RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 DDX11Q96FC9 970 aa18.42■□□□□ 0.54
MRPS28-209ENST00000522987 CEP95Q96GE4 821 aa18.42■□□□□ 0.54
MRPS28-209ENST00000522987 NYAP2Q9P242 653 aa18.42■□□□□ 0.54
MRPS28-209ENST00000522987 ZHX1Q9UKY1 873 aaPredicted RBP18.42■□□□□ 0.54
MRPS28-209ENST00000522987 CTDP1Q9Y5B0 961 aaPredicted RBP18.42■□□□□ 0.54
MRPS28-209ENST00000522987 PCDHB15Q9Y5E8 787 aa18.42■□□□□ 0.54
MRPS28-209ENST00000522987 ZNF865P0CJ78 1059 aaPredicted RBP18.41■□□□□ 0.54
MRPS28-209ENST00000522987 TLE2Q04725 743 aa18.41■□□□□ 0.54
MRPS28-209ENST00000522987 GPR153Q6NV75 609 aa18.41■□□□□ 0.54
MRPS28-209ENST00000522987 IFNL3Q8IZI9 196 aa18.41■□□□□ 0.54
MRPS28-209ENST00000522987 FSD1Q9BTV5 496 aa18.41■□□□□ 0.54
MRPS28-209ENST00000522987 TEX13BQ9BXU2 312 aa18.41■□□□□ 0.54
MRPS28-209ENST00000522987 IGKV6D-41A0A0C4DH26 115 aa18.4■□□□□ 0.54
MRPS28-209ENST00000522987 PQBP1O60828 265 aaKnown RBP18.4■□□□□ 0.54
MRPS28-209ENST00000522987 GIMAP6Q6P9H5 292 aa18.4■□□□□ 0.54
MRPS28-209ENST00000522987 CCDC129Q6ZRS4 1044 aa18.4■□□□□ 0.54
MRPS28-209ENST00000522987 HOMER2Q9NSB8 354 aa18.4■□□□□ 0.54
MRPS28-209ENST00000522987 CNPY2Q9Y2B0 182 aa18.4■□□□□ 0.54
MRPS28-209ENST00000522987 A0A1W2PQ45 241 aaPredicted RBP18.39■□□□□ 0.53
MRPS28-209ENST00000522987 A0A1W2PQY0 241 aa18.39■□□□□ 0.53
MRPS28-209ENST00000522987 PATL2C9JE40 543 aaKnown RBP18.39■□□□□ 0.53
MRPS28-209ENST00000522987 ZBED4O75132 1171 aa18.39■□□□□ 0.53
MRPS28-209ENST00000522987 ZFYP08048 801 aaPredicted RBP18.39■□□□□ 0.53
MRPS28-209ENST00000522987 ITGB8P26012 769 aa18.39■□□□□ 0.53
MRPS28-209ENST00000522987 SNX17Q15036 470 aa18.39■□□□□ 0.53
MRPS28-209ENST00000522987 RNF180Q86T96 592 aa18.39■□□□□ 0.53
MRPS28-209ENST00000522987 PRPF38AQ8NAV1 312 aaKnown RBP18.39■□□□□ 0.53
MRPS28-209ENST00000522987 INCENPQ9NQS7 918 aa18.39■□□□□ 0.53
MRPS28-209ENST00000522987 PHF24Q9UPV7 400 aa18.39■□□□□ 0.53
MRPS28-209ENST00000522987 MTMR7Q9Y216 660 aa18.39■□□□□ 0.53
MRPS28-209ENST00000522987 STXBP5LQ9Y2K9 1186 aa18.39■□□□□ 0.53
MRPS28-209ENST00000522987 LAMA2P24043 3122 aaKnown RBP18.39■□□□□ 0.53
MRPS28-209ENST00000522987 MYADML2A6NDP7 307 aa18.38■□□□□ 0.53
MRPS28-209ENST00000522987 SNAI1O95863 264 aaPredicted RBP18.38■□□□□ 0.53
MRPS28-209ENST00000522987 TSPY3P0CV98 308 aa18.38■□□□□ 0.53
MRPS28-209ENST00000522987 TSPY8P0CW00 308 aa18.38■□□□□ 0.53
MRPS28-209ENST00000522987 AKR1A1P14550 325 aa18.38■□□□□ 0.53
MRPS28-209ENST00000522987 GNAT2P19087 354 aa18.38■□□□□ 0.53
MRPS28-209ENST00000522987 COPB2P35606 906 aa18.38■□□□□ 0.53
MRPS28-209ENST00000522987 SNAP25P60880 206 aa18.38■□□□□ 0.53
MRPS28-209ENST00000522987 SLFN13Q68D06 897 aa18.38■□□□□ 0.53
MRPS28-209ENST00000522987 RASGRP2Q7LDG7 609 aa18.38■□□□□ 0.53
MRPS28-209ENST00000522987 PI4K2BQ8TCG2 481 aa18.38■□□□□ 0.53
MRPS28-209ENST00000522987 GUCD1Q96NT3 240 aa18.38■□□□□ 0.53
MRPS28-209ENST00000522987 NAPBQ9H115 298 aa18.38■□□□□ 0.53
MRPS28-209ENST00000522987 MTMR4Q9NYA4 1195 aa18.38■□□□□ 0.53
MRPS28-209ENST00000522987 DIS3Q9Y2L1 958 aaKnown RBP18.38■□□□□ 0.53
MRPS28-209ENST00000522987 TFAP4Q01664 338 aa18.37■□□□□ 0.53
MRPS28-209ENST00000522987 CTDSPL2Q05D32 466 aa18.37■□□□□ 0.53
MRPS28-209ENST00000522987 IKQ13123 557 aaPredicted RBP18.37■□□□□ 0.53
MRPS28-209ENST00000522987 ANKRD35Q8N283 1001 aa18.37■□□□□ 0.53
MRPS28-209ENST00000522987 SYNRGQ9UMZ2 1314 aa18.37■□□□□ 0.53
MRPS28-209ENST00000522987 LCTP09848 1927 aa18.37■□□□□ 0.53
MRPS28-209ENST00000522987 TMEM232C9JQI7 657 aa18.36■□□□□ 0.53
MRPS28-209ENST00000522987 POTEB2H3BUK9 544 aa18.36■□□□□ 0.53
MRPS28-209ENST00000522987 ADCY6O43306 1168 aa18.36■□□□□ 0.53
MRPS28-209ENST00000522987 ADAMTS4O75173 837 aa18.36■□□□□ 0.53
MRPS28-209ENST00000522987 TTLL1O95922 423 aa18.36■□□□□ 0.53
MRPS28-209ENST00000522987 CLTBP09497 229 aa18.36■□□□□ 0.53
MRPS28-209ENST00000522987 EPHB4P54760 987 aa18.36■□□□□ 0.53
MRPS28-209ENST00000522987 PPARAQ07869 468 aa18.36■□□□□ 0.53
MRPS28-209ENST00000522987 NACAP1Q9BZK3 213 aa18.36■□□□□ 0.53
MRPS28-209ENST00000522987 NRBP1Q9UHY1 535 aa18.36■□□□□ 0.53
MRPS28-209ENST00000522987 DDX49Q9Y6V7 483 aaKnown RBP18.36■□□□□ 0.53
MRPS28-209ENST00000522987 LRRC37A2A6NM11 1700 aa18.35■□□□□ 0.53
MRPS28-209ENST00000522987 TTC41PQ6P2S7 1318 aa18.35■□□□□ 0.53
MRPS28-209ENST00000522987 DNAJC25-GNG10A0A024R161 153 aa18.35■□□□□ 0.53
MRPS28-209ENST00000522987 ERC2O15083 957 aa18.35■□□□□ 0.53
MRPS28-209ENST00000522987 NMT2O60551 498 aa18.35■□□□□ 0.53
MRPS28-209ENST00000522987 BMP3P12645 472 aa18.35■□□□□ 0.53
MRPS28-209ENST00000522987 CNTN2Q02246 1040 aa18.35■□□□□ 0.53
MRPS28-209ENST00000522987 KCNA10Q16322 511 aa18.35■□□□□ 0.53
MRPS28-209ENST00000522987 ZMYM1Q5SVZ6 1142 aa18.35■□□□□ 0.53
MRPS28-209ENST00000522987 ZNF697Q5TEC3 545 aa18.35■□□□□ 0.53
MRPS28-209ENST00000522987 NEDD1Q8NHV4 660 aa18.35■□□□□ 0.53
MRPS28-209ENST00000522987 FGD4Q96M96 766 aa18.35■□□□□ 0.53
MRPS28-209ENST00000522987 SLC38A10Q9HBR0 1119 aa18.35■□□□□ 0.53
MRPS28-209ENST00000522987 ZNF287Q9HBT7 754 aa18.35■□□□□ 0.53
MRPS28-209ENST00000522987 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.35■□□□□ 0.53
MRPS28-209ENST00000522987 FEM1BQ9UK73 627 aa18.35■□□□□ 0.53
MRPS28-209ENST00000522987 FAM184BQ9ULE4 1060 aa18.35■□□□□ 0.53
MRPS28-209ENST00000522987 RAG1P15918 1043 aa18.34■□□□□ 0.53
MRPS28-209ENST00000522987 MX1P20591 662 aa18.34■□□□□ 0.53
MRPS28-209ENST00000522987 MCCP23508 829 aa18.34■□□□□ 0.53
MRPS28-209ENST00000522987 ACLYP53396 1101 aa18.34■□□□□ 0.53
MRPS28-209ENST00000522987 PDE4BQ07343 736 aa18.34■□□□□ 0.53
MRPS28-209ENST00000522987 LRRFIP1Q32MZ4 808 aaKnown RBP18.34■□□□□ 0.53
MRPS28-209ENST00000522987 CCDC174Q6PII3 467 aa18.34■□□□□ 0.53
MRPS28-209ENST00000522987 KCTD1Q719H9 257 aa18.34■□□□□ 0.53
MRPS28-209ENST00000522987 MKL1Q969V6 931 aa18.34■□□□□ 0.53
MRPS28-209ENST00000522987 AGBL1Q96MI9 1066 aa18.34■□□□□ 0.53
MRPS28-209ENST00000522987 STARD7Q9NQZ5 370 aa18.34■□□□□ 0.53
MRPS28-209ENST00000522987 TMEM39AQ9NV64 488 aa18.34■□□□□ 0.53
MRPS28-209ENST00000522987 TACC3Q9Y6A5 838 aa18.34■□□□□ 0.53
MRPS28-209ENST00000522987 SYNGAP1Q96PV0 1343 aa18.33■□□□□ 0.53
MRPS28-209ENST00000522987 FOXP2O15409 715 aa18.33■□□□□ 0.52
MRPS28-209ENST00000522987 C6orf222P0C671 652 aaPredicted RBP18.33■□□□□ 0.52
MRPS28-209ENST00000522987 PTGS1P23219 599 aa18.33■□□□□ 0.52
MRPS28-209ENST00000522987 ACVR2BQ13705 512 aa18.33■□□□□ 0.52
MRPS28-209ENST00000522987 ARMCX2Q7L311 632 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms