RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 KIAA0355O15063 1070 aa31.07■■■□□ 2.56
PVT1-219ENST00000523427 TEX13BQ9BXU2 312 aa31.07■■■□□ 2.56
PVT1-219ENST00000523427 ARPP21Q9UBL0 812 aaPredicted RBP31.07■■■□□ 2.56
PVT1-219ENST00000523427 CTDP1Q9Y5B0 961 aaPredicted RBP31.07■■■□□ 2.56
PVT1-219ENST00000523427 ADAMTS4O75173 837 aa31.06■■■□□ 2.56
PVT1-219ENST00000523427 ACLYP53396 1101 aa31.06■■■□□ 2.56
PVT1-219ENST00000523427 FPGSQ05932 587 aa31.06■■■□□ 2.56
PVT1-219ENST00000523427 FAM184BQ9ULE4 1060 aa31.06■■■□□ 2.56
PVT1-219ENST00000523427 SYNRGQ9UMZ2 1314 aa31.05■■■□□ 2.56
PVT1-219ENST00000523427 F5H6K3 240 aa31.05■■■□□ 2.56
PVT1-219ENST00000523427 KLRC3Q07444 240 aa31.05■■■□□ 2.56
PVT1-219ENST00000523427 PLXNA1Q9UIW2 1896 aa31.05■■■□□ 2.56
PVT1-219ENST00000523427 DCDC2CA8MYV0 355 aa31.04■■■□□ 2.56
PVT1-219ENST00000523427 SNAI1O95863 264 aaPredicted RBP31.04■■■□□ 2.56
PVT1-219ENST00000523427 NDUFB10O96000 172 aa31.04■■■□□ 2.56
PVT1-219ENST00000523427 RASA1P20936 1047 aa31.04■■■□□ 2.56
PVT1-219ENST00000523427 IRX5P78411 483 aaPredicted RBP31.04■■■□□ 2.56
PVT1-219ENST00000523427 FAAP100Q0VG06 881 aa31.04■■■□□ 2.56
PVT1-219ENST00000523427 KCNA10Q16322 511 aa31.04■■■□□ 2.56
PVT1-219ENST00000523427 VTI1AQ96AJ9 217 aa31.04■■■□□ 2.56
PVT1-219ENST00000523427 STRBPQ96SI9 672 aaKnown RBP31.04■■■□□ 2.56
PVT1-219ENST00000523427 LRRCC1Q9C099 1032 aa31.04■■■□□ 2.56
PVT1-219ENST00000523427 CLIP2Q9UDT6 1046 aa31.04■■■□□ 2.56
PVT1-219ENST00000523427 NUP133Q8WUM0 1156 aa31.03■■■□□ 2.56
PVT1-219ENST00000523427 KIFC2Q96AC6 838 aa31.03■■■□□ 2.56
PVT1-219ENST00000523427 TSEN34Q9BSV6 310 aaKnown RBP31.03■■■□□ 2.56
PVT1-219ENST00000523427 MYADML2A6NDP7 307 aa31.02■■■□□ 2.56
PVT1-219ENST00000523427 RAVER2Q9HCJ3 691 aaKnown RBP31.02■■■□□ 2.56
PVT1-219ENST00000523427 EYSQ5T1H1 3165 aa31.01■■■□□ 2.56
PVT1-219ENST00000523427 GSG1L2A8MUP6 293 aa31.01■■■□□ 2.55
PVT1-219ENST00000523427 ZBED4O75132 1171 aa31.01■■■□□ 2.55
PVT1-219ENST00000523427 PRPF38AQ8NAV1 312 aaKnown RBP31.01■■■□□ 2.55
PVT1-219ENST00000523427 NYAP2Q9P242 653 aa31.01■■■□□ 2.55
PVT1-219ENST00000523427 PRDM1O75626 825 aa31■■■□□ 2.55
PVT1-219ENST00000523427 C6orf222P0C671 652 aaPredicted RBP31■■■□□ 2.55
PVT1-219ENST00000523427 KLHDC9Q8NEP7 349 aa31■■■□□ 2.55
PVT1-219ENST00000523427 ISY1Q9ULR0 285 aaKnown RBP31■■■□□ 2.55
PVT1-219ENST00000523427 ROBO3Q96MS0 1386 aa31■■■□□ 2.55
PVT1-219ENST00000523427 SYNGAP1Q96PV0 1343 aa30.99■■■□□ 2.55
PVT1-219ENST00000523427 GRIN2CQ14957 1233 aa30.99■■■□□ 2.55
PVT1-219ENST00000523427 SBK1Q52WX2 424 aa30.99■■■□□ 2.55
PVT1-219ENST00000523427 ANKRD33Q7Z3H0 272 aa30.99■■■□□ 2.55
PVT1-219ENST00000523427 ANKRD35Q8N283 1001 aa30.99■■■□□ 2.55
PVT1-219ENST00000523427 MSL3Q8N5Y2 521 aaKnown RBP30.99■■■□□ 2.55
PVT1-219ENST00000523427 CHMP4CQ96CF2 233 aa30.99■■■□□ 2.55
PVT1-219ENST00000523427 CHMP4BQ9H444 224 aaKnown RBP30.99■■■□□ 2.55
PVT1-219ENST00000523427 MYH7P12883 1935 aa30.98■■■□□ 2.55
PVT1-219ENST00000523427 DNAJC25-GNG10A0A024R161 153 aa30.98■■■□□ 2.55
PVT1-219ENST00000523427 MOXD2PA6NHM9 499 aa30.98■■■□□ 2.55
PVT1-219ENST00000523427 APPP05067 770 aa30.98■■■□□ 2.55
PVT1-219ENST00000523427 ACVR2BQ13705 512 aa30.98■■■□□ 2.55
PVT1-219ENST00000523427 TSHZ3Q63HK5 1081 aa30.98■■■□□ 2.55
PVT1-219ENST00000523427 ZNF444Q8N0Y2 327 aaPredicted RBP30.98■■■□□ 2.55
PVT1-219ENST00000523427 OSBP2Q969R2 916 aa30.98■■■□□ 2.55
PVT1-219ENST00000523427 GLT1D1Q96MS3 346 aa30.98■■■□□ 2.55
PVT1-219ENST00000523427 TOX2Q96NM4 488 aa30.98■■■□□ 2.55
PVT1-219ENST00000523427 ECHDC1Q9NTX5 307 aa30.98■■■□□ 2.55
PVT1-219ENST00000523427 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.98■■■□□ 2.55
PVT1-219ENST00000523427 HSFX4A0A1B0GTS1 333 aaPredicted RBP30.97■■■□□ 2.55
PVT1-219ENST00000523427 HSFX3A0A1B0GWH4 333 aaPredicted RBP30.97■■■□□ 2.55
PVT1-219ENST00000523427 DUSP11O75319 330 aaKnown RBP30.97■■■□□ 2.55
PVT1-219ENST00000523427 DNAJB2P25686 324 aa30.97■■■□□ 2.55
PVT1-219ENST00000523427 TDO2P48775 406 aa30.97■■■□□ 2.55
PVT1-219ENST00000523427 MAMDC4Q6UXC1 1216 aa30.97■■■□□ 2.55
PVT1-219ENST00000523427 LRRC47Q8N1G4 583 aaKnown RBP30.97■■■□□ 2.55
PVT1-219ENST00000523427 HOMER2Q9NSB8 354 aa30.97■■■□□ 2.55
PVT1-219ENST00000523427 PRUNE2Q8WUY3 3088 aa30.97■■■□□ 2.55
PVT1-219ENST00000523427 TIMP1P01033 207 aa30.96■■■□□ 2.55
PVT1-219ENST00000523427 CCDC144BQ3MJ40 725 aa30.96■■■□□ 2.55
PVT1-219ENST00000523427 BUD13Q9BRD0 619 aaKnown RBP eCLIP30.96■■■□□ 2.551e-10■□□□□ 10.1
PVT1-219ENST00000523427 SPC25Q9HBM1 224 aa30.96■■■□□ 2.55
PVT1-219ENST00000523427 ADCY6O43306 1168 aa30.95■■■□□ 2.55
PVT1-219ENST00000523427 ASGR1P07306 291 aa30.95■■■□□ 2.55
PVT1-219ENST00000523427 CCSAPQ6IQ19 270 aaPredicted RBP30.95■■■□□ 2.55
PVT1-219ENST00000523427 VCANP13611 3396 aa30.95■■■□□ 2.54
PVT1-219ENST00000523427 TMEM265A0A087WTH1 108 aa30.94■■■□□ 2.54
PVT1-219ENST00000523427 GNASQ5JWF2 1037 aa30.94■■■□□ 2.54
PVT1-219ENST00000523427 CCDC129Q6ZRS4 1044 aa30.94■■■□□ 2.54
PVT1-219ENST00000523427 KBTBD3Q8NAB2 608 aa30.94■■■□□ 2.54
PVT1-219ENST00000523427 APPBP2Q92624 585 aa30.94■■■□□ 2.54
PVT1-219ENST00000523427 CEP95Q96GE4 821 aa30.94■■■□□ 2.54
PVT1-219ENST00000523427 PPP1R12CQ9BZL4 782 aa30.94■■■□□ 2.54
PVT1-219ENST00000523427 SLC38A10Q9HBR0 1119 aa30.94■■■□□ 2.54
PVT1-219ENST00000523427 EPB41L4AQ9HCS5 686 aaPredicted RBP30.94■■■□□ 2.54
PVT1-219ENST00000523427 TBX21Q9UL17 535 aa30.94■■■□□ 2.54
PVT1-219ENST00000523427 GPAA1O43292 621 aa30.93■■■□□ 2.54
PVT1-219ENST00000523427 MFSD5Q6N075 450 aa30.93■■■□□ 2.54
PVT1-219ENST00000523427 GIMAP6Q6P9H5 292 aa30.93■■■□□ 2.54
PVT1-219ENST00000523427 NOL8Q76FK4 1167 aaKnown RBP30.93■■■□□ 2.54
PVT1-219ENST00000523427 ARMCX2Q7L311 632 aa30.93■■■□□ 2.54
PVT1-219ENST00000523427 ZNF467Q7Z7K2 595 aaPredicted RBP30.93■■■□□ 2.54
PVT1-219ENST00000523427 PCSK9Q8NBP7 692 aaKnown RBP30.93■■■□□ 2.54
PVT1-219ENST00000523427 ABHD16BQ9H3Z7 469 aa30.93■■■□□ 2.54
PVT1-219ENST00000523427 ZNF576Q9H609 170 aa30.93■■■□□ 2.54
PVT1-219ENST00000523427 FEM1BQ9UK73 627 aa30.93■■■□□ 2.54
PVT1-219ENST00000523427 CDH23Q9H251 3354 aa30.92■■■□□ 2.54
PVT1-219ENST00000523427 GRXCR1A8MXD5 290 aa30.92■■■□□ 2.54
PVT1-219ENST00000523427 ATP2A1O14983 1001 aa30.92■■■□□ 2.54
PVT1-219ENST00000523427 RNF113AO15541 343 aaKnown RBP30.92■■■□□ 2.54
PVT1-219ENST00000523427 C20orf194Q5TEA3 1177 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms