RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	MTIF3	Q9H2K0	278 aa	Known RBP	13.1	□□□□□ -0.31
SORBS3-222	ENST00000524057	FAM184B	Q9ULE4	1060 aa		13.1	□□□□□ -0.31
SORBS3-222	ENST00000524057	CNPY2	Q9Y2B0	182 aa		13.1	□□□□□ -0.31
SORBS3-222	ENST00000524057	ROBO3	Q96MS0	1386 aa		13.09	□□□□□ -0.31
SORBS3-222	ENST00000524057	FLOT1	O75955	427 aa		13.09	□□□□□ -0.31
SORBS3-222	ENST00000524057	SLC25A27	O95847	323 aa		13.09	□□□□□ -0.31
SORBS3-222	ENST00000524057	SNAI1	O95863	264 aa	Predicted RBP	13.09	□□□□□ -0.31
SORBS3-222	ENST00000524057	CD4	P01730	458 aa		13.09	□□□□□ -0.31
SORBS3-222	ENST00000524057	USP5	P45974	858 aa		13.09	□□□□□ -0.31
SORBS3-222	ENST00000524057	KRT40	Q6A162	431 aa		13.09	□□□□□ -0.31
SORBS3-222	ENST00000524057	TTC6	Q86TZ1	520 aa		13.09	□□□□□ -0.31
SORBS3-222	ENST00000524057	CDK5RAP2	Q96SN8	1893 aa		13.09	□□□□□ -0.31
SORBS3-222	ENST00000524057	DDX19B	Q9UMR2	479 aa		13.09	□□□□□ -0.31
SORBS3-222	ENST00000524057	PCDHA11	Q9Y5I1	949 aa		13.09	□□□□□ -0.31
SORBS3-222	ENST00000524057	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.09	□□□□□ -0.31
SORBS3-222	ENST00000524057	TRANK1	O15050	2925 aa		13.08	□□□□□ -0.32
SORBS3-222	ENST00000524057		A0A0U1RQG5	324 aa	Predicted RBP	13.08	□□□□□ -0.32
SORBS3-222	ENST00000524057	DUSP11	O75319	330 aa	Known RBP	13.08	□□□□□ -0.32
SORBS3-222	ENST00000524057	SURF6	O75683	361 aa	Known RBP	13.08	□□□□□ -0.32
SORBS3-222	ENST00000524057	CYP7A1	P22680	504 aa		13.08	□□□□□ -0.32
SORBS3-222	ENST00000524057	KCTD2	Q14681	263 aa		13.08	□□□□□ -0.32
SORBS3-222	ENST00000524057	SIAH1	Q8IUQ4	282 aa		13.08	□□□□□ -0.32
SORBS3-222	ENST00000524057	MIGA1	Q8NAN2	632 aa		13.08	□□□□□ -0.32
SORBS3-222	ENST00000524057	PCSK9	Q8NBP7	692 aa	Known RBP	13.08	□□□□□ -0.32
SORBS3-222	ENST00000524057	HLA-C	Q95604	372 aa		13.08	□□□□□ -0.32
SORBS3-222	ENST00000524057	CERS4	Q9HA82	394 aa		13.08	□□□□□ -0.32
SORBS3-222	ENST00000524057	PIH1D3	Q9NQM4	214 aa	Known RBP	13.08	□□□□□ -0.32
SORBS3-222	ENST00000524057	ADAMTS5	Q9UNA0	930 aa		13.08	□□□□□ -0.32
SORBS3-222	ENST00000524057	PCDHB15	Q9Y5E8	787 aa		13.08	□□□□□ -0.32
SORBS3-222	ENST00000524057	SLC4A7	Q9Y6M7	1214 aa		13.08	□□□□□ -0.32
SORBS3-222	ENST00000524057	UMODL1	Q5DID0	1318 aa		13.08	□□□□□ -0.32
SORBS3-222	ENST00000524057	FOCAD	Q5VW36	1801 aa		13.07	□□□□□ -0.32
SORBS3-222	ENST00000524057	PRR33	A8MZF0	331 aa		13.07	□□□□□ -0.32
SORBS3-222	ENST00000524057	TLR3	O15455	904 aa	Known RBP	13.07	□□□□□ -0.32
SORBS3-222	ENST00000524057	GTPBP6	O43824	516 aa	Predicted RBP	13.07	□□□□□ -0.32
SORBS3-222	ENST00000524057	C6orf222	P0C671	652 aa	Predicted RBP	13.07	□□□□□ -0.32
SORBS3-222	ENST00000524057	MS4A1	P11836	297 aa		13.07	□□□□□ -0.32
SORBS3-222	ENST00000524057	CST5	P28325	142 aa	Predicted RBP	13.07	□□□□□ -0.32
SORBS3-222	ENST00000524057	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.07	□□□□□ -0.32
SORBS3-222	ENST00000524057	RIOX2	Q8IUF8	465 aa		13.07	□□□□□ -0.32
SORBS3-222	ENST00000524057	SPICE1	Q8N0Z3	855 aa		13.07	□□□□□ -0.32
SORBS3-222	ENST00000524057	EAF2	Q96CJ1	260 aa	Predicted RBP	13.07	□□□□□ -0.32
SORBS3-222	ENST00000524057	VWCE	Q96DN2	955 aa		13.07	□□□□□ -0.32
SORBS3-222	ENST00000524057	TLR7	Q9NYK1	1049 aa	Known RBP	13.07	□□□□□ -0.32
SORBS3-222	ENST00000524057	EXOC6B	Q9Y2D4	811 aa		13.07	□□□□□ -0.32
SORBS3-222	ENST00000524057	GBF1	Q92538	1859 aa		13.07	□□□□□ -0.32
SORBS3-222	ENST00000524057	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.07	□□□□□ -0.32
SORBS3-222	ENST00000524057	EPOP	A6NHQ4	379 aa		13.06	□□□□□ -0.32
SORBS3-222	ENST00000524057	MPHOSPH10	O00566	681 aa	Known RBP	13.06	□□□□□ -0.32
SORBS3-222	ENST00000524057	ADCY6	O43306	1168 aa		13.06	□□□□□ -0.32
SORBS3-222	ENST00000524057	IGSF3	O75054	1194 aa		13.06	□□□□□ -0.32
SORBS3-222	ENST00000524057	STAT3	P40763	770 aa		13.06	□□□□□ -0.32
SORBS3-222	ENST00000524057	CCL23	P55773	120 aa		13.06	□□□□□ -0.32
SORBS3-222	ENST00000524057	GABPA	Q06546	454 aa		13.06	□□□□□ -0.32
SORBS3-222	ENST00000524057	GNAS	Q5JWF2	1037 aa		13.06	□□□□□ -0.32
SORBS3-222	ENST00000524057	TTC39A	Q5SRH9	613 aa		13.06	□□□□□ -0.32
SORBS3-222	ENST00000524057	CRBN	Q96SW2	442 aa		13.06	□□□□□ -0.32
SORBS3-222	ENST00000524057		A0A0G2JMZ2	1700 aa		13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	CA3	P07451	260 aa		13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	ZAP70	P43403	619 aa		13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	GJA9	P57773	515 aa		13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	NHLH1	Q02575	133 aa		13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	EVX2	Q03828	476 aa		13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	TNNI3K	Q59H18	835 aa		13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	TMEM67	Q5HYA8	995 aa		13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	CCDC158	Q5M9N0	1113 aa		13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	MAMDC4	Q6UXC1	1216 aa		13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	MSL3	Q8N5Y2	521 aa	Known RBP	13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	SLC43A3	Q8NBI5	491 aa		13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	DBNDD2	Q9BQY9	259 aa		13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	HIPK3	Q9H422	1215 aa		13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	GPR108	Q9NPR9	543 aa		13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	DBNL	Q9UJU6	430 aa	Known RBP	13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	FPGT-TNNI3K	V9GXZ4	949 aa		13.05	□□□□□ -0.32
SORBS3-222	ENST00000524057	MYH1	P12882	1939 aa		13.04	□□□□□ -0.32
SORBS3-222	ENST00000524057	CTAGE5	O15320	804 aa		13.04	□□□□□ -0.32
SORBS3-222	ENST00000524057	ATP2A2	P16615	1042 aa	Known RBP	13.04	□□□□□ -0.32
SORBS3-222	ENST00000524057	ACVR2B	Q13705	512 aa		13.04	□□□□□ -0.32
SORBS3-222	ENST00000524057	RPUSD2	Q8IZ73	545 aa	Known RBP	13.04	□□□□□ -0.32
SORBS3-222	ENST00000524057	UPF3A	Q9H1J1	476 aa	Known RBP	13.04	□□□□□ -0.32
SORBS3-222	ENST00000524057	WNT8A	Q9H1J5	351 aa		13.04	□□□□□ -0.32
SORBS3-222	ENST00000524057	SPC25	Q9HBM1	224 aa		13.04	□□□□□ -0.32
SORBS3-222	ENST00000524057	FBXO28	Q9NVF7	368 aa		13.04	□□□□□ -0.32
SORBS3-222	ENST00000524057	TMX2	Q9Y320	296 aa		13.04	□□□□□ -0.32
SORBS3-222	ENST00000524057	LRRC37A2	A6NM11	1700 aa		13.03	□□□□□ -0.32
SORBS3-222	ENST00000524057	ZBBX	A8MT70	800 aa		13.03	□□□□□ -0.32
SORBS3-222	ENST00000524057	VWA5A	O00534	786 aa		13.03	□□□□□ -0.32
SORBS3-222	ENST00000524057	POLR3D	P05423	398 aa	Predicted RBP	13.03	□□□□□ -0.32
SORBS3-222	ENST00000524057	CCDC144B	Q3MJ40	725 aa		13.03	□□□□□ -0.32
SORBS3-222	ENST00000524057	CERS3	Q8IU89	383 aa		13.03	□□□□□ -0.32
SORBS3-222	ENST00000524057	MAGEB6	Q8N7X4	407 aa		13.03	□□□□□ -0.32
SORBS3-222	ENST00000524057	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.03	□□□□□ -0.32
SORBS3-222	ENST00000524057	UIMC1	Q96RL1	719 aa		13.03	□□□□□ -0.32
SORBS3-222	ENST00000524057	NOC4L	Q9BVI4	516 aa	Known RBP	13.03	□□□□□ -0.32
SORBS3-222	ENST00000524057	VCPKMT	Q9H867	229 aa		13.03	□□□□□ -0.32
SORBS3-222	ENST00000524057	ZNF214	Q9UL59	606 aa	Predicted RBP	13.03	□□□□□ -0.32
SORBS3-222	ENST00000524057	DNAJC25-GNG10	A0A024R161	153 aa		13.02	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms