RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 PDIA3P30101 505 aaKnown RBP9.01□□□□□ -0.97
SPIDR-223ENST00000524033 APOBRQ0VD83 1088 aa9.01□□□□□ -0.97
SPIDR-223ENST00000524033 DHX8Q14562 1220 aaKnown RBP9.01□□□□□ -0.97
SPIDR-223ENST00000524033 NAA30Q147X3 362 aaPredicted RBP9.01□□□□□ -0.97
SPIDR-223ENST00000524033 TUSC1Q2TAM9 212 aa9.01□□□□□ -0.97
SPIDR-223ENST00000524033 TMEM259Q4ZIN3 620 aa9.01□□□□□ -0.97
SPIDR-223ENST00000524033 ADALQ6DHV7 355 aa9.01□□□□□ -0.97
SPIDR-223ENST00000524033 AOPEPQ8N6M6 819 aa9.01□□□□□ -0.97
SPIDR-223ENST00000524033 LINC00301Q8NCQ3 95 aa9.01□□□□□ -0.97
SPIDR-223ENST00000524033 CCDC150Q8NCX0 1101 aa9.01□□□□□ -0.97
SPIDR-223ENST00000524033 MRPS27Q92552 414 aaKnown RBP9.01□□□□□ -0.97
SPIDR-223ENST00000524033 HLA-CQ95604 372 aa9.01□□□□□ -0.97
SPIDR-223ENST00000524033 KRTAP3-3Q9BYR6 98 aa9.01□□□□□ -0.97
SPIDR-223ENST00000524033 KRTAP3-2Q9BYR7 98 aa9.01□□□□□ -0.97
SPIDR-223ENST00000524033 SAGE1Q9NXZ1 904 aa9.01□□□□□ -0.97
SPIDR-223ENST00000524033 WDR19Q8NEZ3 1342 aa9.01□□□□□ -0.97
SPIDR-223ENST00000524033 IRS2Q9Y4H2 1338 aa9.01□□□□□ -0.97
SPIDR-223ENST00000524033 FAM237AA0A1B0GTK4 181 aa9□□□□□ -0.97
SPIDR-223ENST00000524033 F8W031 263 aaPredicted RBP9□□□□□ -0.97
SPIDR-223ENST00000524033 KINO60870 393 aaKnown RBP9□□□□□ -0.97
SPIDR-223ENST00000524033 SLFN14P0C7P3 912 aa9□□□□□ -0.97
SPIDR-223ENST00000524033 SKILP12757 684 aa9□□□□□ -0.97
SPIDR-223ENST00000524033 H2AFXP16104 143 aaPredicted RBP9□□□□□ -0.97
SPIDR-223ENST00000524033 FAM193AP78312 1265 aa9□□□□□ -0.97
SPIDR-223ENST00000524033 NCAPHQ15003 741 aa9□□□□□ -0.97
SPIDR-223ENST00000524033 PTPN14Q15678 1187 aa9□□□□□ -0.97
SPIDR-223ENST00000524033 QPCTQ16769 361 aa9□□□□□ -0.97
SPIDR-223ENST00000524033 PUS10Q3MIT2 529 aaKnown RBP9□□□□□ -0.97
SPIDR-223ENST00000524033 E4F1Q66K89 784 aaPredicted RBP9□□□□□ -0.97
SPIDR-223ENST00000524033 CREBRFQ8IUR6 639 aa9□□□□□ -0.97
SPIDR-223ENST00000524033 APOBEC3FQ8IUX4 373 aaKnown RBP9□□□□□ -0.97
SPIDR-223ENST00000524033 CERS5Q8N5B7 392 aa9□□□□□ -0.97
SPIDR-223ENST00000524033 MTMR14Q8NCE2 650 aa9□□□□□ -0.97
SPIDR-223ENST00000524033 DNAJC2Q99543 621 aaKnown RBP9□□□□□ -0.97
SPIDR-223ENST00000524033 LRRC2Q9BYS8 371 aa9□□□□□ -0.97
SPIDR-223ENST00000524033 MCOLN1Q9GZU1 580 aa9□□□□□ -0.97
SPIDR-223ENST00000524033 DEFB129Q9H1M3 183 aa9□□□□□ -0.97
SPIDR-223ENST00000524033 PAG1Q9NWQ8 432 aa9□□□□□ -0.97
SPIDR-223ENST00000524033 ZNF215Q9UL58 517 aaPredicted RBP9□□□□□ -0.97
SPIDR-223ENST00000524033 PCDHA7Q9UN72 937 aa9□□□□□ -0.97
SPIDR-223ENST00000524033 NDUFB9Q9Y6M9 179 aa9□□□□□ -0.97
SPIDR-223ENST00000524033 ACTN4O43707 911 aaKnown RBP8.99□□□□□ -0.97
SPIDR-223ENST00000524033 MYO1BO43795 1136 aa8.99□□□□□ -0.97
SPIDR-223ENST00000524033 CIAO1O76071 339 aa8.99□□□□□ -0.97
SPIDR-223ENST00000524033 TUBB4AP04350 444 aa8.99□□□□□ -0.97
SPIDR-223ENST00000524033 HSPD1P10809 573 aaKnown RBP8.99□□□□□ -0.97
SPIDR-223ENST00000524033 HIBADHP31937 336 aaKnown RBP8.99□□□□□ -0.97
SPIDR-223ENST00000524033 GYG1P46976 350 aa8.99□□□□□ -0.97
SPIDR-223ENST00000524033 RBM5P52756 815 aaKnown RBP eCLIP8.99□□□□□ -0.97
SPIDR-223ENST00000524033 NLRP12P59046 1061 aa8.99□□□□□ -0.97
SPIDR-223ENST00000524033 FKBP1AP62942 108 aaKnown RBP8.99□□□□□ -0.97
SPIDR-223ENST00000524033 DGKZQ13574 1117 aa8.99□□□□□ -0.97
SPIDR-223ENST00000524033 MTMR2Q13614 643 aa8.99□□□□□ -0.97
SPIDR-223ENST00000524033 PRKG1Q13976 671 aa8.99□□□□□ -0.97
SPIDR-223ENST00000524033 UBE4AQ14139 1066 aa8.99□□□□□ -0.97
SPIDR-223ENST00000524033 CFAP100Q494V2 611 aa8.99□□□□□ -0.97
SPIDR-223ENST00000524033 AXDND1Q5T1B0 1012 aaPredicted RBP8.99□□□□□ -0.97
SPIDR-223ENST00000524033 PRPF38BQ5VTL8 546 aaKnown RBP8.99□□□□□ -0.97
SPIDR-223ENST00000524033 ARMCX5Q6P1M9 558 aa8.99□□□□□ -0.97
SPIDR-223ENST00000524033 FBXO38Q6PIJ6 1188 aa8.99□□□□□ -0.97
SPIDR-223ENST00000524033 ARMC9Q7Z3E5 817 aa8.99□□□□□ -0.97
SPIDR-223ENST00000524033 RASAL3Q86YV0 1011 aa8.99□□□□□ -0.97
SPIDR-223ENST00000524033 MB21D2Q8IYB1 491 aaPredicted RBP8.99□□□□□ -0.97
SPIDR-223ENST00000524033 ZBED3Q96IU2 234 aaPredicted RBP8.99□□□□□ -0.97
SPIDR-223ENST00000524033 FAM84BQ96KN1 310 aaPredicted RBP8.99□□□□□ -0.97
SPIDR-223ENST00000524033 PRMT6Q96LA8 375 aaPredicted RBP8.99□□□□□ -0.97
SPIDR-223ENST00000524033 PUS3Q9BZE2 481 aaKnown RBP8.99□□□□□ -0.97
SPIDR-223ENST00000524033 JAG2Q9Y219 1238 aa8.99□□□□□ -0.97
SPIDR-223ENST00000524033 RIPOR2Q9Y4F9 1068 aa8.99□□□□□ -0.97
SPIDR-223ENST00000524033 PCDHB3Q9Y5E6 796 aa8.99□□□□□ -0.97
SPIDR-223ENST00000524033 MROH7-TTC4A0A0A0MT08 1334 aa8.99□□□□□ -0.97
SPIDR-223ENST00000524033 A0A087WWV3 80 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 M0R2C6 588 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 IKBKBO14920 756 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 RNF113AO15541 343 aaKnown RBP8.98□□□□□ -0.97
SPIDR-223ENST00000524033 RAD21O60216 631 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 LILRB3O75022 631 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 SLU7O95391 586 aaKnown RBP8.98□□□□□ -0.97
SPIDR-223ENST00000524033 Q3C1V9 767 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 DPCR1Q3MIW9 517 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 SUPT20HL1Q3ZLR7 823 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 LDLRAD1Q5T700 205 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 BRAPQ7Z569 592 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 VPS37DQ86XT2 251 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 KRT222Q8N1A0 295 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 KCNG4Q8TDN1 519 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 SLC10A4Q96EP9 437 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 PPP1R13BQ96KQ4 1090 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 TIGD1Q96MW7 591 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 HSD3B7Q9H2F3 369 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 NCOA5Q9HCD5 579 aaKnown RBP8.98□□□□□ -0.97
SPIDR-223ENST00000524033 TUBE1Q9UJT0 475 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 PCDHAC2Q9Y5I4 1007 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 MROH5Q6ZUA9 1318 aa8.98□□□□□ -0.97
SPIDR-223ENST00000524033 CLRN2A0PK11 232 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 BECN2A8MW95 431 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 PPP1R12BO60237 982 aaPredicted RBP8.97□□□□□ -0.97
SPIDR-223ENST00000524033 IL15P40933 162 aaPredicted RBP8.97□□□□□ -0.97
SPIDR-223ENST00000524033 TM4SF4P48230 202 aa8.97□□□□□ -0.97
SPIDR-223ENST00000524033 NDUFA8P51970 172 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms