBED4O75132 1171 aa18.27■□□□□ 0.52
TSPAN4-213ENST00000524895 FDX1P10109 184 aa18.27■□□□□ 0.52
TSPAN4-213ENST00000524895 DDIT3P35638 169 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms