RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 KCNH3Q9ULD8 1083 aa7.45□□□□□ -1.22
SKP1-211ENST00000523359 CTNND2Q9UQB3 1225 aa7.45□□□□□ -1.22
SKP1-211ENST00000523359 CAPN6Q9Y6Q1 641 aa7.45□□□□□ -1.22
SKP1-211ENST00000523359 H3BS24 57 aa7.44□□□□□ -1.22
SKP1-211ENST00000523359 SHOXO15266 292 aa7.44□□□□□ -1.22
SKP1-211ENST00000523359 PDPK1O15530 556 aa7.44□□□□□ -1.22
SKP1-211ENST00000523359 CBFA2T2O43439 604 aa7.44□□□□□ -1.22
SKP1-211ENST00000523359 AUHQ13825 339 aaKnown RBP7.44□□□□□ -1.22
SKP1-211ENST00000523359 NFE2L2Q16236 605 aa7.44□□□□□ -1.22
SKP1-211ENST00000523359 KCNMB1Q16558 191 aa7.44□□□□□ -1.22
SKP1-211ENST00000523359 NBPF9Q3BBW0 867 aa7.44□□□□□ -1.22
SKP1-211ENST00000523359 C22orf34Q6ZV56 151 aa7.44□□□□□ -1.22
SKP1-211ENST00000523359 MRFAP1L1Q96HT8 127 aa7.44□□□□□ -1.22
SKP1-211ENST00000523359 FGD4Q96M96 766 aa7.44□□□□□ -1.22
SKP1-211ENST00000523359 SEMA3GQ9NS98 782 aa7.44□□□□□ -1.22
SKP1-211ENST00000523359 ZNF451Q9Y4E5 1061 aa7.44□□□□□ -1.22
SKP1-211ENST00000523359 SUSD5O60279 629 aa7.43□□□□□ -1.22
SKP1-211ENST00000523359 EPHX1P07099 455 aa7.43□□□□□ -1.22
SKP1-211ENST00000523359 RASGRF1Q13972 1273 aa7.43□□□□□ -1.22
SKP1-211ENST00000523359 HEATR6Q6AI08 1181 aaKnown RBP7.43□□□□□ -1.22
SKP1-211ENST00000523359 PRDM14Q9GZV8 571 aa7.43□□□□□ -1.22
SKP1-211ENST00000523359 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.43□□□□□ -1.22
SKP1-211ENST00000523359 SUSD2Q9UGT4 822 aa7.43□□□□□ -1.22
SKP1-211ENST00000523359 PCDHB12Q9Y5F1 795 aa7.43□□□□□ -1.22
SKP1-211ENST00000523359 ZNF503-AS2A6NEH8 195 aa7.42□□□□□ -1.22
SKP1-211ENST00000523359 LRRC10BA6NIK2 292 aa7.42□□□□□ -1.22
SKP1-211ENST00000523359 CD247P20963 164 aa7.42□□□□□ -1.22
SKP1-211ENST00000523359 TCEAL1Q15170 157 aa7.42□□□□□ -1.22
SKP1-211ENST00000523359 ANKRD39Q53RE8 183 aa7.42□□□□□ -1.22
SKP1-211ENST00000523359 FYB2Q5VWT5 728 aa7.42□□□□□ -1.22
SKP1-211ENST00000523359 EEPD1Q7L9B9 569 aa7.42□□□□□ -1.22
SKP1-211ENST00000523359 TMC3Q7Z5M5 1100 aa7.42□□□□□ -1.22
SKP1-211ENST00000523359 KSR1Q8IVT5 923 aa7.42□□□□□ -1.22
SKP1-211ENST00000523359 KLHL25Q9H0H3 589 aa7.42□□□□□ -1.22
SKP1-211ENST00000523359 GP6Q9HCN6 339 aa7.42□□□□□ -1.22
SKP1-211ENST00000523359 LMCD1Q9NZU5 365 aa7.42□□□□□ -1.22
SKP1-211ENST00000523359 ANKRD34BA5PLL1 514 aa7.41□□□□□ -1.22
SKP1-211ENST00000523359 PKN1Q16512 942 aa7.41□□□□□ -1.22
SKP1-211ENST00000523359 MLANAQ16655 118 aa7.41□□□□□ -1.22
SKP1-211ENST00000523359 LRP10Q7Z4F1 713 aa7.41□□□□□ -1.22
SKP1-211ENST00000523359 ADAT2Q7Z6V5 191 aaKnown RBP7.41□□□□□ -1.22
SKP1-211ENST00000523359 PIWIL2Q8TC59 973 aaKnown RBP7.41□□□□□ -1.22
SKP1-211ENST00000523359 GFOD1Q9NXC2 390 aa7.41□□□□□ -1.22
SKP1-211ENST00000523359 ST14Q9Y5Y6 855 aa7.41□□□□□ -1.22
SKP1-211ENST00000523359 SHISA3A0PJX4 238 aa7.4□□□□□ -1.22
SKP1-211ENST00000523359 NAT2P11245 290 aa7.4□□□□□ -1.22
SKP1-211ENST00000523359 ITGA4P13612 1032 aa7.4□□□□□ -1.22
SKP1-211ENST00000523359 ZNF143P52747 638 aaPredicted RBP7.4□□□□□ -1.22
SKP1-211ENST00000523359 IFRD2Q12894 506 aaPredicted RBP7.4□□□□□ -1.22
SKP1-211ENST00000523359 SV2CQ496J9 727 aa7.4□□□□□ -1.22
SKP1-211ENST00000523359 MTERF2Q49AM1 385 aa7.4□□□□□ -1.22
SKP1-211ENST00000523359 ADCY4Q8NFM4 1077 aa7.4□□□□□ -1.22
SKP1-211ENST00000523359 BRF1Q92994 677 aa7.4□□□□□ -1.22
SKP1-211ENST00000523359 PPP1R14AQ96A00 147 aa7.4□□□□□ -1.22
SKP1-211ENST00000523359 LIN37Q96GY3 246 aaPredicted RBP7.4□□□□□ -1.22
SKP1-211ENST00000523359 APBA2Q99767 749 aa7.4□□□□□ -1.22
SKP1-211ENST00000523359 GBP3Q9H0R5 595 aa7.4□□□□□ -1.22
SKP1-211ENST00000523359 APEX2Q9UBZ4 518 aa7.4□□□□□ -1.22
SKP1-211ENST00000523359 MINPP1Q9UNW1 487 aa7.4□□□□□ -1.22
SKP1-211ENST00000523359 SUGT1Q9Y2Z0 365 aa7.4□□□□□ -1.22
SKP1-211ENST00000523359 AFMP43652 599 aa7.39□□□□□ -1.23
SKP1-211ENST00000523359 ZNF445P59923 1031 aa7.39□□□□□ -1.23
SKP1-211ENST00000523359 MESP2Q0VG99 397 aa7.39□□□□□ -1.23
SKP1-211ENST00000523359 NMIQ13287 307 aaPredicted RBP7.39□□□□□ -1.23
SKP1-211ENST00000523359 SLC10A6Q3KNW5 377 aa7.39□□□□□ -1.23
SKP1-211ENST00000523359 NOL9Q5SY16 702 aaKnown RBP7.39□□□□□ -1.23
SKP1-211ENST00000523359 GIMAP6Q6P9H5 292 aa7.39□□□□□ -1.23
SKP1-211ENST00000523359 SPATC1Q76KD6 591 aa7.39□□□□□ -1.23
SKP1-211ENST00000523359 ST13P5Q8NFI4 369 aaPredicted RBP7.39□□□□□ -1.23
SKP1-211ENST00000523359 UBE2FQ969M7 185 aa7.39□□□□□ -1.23
SKP1-211ENST00000523359 DNAJC7Q99615 494 aa7.39□□□□□ -1.23
SKP1-211ENST00000523359 SLC38A3Q99624 504 aa7.39□□□□□ -1.23
SKP1-211ENST00000523359 ASCC2Q9H1I8 757 aaPredicted RBP7.39□□□□□ -1.23
SKP1-211ENST00000523359 C19orf73Q9NVV2 129 aa7.39□□□□□ -1.23
SKP1-211ENST00000523359 WHRNQ9P202 907 aa7.39□□□□□ -1.23
SKP1-211ENST00000523359 ZSWIM5Q9P217 1185 aa7.39□□□□□ -1.23
SKP1-211ENST00000523359 PFDN2Q9UHV9 154 aa7.39□□□□□ -1.23
SKP1-211ENST00000523359 LOC105371045A0A1W2PR82 267 aa7.38□□□□□ -1.23
SKP1-211ENST00000523359 DBX1A6NMT0 343 aa7.38□□□□□ -1.23
SKP1-211ENST00000523359 WASH4PA8MWX3 477 aa7.38□□□□□ -1.23
SKP1-211ENST00000523359 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.38□□□□□ -1.23
SKP1-211ENST00000523359 MEIS1O00470 390 aa7.38□□□□□ -1.23
SKP1-211ENST00000523359 SIGLEC6O43699 453 aa7.38□□□□□ -1.23
SKP1-211ENST00000523359 PRAMEF1O95521 474 aa7.38□□□□□ -1.23
SKP1-211ENST00000523359 SRFP11831 508 aa7.38□□□□□ -1.23
SKP1-211ENST00000523359 CLEC16AQ2KHT3 1053 aa7.38□□□□□ -1.23
SKP1-211ENST00000523359 NOP9Q86U38 636 aaKnown RBP7.38□□□□□ -1.23
SKP1-211ENST00000523359 ZNF513Q8N8E2 541 aaPredicted RBP7.38□□□□□ -1.23
SKP1-211ENST00000523359 KIRREL1Q96J84 757 aa7.38□□□□□ -1.23
SKP1-211ENST00000523359 FAM84AQ96KN4 292 aa7.38□□□□□ -1.23
SKP1-211ENST00000523359 LGR4Q9BXB1 951 aa7.38□□□□□ -1.23
SKP1-211ENST00000523359 GPR62Q9BZJ7 368 aa7.38□□□□□ -1.23
SKP1-211ENST00000523359 DUSP15Q9H1R2 295 aaPredicted RBP7.38□□□□□ -1.23
SKP1-211ENST00000523359 EPN3Q9H201 632 aa7.38□□□□□ -1.23
SKP1-211ENST00000523359 CHST7Q9NS84 486 aa7.38□□□□□ -1.23
SKP1-211ENST00000523359 FAM53CQ9NYF3 392 aa7.38□□□□□ -1.23
SKP1-211ENST00000523359 ZMYM5Q9UJ78 669 aa7.38□□□□□ -1.23
SKP1-211ENST00000523359 PPM1BO75688 479 aa7.37□□□□□ -1.23
SKP1-211ENST00000523359 DSCC1Q9BVC3 393 aa7.37□□□□□ -1.23
SKP1-211ENST00000523359 HDAC8Q9BY41 377 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms