RNA–Protein interactions for RNA: ENST00000524177.5

CSMD1-214, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-214ENST00000524177 DNAJC6O75061 913 aa4.97□□□□□ -1.61
CSMD1-214ENST00000524177 CST3P01034 146 aaPredicted RBP4.97□□□□□ -1.61
CSMD1-214ENST00000524177 GYS2P54840 703 aa4.97□□□□□ -1.61
CSMD1-214ENST00000524177 AOC3Q16853 763 aa4.97□□□□□ -1.61
CSMD1-214ENST00000524177 TMEM67Q5HYA8 995 aa4.97□□□□□ -1.61
CSMD1-214ENST00000524177 ZSWIM2Q8NEG5 633 aa4.97□□□□□ -1.61
CSMD1-214ENST00000524177 CCDC74BQ96LY2 380 aa4.97□□□□□ -1.61
CSMD1-214ENST00000524177 FAM86C1Q9NVL1 165 aa4.97□□□□□ -1.61
CSMD1-214ENST00000524177 hCG_2014768A0A024R1R8 64 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 CBFA2T2O43439 604 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 ASMTLO95671 621 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 MLANAQ16655 118 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 IFI16Q16666 785 aaKnown RBP4.96□□□□□ -1.62
CSMD1-214ENST00000524177 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 BBS9Q3SYG4 887 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 AXDND1Q5T1B0 1012 aaPredicted RBP4.96□□□□□ -1.62
CSMD1-214ENST00000524177 FOXB2Q5VYV0 432 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 ARHGAP27Q6ZUM4 889 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 ZNF513Q8N8E2 541 aaPredicted RBP4.96□□□□□ -1.62
CSMD1-214ENST00000524177 ZBTB38Q8NAP3 1195 aaPredicted RBP4.96□□□□□ -1.62
CSMD1-214ENST00000524177 KCT2Q8NC54 265 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 PPP1R13LQ8WUF5 828 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 HRASLS5Q96KN8 279 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 HAUS7Q99871 368 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 KLHL25Q9H0H3 589 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 SLKQ9H2G2 1235 aaPredicted RBP4.96□□□□□ -1.62
CSMD1-214ENST00000524177 PIDD1Q9HB75 910 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 SPC25Q9HBM1 224 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 PCDH12Q9NPG4 1184 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 PRDM7Q9NQW5 492 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 ARHGEF4Q9NR80 690 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 APEX2Q9UBZ4 518 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 CD2APQ9Y5K6 639 aa4.96□□□□□ -1.62
CSMD1-214ENST00000524177 IQCA1LA6NCM1 817 aa4.95□□□□□ -1.62
CSMD1-214ENST00000524177 PPP1R12AO14974 1030 aaPredicted RBP4.95□□□□□ -1.62
CSMD1-214ENST00000524177 CLEC3AO75596 197 aa4.95□□□□□ -1.62
CSMD1-214ENST00000524177 LEFTY1O75610 366 aa4.95□□□□□ -1.62
CSMD1-214ENST00000524177 TP53P04637 393 aaPredicted RBP4.95□□□□□ -1.62
CSMD1-214ENST00000524177 CEACAM5P06731 702 aa4.95□□□□□ -1.62
CSMD1-214ENST00000524177 EPHX1P07099 455 aa4.95□□□□□ -1.62
CSMD1-214ENST00000524177 CFPP27918 469 aa4.95□□□□□ -1.62
CSMD1-214ENST00000524177 ZNF143P52747 638 aaPredicted RBP4.95□□□□□ -1.62
CSMD1-214ENST00000524177 TCEA2Q15560 299 aa4.95□□□□□ -1.62
CSMD1-214ENST00000524177 LONRF2Q1L5Z9 754 aa4.95□□□□□ -1.62
CSMD1-214ENST00000524177 DALRD3Q5D0E6 543 aaKnown RBP4.95□□□□□ -1.62
CSMD1-214ENST00000524177 DCAF15Q66K64 600 aa4.95□□□□□ -1.62
CSMD1-214ENST00000524177 ARMCX6Q7L4S7 300 aa4.95□□□□□ -1.62
CSMD1-214ENST00000524177 CILP2Q8IUL8 1156 aa4.95□□□□□ -1.62
CSMD1-214ENST00000524177 RPUSD2Q8IZ73 545 aaKnown RBP4.95□□□□□ -1.62
CSMD1-214ENST00000524177 LRRC47Q8N1G4 583 aaKnown RBP4.95□□□□□ -1.62
CSMD1-214ENST00000524177 SYNPOQ8N3V7 929 aa4.95□□□□□ -1.62
CSMD1-214ENST00000524177 DNAJB8Q8NHS0 232 aa4.95□□□□□ -1.62
CSMD1-214ENST00000524177 ZCRB1Q8TBF4 217 aaKnown RBP4.95□□□□□ -1.62
CSMD1-214ENST00000524177 SGSM3Q96HU1 749 aa4.95□□□□□ -1.62
CSMD1-214ENST00000524177 ZNF512BQ96KM6 892 aaPredicted RBP4.95□□□□□ -1.62
CSMD1-214ENST00000524177 EXOC2Q96KP1 924 aa4.95□□□□□ -1.62
CSMD1-214ENST00000524177 DHRS1Q96LJ7 313 aa4.95□□□□□ -1.62
CSMD1-214ENST00000524177 FOXQ1Q9C009 403 aa4.95□□□□□ -1.62
CSMD1-214ENST00000524177 NOP58Q9Y2X3 529 aaKnown RBP4.95□□□□□ -1.62
CSMD1-214ENST00000524177 A0A1W2PQU0 124 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 ANKRD34BA5PLL1 514 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 ZNF503-AS2A6NEH8 195 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 SHOXO15266 292 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 RNGTTO60942 597 aaKnown RBP4.94□□□□□ -1.62
CSMD1-214ENST00000524177 ITIH2P19823 946 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 GBP1P32455 592 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 RAP1GAPP47736 663 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 MASP1P48740 699 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 OXCT1P55809 520 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 IGBP1P78318 339 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 ANGEL2Q5VTE6 544 aaKnown RBP4.94□□□□□ -1.62
CSMD1-214ENST00000524177 CDC37L1Q7L3B6 337 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 ZNF227Q86WZ6 799 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 ZSWIM9Q86XI8 627 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 SMYD4Q8IYR2 804 aaPredicted RBP4.94□□□□□ -1.62
CSMD1-214ENST00000524177 FLAD1Q8NFF5 587 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 BHLHE22Q8NFJ8 381 aaPredicted RBP4.94□□□□□ -1.62
CSMD1-214ENST00000524177 XAGE3Q8WTP9 111 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 SMARCC1Q92922 1105 aaPredicted RBP4.94□□□□□ -1.62
CSMD1-214ENST00000524177 KISS1RQ969F8 398 aaPredicted RBP4.94□□□□□ -1.62
CSMD1-214ENST00000524177 TOX2Q96NM4 488 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 SLC26A8Q96RN1 970 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 LGR4Q9BXB1 951 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.94□□□□□ -1.62
CSMD1-214ENST00000524177 PLAGL2Q9UPG8 496 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 PLAAQ9Y263 795 aa4.94□□□□□ -1.62
CSMD1-214ENST00000524177 RAB11FIP3O75154 756 aa4.93□□□□□ -1.62
CSMD1-214ENST00000524177 LRIG2O94898 1065 aa4.93□□□□□ -1.62
CSMD1-214ENST00000524177 CAPNS1P04632 268 aa4.93□□□□□ -1.62
CSMD1-214ENST00000524177 VIL1P09327 827 aaKnown RBP4.93□□□□□ -1.62
CSMD1-214ENST00000524177 IBSPP21815 317 aaPredicted RBP4.93□□□□□ -1.62
CSMD1-214ENST00000524177 AMPD3Q01432 767 aa4.93□□□□□ -1.62
CSMD1-214ENST00000524177 CBX2Q14781 532 aaPredicted RBP4.93□□□□□ -1.62
CSMD1-214ENST00000524177 KCNMB1Q16558 191 aa4.93□□□□□ -1.62
CSMD1-214ENST00000524177 C21orf62-AS1Q17RA5 79 aa4.93□□□□□ -1.62
CSMD1-214ENST00000524177 SV2CQ496J9 727 aa4.93□□□□□ -1.62
CSMD1-214ENST00000524177 LCE5AQ5TCM9 118 aa4.93□□□□□ -1.62
CSMD1-214ENST00000524177 YOD1Q5VVQ6 348 aaPredicted RBP4.93□□□□□ -1.62
CSMD1-214ENST00000524177 SLC23A3Q6PIS1 610 aa4.93□□□□□ -1.62
CSMD1-214ENST00000524177 C1QL4Q86Z23 238 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms