RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 KRT32Q14532 448 aa15.02■□□□□ -0
VEGFA-224ENST00000523873 SART3Q15020 963 aaKnown RBP15.02■□□□□ -0
VEGFA-224ENST00000523873 WDR78Q5VTH9 848 aa15.02■□□□□ -0
VEGFA-224ENST00000523873 CPXCR1Q8N123 301 aa15.02■□□□□ -0
VEGFA-224ENST00000523873 MYL10Q9BUA6 226 aa15.02■□□□□ -0
VEGFA-224ENST00000523873 MOV10L1Q9BXT6 1211 aaKnown RBP15.02■□□□□ -0
VEGFA-224ENST00000523873 PRR12Q9ULL5 1215 aa15.02■□□□□ -0
VEGFA-224ENST00000523873 GABRQQ9UN88 632 aa15.02■□□□□ -0
VEGFA-224ENST00000523873 EPB41L2O43491 1005 aaKnown RBP15.01□□□□□ -0.01
VEGFA-224ENST00000523873 EXOSC10Q01780 885 aaKnown RBP15.01□□□□□ -0.01
VEGFA-224ENST00000523873 PRKCZQ05513 592 aa15.01□□□□□ -0.01
VEGFA-224ENST00000523873 DHX32Q7L7V1 743 aaKnown RBP15.01□□□□□ -0.01
VEGFA-224ENST00000523873 FAM160B2Q86V87 743 aa15.01□□□□□ -0.01
VEGFA-224ENST00000523873 STAG2Q8N3U4 1231 aa15.01□□□□□ -0.01
VEGFA-224ENST00000523873 PRPF38AQ8NAV1 312 aaKnown RBP15.01□□□□□ -0.01
VEGFA-224ENST00000523873 TMEM87BQ96K49 555 aa15.01□□□□□ -0.01
VEGFA-224ENST00000523873 UBA5Q9GZZ9 404 aa15.01□□□□□ -0.01
VEGFA-224ENST00000523873 SPATC1LQ9H0A9 340 aa15.01□□□□□ -0.01
VEGFA-224ENST00000523873 RAVER2Q9HCJ3 691 aaKnown RBP15.01□□□□□ -0.01
VEGFA-224ENST00000523873 ZNF214Q9UL59 606 aaPredicted RBP15.01□□□□□ -0.01
VEGFA-224ENST00000523873 MCM3APO60318 1980 aa15.01□□□□□ -0.01
VEGFA-224ENST00000523873 LCTP09848 1927 aa15.01□□□□□ -0.01
VEGFA-224ENST00000523873 RBBP6Q7Z6E9 1792 aaKnown RBP15.01□□□□□ -0.01
VEGFA-224ENST00000523873 ERCC3P19447 782 aa15□□□□□ -0.01
VEGFA-224ENST00000523873 RXRAP19793 462 aa15□□□□□ -0.01
VEGFA-224ENST00000523873 CASTP20810 708 aaKnown RBP15□□□□□ -0.01
VEGFA-224ENST00000523873 SYDE2Q5VT97 1194 aa15□□□□□ -0.01
VEGFA-224ENST00000523873 CCDC174Q6PII3 467 aa15□□□□□ -0.01
VEGFA-224ENST00000523873 NFXL1Q6ZNB6 911 aa15□□□□□ -0.01
VEGFA-224ENST00000523873 GPR142Q7Z601 462 aa15□□□□□ -0.01
VEGFA-224ENST00000523873 NCAPG2Q86XI2 1143 aa15□□□□□ -0.01
VEGFA-224ENST00000523873 CCAR1Q8IX12 1150 aaKnown RBP15□□□□□ -0.01
VEGFA-224ENST00000523873 MB21D1Q8N884 522 aa15□□□□□ -0.01
VEGFA-224ENST00000523873 CHURC1Q8WUH1 139 aa15□□□□□ -0.01
VEGFA-224ENST00000523873 NUP133Q8WUM0 1156 aa15□□□□□ -0.01
VEGFA-224ENST00000523873 SLC38A10Q9HBR0 1119 aa15□□□□□ -0.01
VEGFA-224ENST00000523873 SRRDQ9UH36 339 aa15□□□□□ -0.01
VEGFA-224ENST00000523873 PTPN22Q9Y2R2 807 aa15□□□□□ -0.01
VEGFA-224ENST00000523873 CTDP1Q9Y5B0 961 aaPredicted RBP15□□□□□ -0.01
VEGFA-224ENST00000523873 PTCH2Q9Y6C5 1203 aa15□□□□□ -0.01
VEGFA-224ENST00000523873 ZNF236Q9UL36 1845 aa14.99□□□□□ -0.01
VEGFA-224ENST00000523873 PLA2G6O60733 806 aa14.99□□□□□ -0.01
VEGFA-224ENST00000523873 ZBED4O75132 1171 aa14.99□□□□□ -0.01
VEGFA-224ENST00000523873 PARP1P09874 1014 aaKnown RBP14.99□□□□□ -0.01
VEGFA-224ENST00000523873 GRM4Q14833 912 aa14.99□□□□□ -0.01
VEGFA-224ENST00000523873 SNRNP48Q6IEG0 339 aaKnown RBP14.99□□□□□ -0.01
VEGFA-224ENST00000523873 BLOC1S2Q6QNY1 142 aa14.99□□□□□ -0.01
VEGFA-224ENST00000523873 BTNL9Q6UXG8 535 aa14.99□□□□□ -0.01
VEGFA-224ENST00000523873 ZNF654Q8IZM8 581 aa14.99□□□□□ -0.01
VEGFA-224ENST00000523873 TNS4Q8IZW8 715 aa14.99□□□□□ -0.01
VEGFA-224ENST00000523873 CWC22Q9HCG8 908 aaKnown RBP14.99□□□□□ -0.01
VEGFA-224ENST00000523873 RIPK3Q9Y572 518 aa14.99□□□□□ -0.01
VEGFA-224ENST00000523873 ZNF536O15090 1300 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 WDR19Q8NEZ3 1342 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 CCDC69A6NI79 296 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 RPS6KB1P23443 525 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 MAPK4P31152 587 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 STAT3P40763 770 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 FLT3LGP49771 235 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 CCNA1P78396 465 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 TROAPQ12815 778 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 ARHGEF6Q15052 776 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 SLC35G1Q2M3R5 365 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 ASPRV1Q53RT3 343 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 FBXO46Q6PJ61 603 aaPredicted RBP14.98□□□□□ -0.01
VEGFA-224ENST00000523873 Q6ZUG5 572 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 PLEKHH3Q7Z736 793 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 CATIPQ7Z7H3 387 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 RIOX2Q8IUF8 465 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 CCDC144CPQ8IYA2 1237 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 COA7Q96BR5 231 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 AGBL1Q96MI9 1066 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 MTA3Q9BTC8 594 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 VAT1LQ9HCJ6 419 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 MAD2L2Q9UI95 211 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 BRPF3Q9ULD4 1205 aa14.98□□□□□ -0.01
VEGFA-224ENST00000523873 PSMA5P28066 241 aa14.97□□□□□ -0.01
VEGFA-224ENST00000523873 HOXD10P28358 340 aa14.97□□□□□ -0.01
VEGFA-224ENST00000523873 LIFRP42702 1097 aa14.97□□□□□ -0.01
VEGFA-224ENST00000523873 GPATCH4Q5T3I0 446 aaKnown RBP14.97□□□□□ -0.01
VEGFA-224ENST00000523873 TEX13BQ9BXU2 312 aa14.97□□□□□ -0.01
VEGFA-224ENST00000523873 UPF3BQ9BZI7 483 aaKnown RBP14.97□□□□□ -0.01
VEGFA-224ENST00000523873 RANBP17Q9H2T7 1088 aaKnown RBP14.97□□□□□ -0.01
VEGFA-224ENST00000523873 HOMER2Q9NSB8 354 aa14.97□□□□□ -0.01
VEGFA-224ENST00000523873 GJD2Q9UKL4 321 aa14.97□□□□□ -0.01
VEGFA-224ENST00000523873 PALM3A6NDB9 673 aaPredicted RBP14.96□□□□□ -0.01
VEGFA-224ENST00000523873 KLRF2D3W0D1 207 aa14.96□□□□□ -0.01
VEGFA-224ENST00000523873 DHX16O60231 1041 aaKnown RBP14.96□□□□□ -0.01
VEGFA-224ENST00000523873 DDAH1O94760 285 aa14.96□□□□□ -0.01
VEGFA-224ENST00000523873 GNRH1P01148 92 aa14.96□□□□□ -0.01
VEGFA-224ENST00000523873 HMGB1P09429 215 aaKnown RBP14.96□□□□□ -0.01
VEGFA-224ENST00000523873 CYP2B6P20813 491 aa14.96□□□□□ -0.01
VEGFA-224ENST00000523873 PTPREP23469 700 aa14.96□□□□□ -0.01
VEGFA-224ENST00000523873 APOBRQ0VD83 1088 aa14.96□□□□□ -0.01
VEGFA-224ENST00000523873 PKN2Q16513 984 aaKnown RBP14.96□□□□□ -0.01
VEGFA-224ENST00000523873 NBPF11Q86T75 865 aa14.96□□□□□ -0.01
VEGFA-224ENST00000523873 MICU3Q86XE3 530 aa14.96□□□□□ -0.01
VEGFA-224ENST00000523873 ADGRF4Q8IZF3 695 aa14.96□□□□□ -0.01
VEGFA-224ENST00000523873 SHCBP1Q8NEM2 672 aa14.96□□□□□ -0.01
VEGFA-224ENST00000523873 RAET1EQ8TD07 263 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 241 ms