RNA–Protein interactions for RNA: ENST00000524568.1

NDUFS3-202, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 733 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-202ENST00000524568 CHD1LQ86WJ1 897 aa23.19■■□□□ 1.3
NDUFS3-202ENST00000524568 KIFC2Q96AC6 838 aa23.19■■□□□ 1.3
NDUFS3-202ENST00000524568 RWDD1Q9H446 243 aaPredicted RBP23.19■■□□□ 1.3
NDUFS3-202ENST00000524568 HELLSQ9NRZ9 838 aa23.19■■□□□ 1.3
NDUFS3-202ENST00000524568 AAMPQ13685 434 aa23.18■■□□□ 1.3
NDUFS3-202ENST00000524568 SLFN13Q68D06 897 aa23.18■■□□□ 1.3
NDUFS3-202ENST00000524568 SNRNP48Q6IEG0 339 aaKnown RBP23.18■■□□□ 1.3
NDUFS3-202ENST00000524568 GMCL1P1Q8NEA9 526 aa23.18■■□□□ 1.3
NDUFS3-202ENST00000524568 SUPT16HQ9Y5B9 1047 aaKnown RBP23.18■■□□□ 1.3
NDUFS3-202ENST00000524568 TRIM6-TRIM34B2RNG4 842 aa23.17■■□□□ 1.3
NDUFS3-202ENST00000524568 SLC3A2P08195 630 aaKnown RBP23.17■■□□□ 1.3
NDUFS3-202ENST00000524568 TAL1P17542 331 aaPredicted RBP23.17■■□□□ 1.3
NDUFS3-202ENST00000524568 SLC4A3P48751 1232 aa23.17■■□□□ 1.3
NDUFS3-202ENST00000524568 ZNF792Q3KQV3 632 aa23.17■■□□□ 1.3
NDUFS3-202ENST00000524568 MCMDC2Q4G0Z9 681 aa23.17■■□□□ 1.3
NDUFS3-202ENST00000524568 CPXCR1Q8N123 301 aa23.17■■□□□ 1.3
NDUFS3-202ENST00000524568 RILPL2Q969X0 211 aa23.17■■□□□ 1.3
NDUFS3-202ENST00000524568 TEX13BQ9BXU2 312 aa23.17■■□□□ 1.3
NDUFS3-202ENST00000524568 RAVER2Q9HCJ3 691 aaKnown RBP23.17■■□□□ 1.3
NDUFS3-202ENST00000524568 ANAPC4Q9UJX5 808 aa23.17■■□□□ 1.3
NDUFS3-202ENST00000524568 LCTP09848 1927 aa23.16■■□□□ 1.3
NDUFS3-202ENST00000524568 FGAP02671 866 aa23.16■■□□□ 1.3
NDUFS3-202ENST00000524568 ALX1Q15699 326 aa23.16■■□□□ 1.3
NDUFS3-202ENST00000524568 PRPF38AQ8NAV1 312 aaKnown RBP23.16■■□□□ 1.3
NDUFS3-202ENST00000524568 TSPY2A6NKD2 308 aa23.15■■□□□ 1.3
NDUFS3-202ENST00000524568 HSPD1P10809 573 aaKnown RBP23.15■■□□□ 1.3
NDUFS3-202ENST00000524568 BMP3P12645 472 aa23.15■■□□□ 1.3
NDUFS3-202ENST00000524568 HAND2P61296 217 aa23.15■■□□□ 1.3
NDUFS3-202ENST00000524568 IRX6P78412 446 aaPredicted RBP23.15■■□□□ 1.3
NDUFS3-202ENST00000524568 KCTD2Q14681 263 aa23.15■■□□□ 1.3
NDUFS3-202ENST00000524568 GJC2Q5T442 439 aaPredicted RBP23.15■■□□□ 1.3
NDUFS3-202ENST00000524568 SLC38A10Q9HBR0 1119 aa23.15■■□□□ 1.3
NDUFS3-202ENST00000524568 CCDC171Q6TFL3 1326 aa23.14■■□□□ 1.3
NDUFS3-202ENST00000524568 SEPT4O43236 478 aa23.14■■□□□ 1.29
NDUFS3-202ENST00000524568 RANBP6O60518 1105 aaKnown RBP23.14■■□□□ 1.29
NDUFS3-202ENST00000524568 LENG1Q96BZ8 264 aaPredicted RBP23.14■■□□□ 1.29
NDUFS3-202ENST00000524568 SENP6Q9GZR1 1112 aaPredicted RBP23.14■■□□□ 1.29
NDUFS3-202ENST00000524568 FEM1BQ9UK73 627 aa23.14■■□□□ 1.29
NDUFS3-202ENST00000524568 SYNPO2Q9UMS6 1093 aa23.14■■□□□ 1.29
NDUFS3-202ENST00000524568 STX8Q9UNK0 236 aa23.14■■□□□ 1.29
NDUFS3-202ENST00000524568 LTBP2Q14767 1821 aa23.13■■□□□ 1.29
NDUFS3-202ENST00000524568 TMEM232C9JQI7 657 aa23.13■■□□□ 1.29
NDUFS3-202ENST00000524568 ATP2A1O14983 1001 aa23.13■■□□□ 1.29
NDUFS3-202ENST00000524568 ORC4O43929 436 aa23.13■■□□□ 1.29
NDUFS3-202ENST00000524568 MSCO60682 206 aa23.13■■□□□ 1.29
NDUFS3-202ENST00000524568 FGRP09769 529 aa23.13■■□□□ 1.29
NDUFS3-202ENST00000524568 SDSP20132 328 aa23.13■■□□□ 1.29
NDUFS3-202ENST00000524568 MCCP23508 829 aa23.13■■□□□ 1.29
NDUFS3-202ENST00000524568 ATN1P54259 1190 aaPredicted RBP23.13■■□□□ 1.29
NDUFS3-202ENST00000524568 SNAP25P60880 206 aa23.13■■□□□ 1.29
NDUFS3-202ENST00000524568 KCTD1Q719H9 257 aa23.13■■□□□ 1.29
NDUFS3-202ENST00000524568 FGD4Q96M96 766 aa23.13■■□□□ 1.29
NDUFS3-202ENST00000524568 TINF2Q9BSI4 451 aa23.13■■□□□ 1.29
NDUFS3-202ENST00000524568 OSBPL3Q9H4L5 887 aa23.13■■□□□ 1.29
NDUFS3-202ENST00000524568 SLC5A4Q9NY91 659 aa23.13■■□□□ 1.29
NDUFS3-202ENST00000524568 ISY1Q9ULR0 285 aaKnown RBP23.13■■□□□ 1.29
NDUFS3-202ENST00000524568 MTMR7Q9Y216 660 aa23.13■■□□□ 1.29
NDUFS3-202ENST00000524568 DNAJC25-GNG10A0A024R161 153 aa23.12■■□□□ 1.29
NDUFS3-202ENST00000524568 DNM1LO00429 736 aa23.12■■□□□ 1.29
NDUFS3-202ENST00000524568 RRP12Q5JTH9 1297 aaKnown RBP23.12■■□□□ 1.29
NDUFS3-202ENST00000524568 TBC1D10CQ8IV04 446 aa23.12■■□□□ 1.29
NDUFS3-202ENST00000524568 GMCL1Q96IK5 515 aa23.12■■□□□ 1.29
NDUFS3-202ENST00000524568 GDF15Q99988 308 aa23.12■■□□□ 1.29
NDUFS3-202ENST00000524568 ZNF536O15090 1300 aa23.11■■□□□ 1.29
NDUFS3-202ENST00000524568 LRRC37A2A6NM11 1700 aa23.11■■□□□ 1.29
NDUFS3-202ENST00000524568 ZBED4O75132 1171 aa23.11■■□□□ 1.29
NDUFS3-202ENST00000524568 MYCNP04198 464 aaPredicted RBP23.11■■□□□ 1.29
NDUFS3-202ENST00000524568 PDE4AP27815 886 aa23.11■■□□□ 1.29
NDUFS3-202ENST00000524568 COPB2P35606 906 aa23.11■■□□□ 1.29
NDUFS3-202ENST00000524568 MAGEA10P43363 369 aaPredicted RBP23.11■■□□□ 1.29
NDUFS3-202ENST00000524568 NOVP48745 357 aa23.11■■□□□ 1.29
NDUFS3-202ENST00000524568 HOMER2Q9NSB8 354 aa23.11■■□□□ 1.29
NDUFS3-202ENST00000524568 ZMYM6O95789 1325 aa23.1■■□□□ 1.29
NDUFS3-202ENST00000524568 SOX1O00570 391 aaPredicted RBP23.1■■□□□ 1.29
NDUFS3-202ENST00000524568 ZNF865P0CJ78 1059 aaPredicted RBP23.1■■□□□ 1.29
NDUFS3-202ENST00000524568 SLC1A4P43007 532 aa23.1■■□□□ 1.29
NDUFS3-202ENST00000524568 AGBL1Q96MI9 1066 aa23.1■■□□□ 1.29
NDUFS3-202ENST00000524568 TOMM22Q9NS69 142 aa23.1■■□□□ 1.29
NDUFS3-202ENST00000524568 DIS3Q9Y2L1 958 aaKnown RBP23.1■■□□□ 1.29
NDUFS3-202ENST00000524568 SNAI1O95863 264 aaPredicted RBP23.09■■□□□ 1.29
NDUFS3-202ENST00000524568 STAT2P52630 851 aa23.09■■□□□ 1.29
NDUFS3-202ENST00000524568 IL25Q9H293 177 aa23.09■■□□□ 1.29
NDUFS3-202ENST00000524568 NEDD4P46934 1319 aa23.08■■□□□ 1.29
NDUFS3-202ENST00000524568 LRRC41Q15345 812 aa23.08■■□□□ 1.29
NDUFS3-202ENST00000524568 TTBK2Q6IQ55 1244 aa23.08■■□□□ 1.29
NDUFS3-202ENST00000524568 CWC27Q6UX04 472 aaKnown RBP23.08■■□□□ 1.29
NDUFS3-202ENST00000524568 STAG1Q8WVM7 1258 aa23.08■■□□□ 1.29
NDUFS3-202ENST00000524568 CTDP1Q9Y5B0 961 aaPredicted RBP23.08■■□□□ 1.29
NDUFS3-202ENST00000524568 PGK1P00558 417 aa23.07■■□□□ 1.28
NDUFS3-202ENST00000524568 IKQ13123 557 aaPredicted RBP23.07■■□□□ 1.28
NDUFS3-202ENST00000524568 CCDC174Q6PII3 467 aa23.07■■□□□ 1.28
NDUFS3-202ENST00000524568 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.07■■□□□ 1.28
NDUFS3-202ENST00000524568 FERMT2Q96AC1 680 aa23.07■■□□□ 1.28
NDUFS3-202ENST00000524568 DDX11Q96FC9 970 aa23.07■■□□□ 1.28
NDUFS3-202ENST00000524568 TMEM47Q9BQJ4 181 aa23.07■■□□□ 1.28
NDUFS3-202ENST00000524568 PRR12Q9ULL5 1215 aa23.07■■□□□ 1.28
NDUFS3-202ENST00000524568 DDX49Q9Y6V7 483 aaKnown RBP23.07■■□□□ 1.28
NDUFS3-202ENST00000524568 LAMA2P24043 3122 aaKnown RBP23.07■■□□□ 1.28
NDUFS3-202ENST00000524568 ADCY6O43306 1168 aa23.06■■□□□ 1.28
NDUFS3-202ENST00000524568 OAZ1P54368 228 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms