RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 NBPF9Q3BBW0 867 aa7.01□□□□□ -1.29
NSMCE2-211ENST00000523549 NBPF12Q5TAG4 269 aaPredicted RBP7.01□□□□□ -1.29
NSMCE2-211ENST00000523549 FAM196AQ6ZSG2 479 aa7.01□□□□□ -1.29
NSMCE2-211ENST00000523549 SIRT2Q8IXJ6 389 aa7.01□□□□□ -1.29
NSMCE2-211ENST00000523549 ZNF655Q8N720 491 aaPredicted RBP7.01□□□□□ -1.29
NSMCE2-211ENST00000523549 LINC00116Q8NCU8 138 aa7.01□□□□□ -1.29
NSMCE2-211ENST00000523549 RELTQ969Z4 430 aa7.01□□□□□ -1.29
NSMCE2-211ENST00000523549 MAP6Q96JE9 813 aa7.01□□□□□ -1.29
NSMCE2-211ENST00000523549 FOXP3Q9BZS1 431 aa7.01□□□□□ -1.29
NSMCE2-211ENST00000523549 CEP170Q5SW79 1584 aa7□□□□□ -1.29
NSMCE2-211ENST00000523549 MROH2BQ7Z745 1585 aa7□□□□□ -1.29
NSMCE2-211ENST00000523549 ADAMTS20P59510 1910 aa7□□□□□ -1.29
NSMCE2-211ENST00000523549 A0A0G2JLL6 359 aaPredicted RBP7□□□□□ -1.29
NSMCE2-211ENST00000523549 MINDY4BA8MYZ0 360 aa7□□□□□ -1.29
NSMCE2-211ENST00000523549 SORBS3O60504 671 aa7□□□□□ -1.29
NSMCE2-211ENST00000523549 ATE1O95260 518 aa7□□□□□ -1.29
NSMCE2-211ENST00000523549 TCERG1LQ5VWI1 586 aa7□□□□□ -1.29
NSMCE2-211ENST00000523549 HHIPL1Q96JK4 782 aa7□□□□□ -1.29
NSMCE2-211ENST00000523549 LRRC3Q9BY71 257 aa7□□□□□ -1.29
NSMCE2-211ENST00000523549 ASCC2Q9H1I8 757 aaPredicted RBP7□□□□□ -1.29
NSMCE2-211ENST00000523549 ZCCHC4Q9H5U6 513 aa7□□□□□ -1.29
NSMCE2-211ENST00000523549 SRCAPQ6ZRS2 3230 aa6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 ROBO2Q9HCK4 1378 aa6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 KIF21BO75037 1637 aa6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 GREM1O60565 184 aa6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 TRIM13O60858 407 aa6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 USP2O75604 605 aaPredicted RBP6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 YBX1P67809 324 aaKnown RBP6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 SRSF3P84103 164 aaKnown RBP6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 TAGLNQ01995 201 aaKnown RBP6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 ARSHQ5FYA8 562 aa6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 SNAP47Q5SQN1 464 aa6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 ADGRF1Q5T601 910 aa6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 FBXL19Q6PCT2 694 aa6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 WAPLQ7Z5K2 1190 aa6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 TMC3Q7Z5M5 1100 aa6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 PANK1Q8TE04 598 aa6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 DACT3Q96B18 629 aaPredicted RBP6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 EPB41L4AQ9HCS5 686 aaPredicted RBP6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 ZMYM5Q9UJ78 669 aa6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 TCFL5Q9UL49 500 aa6.99□□□□□ -1.29
NSMCE2-211ENST00000523549 PNLIPP16233 465 aa6.98□□□□□ -1.29
NSMCE2-211ENST00000523549 RNF4P78317 190 aa6.98□□□□□ -1.29
NSMCE2-211ENST00000523549 SNW1Q13573 536 aaKnown RBP6.98□□□□□ -1.29
NSMCE2-211ENST00000523549 BBS9Q3SYG4 887 aa6.98□□□□□ -1.29
NSMCE2-211ENST00000523549 CDCP2Q5VXM1 449 aa6.98□□□□□ -1.29
NSMCE2-211ENST00000523549 ERMP1Q7Z2K6 904 aa6.98□□□□□ -1.29
NSMCE2-211ENST00000523549 TMEM151BQ8IW70 566 aa6.98□□□□□ -1.29
NSMCE2-211ENST00000523549 SIGLEC10Q96LC7 697 aa6.98□□□□□ -1.29
NSMCE2-211ENST00000523549 CNTD2Q9H8S5 307 aa6.98□□□□□ -1.29
NSMCE2-211ENST00000523549 FOXD2O60548 495 aaPredicted RBP6.97□□□□□ -1.29
NSMCE2-211ENST00000523549 VIPR1P32241 457 aa6.97□□□□□ -1.29
NSMCE2-211ENST00000523549 PCBP3P57721 371 aaKnown RBP6.97□□□□□ -1.29
NSMCE2-211ENST00000523549 SLC14A2Q15849 920 aa6.97□□□□□ -1.29
NSMCE2-211ENST00000523549 ZPBP2Q6X784 338 aa6.97□□□□□ -1.29
NSMCE2-211ENST00000523549 CEP128Q6ZU80 1094 aa6.97□□□□□ -1.29
NSMCE2-211ENST00000523549 PLCD4Q9BRC7 762 aa6.97□□□□□ -1.29
NSMCE2-211ENST00000523549 EHMT1Q9H9B1 1298 aa6.97□□□□□ -1.29
NSMCE2-211ENST00000523549 BRMS1Q9HCU9 246 aa6.97□□□□□ -1.29
NSMCE2-211ENST00000523549 PCDHB14Q9Y5E9 798 aa6.97□□□□□ -1.29
NSMCE2-211ENST00000523549 RFXAPO00287 272 aa6.96□□□□□ -1.3
NSMCE2-211ENST00000523549 N4BP3O15049 544 aa6.96□□□□□ -1.3
NSMCE2-211ENST00000523549 TLR3O15455 904 aaKnown RBP6.96□□□□□ -1.3
NSMCE2-211ENST00000523549 RAG1P15918 1043 aa6.96□□□□□ -1.3
NSMCE2-211ENST00000523549 PI3P19957 117 aa6.96□□□□□ -1.3
NSMCE2-211ENST00000523549 CEBPAP49715 358 aaPredicted RBP6.96□□□□□ -1.3
NSMCE2-211ENST00000523549 ERVFRD-1P60508 538 aa6.96□□□□□ -1.3
NSMCE2-211ENST00000523549 MLECQ14165 292 aa6.96□□□□□ -1.3
NSMCE2-211ENST00000523549 XYLT2Q9H1B5 865 aa6.96□□□□□ -1.3
NSMCE2-211ENST00000523549 CNNM2Q9H8M5 875 aa6.96□□□□□ -1.3
NSMCE2-211ENST00000523549 COPRSQ9NQ92 184 aa6.96□□□□□ -1.3
NSMCE2-211ENST00000523549 KBTBD4Q9NVX7 518 aa6.96□□□□□ -1.3
NSMCE2-211ENST00000523549 SIRT5Q9NXA8 310 aa6.96□□□□□ -1.3
NSMCE2-211ENST00000523549 GMIPQ9P107 970 aa6.96□□□□□ -1.3
NSMCE2-211ENST00000523549 PTPRMP28827 1452 aa6.96□□□□□ -1.3
NSMCE2-211ENST00000523549 FADS2P1A8MWK0 482 aa6.95□□□□□ -1.3
NSMCE2-211ENST00000523549 IRS4O14654 1257 aaPredicted RBP6.95□□□□□ -1.3
NSMCE2-211ENST00000523549 PRAMEF1O95521 474 aa6.95□□□□□ -1.3
NSMCE2-211ENST00000523549 HSPA2P54652 639 aa6.95□□□□□ -1.3
NSMCE2-211ENST00000523549 EPHB3P54753 998 aa6.95□□□□□ -1.3
NSMCE2-211ENST00000523549 CWF19L2Q2TBE0 894 aaKnown RBP6.95□□□□□ -1.3
NSMCE2-211ENST00000523549 PRDM14Q9GZV8 571 aa6.95□□□□□ -1.3
NSMCE2-211ENST00000523549 TNFRSF10DQ9UBN6 386 aa6.95□□□□□ -1.3
NSMCE2-211ENST00000523549 IRAK3Q9Y616 596 aa6.95□□□□□ -1.3
NSMCE2-211ENST00000523549 MAGI1Q96QZ7 1491 aaPredicted RBP6.95□□□□□ -1.3
NSMCE2-211ENST00000523549 ADCY10Q96PN6 1610 aa6.94□□□□□ -1.3
NSMCE2-211ENST00000523549 SIGLEC6O43699 453 aa6.94□□□□□ -1.3
NSMCE2-211ENST00000523549 SYPP08247 313 aa6.94□□□□□ -1.3
NSMCE2-211ENST00000523549 SDHBP21912 280 aa6.94□□□□□ -1.3
NSMCE2-211ENST00000523549 POLR2BP30876 1174 aaKnown RBP6.94□□□□□ -1.3
NSMCE2-211ENST00000523549 CCNFP41002 786 aa6.94□□□□□ -1.3
NSMCE2-211ENST00000523549 RTP1P59025 263 aa6.94□□□□□ -1.3
NSMCE2-211ENST00000523549 CHMP4BP1P59074 171 aa6.94□□□□□ -1.3
NSMCE2-211ENST00000523549 RAD51AP2Q09MP3 1159 aa6.94□□□□□ -1.3
NSMCE2-211ENST00000523549 TMEFF1Q8IYR6 380 aa6.94□□□□□ -1.3
NSMCE2-211ENST00000523549 ATG4CQ96DT6 458 aa6.94□□□□□ -1.3
NSMCE2-211ENST00000523549 RTEL1Q9NZ71 1219 aa6.94□□□□□ -1.3
NSMCE2-211ENST00000523549 KLHL14Q9P2G3 628 aa6.94□□□□□ -1.3
NSMCE2-211ENST00000523549 DNMBPQ6XZF7 1577 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms