RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 RNF180Q86T96 592 aa9.44□□□□□ -0.9
GM2A-202ENST00000523004 MSL3Q8N5Y2 521 aaKnown RBP9.44□□□□□ -0.9
GM2A-202ENST00000523004 PRDM5Q9NQX1 630 aaPredicted RBP9.44□□□□□ -0.9
GM2A-202ENST00000523004 ECHDC1Q9NTX5 307 aa9.44□□□□□ -0.9
GM2A-202ENST00000523004 TACC3Q9Y6A5 838 aa9.44□□□□□ -0.9
GM2A-202ENST00000523004 DNAJC25-GNG10A0A024R161 153 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 F5H6K3 240 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 ATP2A1O14983 1001 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 RAD21O60216 631 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 ADAMTS4O75173 837 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 NDUFB10O96000 172 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 AKR1A1P14550 325 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 ITGB8P26012 769 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 SMAD3P84022 425 aaKnown RBP9.43□□□□□ -0.9
GM2A-202ENST00000523004 KLRC3Q07444 240 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 ZNF697Q5TEC3 545 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 MAMDC4Q6UXC1 1216 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 KBTBD3Q8NAB2 608 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 PRPF38AQ8NAV1 312 aaKnown RBP9.43□□□□□ -0.9
GM2A-202ENST00000523004 OSBP2Q969R2 916 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 FAM161BQ96MY7 647 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 NUP88Q99567 741 aaPredicted RBP9.43□□□□□ -0.9
GM2A-202ENST00000523004 SLF1Q9BQI6 1058 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 TSEN34Q9BSV6 310 aaKnown RBP9.43□□□□□ -0.9
GM2A-202ENST00000523004 TEX13BQ9BXU2 312 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 MKNK2Q9HBH9 465 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 CNPY2Q9Y2B0 182 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 RIPK3Q9Y572 518 aa9.43□□□□□ -0.9
GM2A-202ENST00000523004 SYNGAP1Q96PV0 1343 aa9.42□□□□□ -0.9
GM2A-202ENST00000523004 IGKV6D-41A0A0C4DH26 115 aa9.42□□□□□ -0.9
GM2A-202ENST00000523004 A0A1W2PQ45 241 aaPredicted RBP9.42□□□□□ -0.9
GM2A-202ENST00000523004 A0A1W2PQY0 241 aa9.42□□□□□ -0.9
GM2A-202ENST00000523004 KIAA0355O15063 1070 aa9.42□□□□□ -0.9
GM2A-202ENST00000523004 SNAI1O95863 264 aaPredicted RBP9.42□□□□□ -0.9
GM2A-202ENST00000523004 ZFYP08048 801 aaPredicted RBP9.42□□□□□ -0.9
GM2A-202ENST00000523004 CLTBP09497 229 aa9.42□□□□□ -0.9
GM2A-202ENST00000523004 C20orf194Q5TEA3 1177 aa9.42□□□□□ -0.9
GM2A-202ENST00000523004 SNRNP48Q6IEG0 339 aaKnown RBP9.42□□□□□ -0.9
GM2A-202ENST00000523004 CCSAPQ6IQ19 270 aaPredicted RBP9.42□□□□□ -0.9
GM2A-202ENST00000523004 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.42□□□□□ -0.9
GM2A-202ENST00000523004 ANKRD33Q7Z3H0 272 aa9.42□□□□□ -0.9
GM2A-202ENST00000523004 ZNF467Q7Z7K2 595 aaPredicted RBP9.42□□□□□ -0.9
GM2A-202ENST00000523004 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.42□□□□□ -0.9
GM2A-202ENST00000523004 KLHDC9Q8NEP7 349 aa9.42□□□□□ -0.9
GM2A-202ENST00000523004 APPBP2Q92624 585 aa9.42□□□□□ -0.9
GM2A-202ENST00000523004 MKL1Q969V6 931 aa9.42□□□□□ -0.9
GM2A-202ENST00000523004 LENG1Q96BZ8 264 aaPredicted RBP9.42□□□□□ -0.9
GM2A-202ENST00000523004 DDX11Q96FC9 970 aa9.42□□□□□ -0.9
GM2A-202ENST00000523004 TOX2Q96NM4 488 aa9.42□□□□□ -0.9
GM2A-202ENST00000523004 CDX2Q99626 313 aaPredicted RBP9.42□□□□□ -0.9
GM2A-202ENST00000523004 SEMA6BQ9H3T3 888 aa9.42□□□□□ -0.9
GM2A-202ENST00000523004 EPB41L4AQ9HCS5 686 aaPredicted RBP9.42□□□□□ -0.9
GM2A-202ENST00000523004 CLIP2Q9UDT6 1046 aa9.42□□□□□ -0.9
GM2A-202ENST00000523004 SYNRGQ9UMZ2 1314 aa9.41□□□□□ -0.9
GM2A-202ENST00000523004 MINDY4BA8MYZ0 360 aa9.41□□□□□ -0.9
GM2A-202ENST00000523004 RNF113AO15541 343 aaKnown RBP9.41□□□□□ -0.9
GM2A-202ENST00000523004 GPAA1O43292 621 aa9.41□□□□□ -0.9
GM2A-202ENST00000523004 GNAT2P19087 354 aa9.41□□□□□ -0.9
GM2A-202ENST00000523004 ACLYP53396 1101 aa9.41□□□□□ -0.9
GM2A-202ENST00000523004 EPHB4P54760 987 aa9.41□□□□□ -0.9
GM2A-202ENST00000523004 RRP1P56182 461 aaKnown RBP9.41□□□□□ -0.9
GM2A-202ENST00000523004 FAAP100Q0VG06 881 aa9.41□□□□□ -0.9
GM2A-202ENST00000523004 STK11IPQ8N1F8 1099 aa9.41□□□□□ -0.9
GM2A-202ENST00000523004 COL25A1Q9BXS0 654 aaPredicted RBP9.41□□□□□ -0.9
GM2A-202ENST00000523004 TTYH1Q9H313 450 aaPredicted RBP9.41□□□□□ -0.9
GM2A-202ENST00000523004 DCTPP1Q9H773 170 aa9.41□□□□□ -0.9
GM2A-202ENST00000523004 SLC38A10Q9HBR0 1119 aa9.41□□□□□ -0.9
GM2A-202ENST00000523004 MTMR4Q9NYA4 1195 aa9.41□□□□□ -0.9
GM2A-202ENST00000523004 FEM1BQ9UK73 627 aa9.41□□□□□ -0.9
GM2A-202ENST00000523004 FAM184BQ9ULE4 1060 aa9.41□□□□□ -0.9
GM2A-202ENST00000523004 SYNPO2Q9UMS6 1093 aa9.41□□□□□ -0.9
GM2A-202ENST00000523004 TTC28Q96AY4 2481 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 MOXD2PA6NHM9 499 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 DCDC2CA8MYV0 355 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 PATL2C9JE40 543 aaKnown RBP9.4□□□□□ -0.9
GM2A-202ENST00000523004 PQBP1O60828 265 aaKnown RBP9.4□□□□□ -0.9
GM2A-202ENST00000523004 ZBED4O75132 1171 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 DUSP11O75319 330 aaKnown RBP9.4□□□□□ -0.9
GM2A-202ENST00000523004 PRDM1O75626 825 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 RAG1P15918 1043 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 CST5P28325 142 aaPredicted RBP9.4□□□□□ -0.9
GM2A-202ENST00000523004 TDO2P48775 406 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 OAZ1P54368 228 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 KCNA10Q16322 511 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 TSHZ3Q63HK5 1081 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 ZNF444Q8N0Y2 327 aaPredicted RBP9.4□□□□□ -0.9
GM2A-202ENST00000523004 CPXCR1Q8N123 301 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 GMCL1P1Q8NEA9 526 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 NUP133Q8WUM0 1156 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 KIFC2Q96AC6 838 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 CEP95Q96GE4 821 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 GPATCH3Q96I76 525 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 FGD4Q96M96 766 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 ABHD16BQ9H3Z7 469 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 ZNF287Q9HBT7 754 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 RAVER2Q9HCJ3 691 aaKnown RBP9.4□□□□□ -0.9
GM2A-202ENST00000523004 STARD7Q9NQZ5 370 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 TMEM39AQ9NV64 488 aa9.4□□□□□ -0.9
GM2A-202ENST00000523004 PLIN4Q96Q06 1357 aa9.39□□□□□ -0.91
GM2A-202ENST00000523004 ELP1O95163 1332 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms